Rattus norvegicus (rat): 304579
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Entry
304579 CDS
T01003
Symbol
Usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
304579 (Usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rno01002
]
304579 (Usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
304579 (Usp30)
04121 Ubiquitin system [BR:
rno04121
]
304579 (Usp30)
Enzymes [BR:
rno01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
304579 (Usp30)
Peptidases and inhibitors [BR:
rno01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
304579 (Usp30)
Membrane trafficking [BR:
rno04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
304579 (Usp30)
Ubiquitin system [BR:
rno04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
304579 (Usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
304579
NCBI-ProteinID:
NP_001100623
RGD:
1307949
Ensembl:
ENSRNOG00000028556
UniProt:
D3ZPG5
LinkDB
All DBs
Position
12:complement(48161905..48215878)
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AA seq
517 aa
AA seq
DB search
MLSSRAQAARTAADKALQRFLRTGAAVRYKVMKNWGVIGGIAAALAAGIYVIWGPITERK
KRRKGLVPGLVNLGNTCFMNSLLQGLSACPAFVKWLEEFTTQYSRDQQGPHTHQCLSLTL
LSLLKALSCQEVTEEEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQ
PRVTHLFDVHSLEQQSEMAPRQVTCHTRGSPHPTTNPWKSQHPFHGRLSSNMVCKHCEHQ
SPVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTQNGEK
VEHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSQGTPLKRHEHVQFNEFLMMDFYKYRLLG
HKPSQHGPKATESPGSALGVQDTQAAPKPGLSQPAAPKTQFFMNGACSPSLLPALPSPMA
FPLPVAPDYSSSMYLFRLMAVVVHHGDMHSGHFVTYRRSPPSAKNPLSTSNQWLWISDDT
VRKASLQEVLSSSAYLLFYERVLSRVQQQGREYRSEE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgctgagttcccgggcgcaggcggcgaggacagcggccgacaaggccctccagcgcttc
ctgcgcaccggggcggctgtcagatacaaagtcatgaagaactggggagtgatcggtgga
attgctgctgctcttgcagcaggaatatatgttatctggggtcccattacagagaggaag
aagcggagaaaagggcttgtgcctggccttgtcaacttggggaacacctgcttcatgaac
tccctgctgcagggtttgtctgcctgccccgcgtttgtcaagtggctggaggagtttacc
acccagtactccagggaccagcaggggccgcacacacaccagtgcctgtccttgacactg
ctgagcctcctgaaagctctgtcctgccaagaagtcactgaggaagaggtcttggacgcc
agctgcctgctggacgtcctgagaatgtaccggtggcagatctcgtcctttgaggagcag
gatgctcacgaactgttccatgtcatcacctcatccctggaggacgagcgggaccgccag
cctcgggtcacccacttgtttgatgtgcactccctggagcagcagtcagaaatggctccc
agacaagtcacctgccacacgagagggtcccctcaccccacgaccaatccctggaagtct
cagcaccccttccatgggaggctcagcagtaacatggtgtgcaagcactgtgagcaccag
agccctgttcggtttgacacctttgatagcctttccctcagtattccagctgctacttgg
gggcacccactgacactggaccactgccttcaccacttcatctcatccgagtcggtgcga
gacgttgtgtgtgacaactgtacaaagattgaagcaaaagggacccagaacggggaaaag
gtggagcaccagaggaccactttcgttaaacagttaaagctaggaaagctgccacagtgc
ctctgcatccacctgcagcggctcagctggtccagccaaggcacgcccttgaagcggcat
gagcacgtgcaatttaacgagttcctgatgatggacttctacaagtaccgcctcctggga
cataaacccagccagcatggccccaaagccactgagagcccagggtctgccctgggagta
caggacacacaggcggccccgaagccaggtctgagtcagccagcggcccccaagacacag
ttttttatgaatggcgcctgctccccgtctttgttgccagccctgccttctccgatggct
ttccctctaccagtggctcctgactacagctcctccatgtacctcttccgcttgatggca
gttgtcgtccaccatggagacatgcactctggacactttgtcacctacagacggtcacca
ccttctgccaagaaccctctctcaaccagcaaccagtggctgtggatttccgatgacact
gtccgaaaggccagcctgcaggaggtcctgtcctctagtgcctacctgctgttctatgag
cgagttctgtccagggtgcagcagcaggggcgagagtacaggtcagaggagtga
DBGET
integrated database retrieval system