Rattus norvegicus (rat): 304719
Help
Entry
304719 CDS
T01003
Symbol
Ercc4
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03420
Nucleotide excision repair
rno03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
304719 (Ercc4)
03460 Fanconi anemia pathway
304719 (Ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rno03032
]
304719 (Ercc4)
03400 DNA repair and recombination proteins [BR:
rno03400
]
304719 (Ercc4)
DNA replication proteins [BR:
rno03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
304719 (Ercc4)
DNA repair and recombination proteins [BR:
rno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
304719 (Ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Motif
Other DBs
NCBI-GeneID:
304719
NCBI-ProteinID:
XP_038942942
RGD:
1560340
Ensembl:
ENSRNOG00000070542
UniProt:
D3ZT95
LinkDB
All DBs
Position
10:complement(2926085..2958176)
Genome browser
AA seq
917 aa
AA seq
DB search
MERGLPGERQSMAPLLEYERQQVLELLDSDGLVVCARGLGADRLLYHFLRLHCHPACLVL
VLNTQPAEEEYFINQLKIEGVEHLPRRVTNEIASNSRYEVYTQGGIIFATSRILVVDFLT
GRIPSDLITGILVYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVER
VMRNLFVKKLYLWPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDVLNACLKEL
KYHNPSLEVEDLSLENALGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQ
YDCVTFLNLLESLRATEKVFGQNSGWLFLDASTSMFVNARARVYRVPDVKLSKKTKTSEK
MAGPEEQETKKELVLESNPKWEALTEVLKEIETENKESEALGGPGQVLICASDDRTCCQL
RDYLTAGAEAFLLRLYRKTFEKDGKAEEVWVNFRKGDGPKRTMKSDKRPKDAQNKERAST
KRGALKRKKKRELTLTQVLGTAEEPPEEGAVEEDLHKQTGSSPEVCGGEIQHESFDLNVS
SDAAYGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRASRP
GKPLRVYFFVYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVPEEREGRDETNLDLARG
TAAMDTPTDTRKAGGQERNGTQPSIVVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILT
PELCVERKSVSDLIGSLHSGRLYSQCLAMSRYYRRPVLLIEFDPSKPFSLAPRGAFVQEM
SSSDVSSKLTLLTLHFPRLRLLWCPSPHATAELFEELKQNKPQPDAATAMAITADSETLP
ESDRYNPGPQDFVLKMPGVNAKNCRSLMNQVQNIAELATLSLERLTGILGHSGNAKQLHD
FLHTAYADLVSKGRVRK
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggagcggggcctgccgggcgaacgccagagtatggcgcctctgttggagtacgagagg
cagcaggtgctggaactgctcgacagcgacgggctggtggtgtgcgcccgcgggctcggc
gccgaccggctcctctaccatttcctgcggcttcactgccaccctgcctgcctggtgctg
gtgctcaacacgcagcctgccgaggaggagtactttatcaatcagttgaagatcgaagga
gttgaacacctccctcgacgggtgacaaatgaaatcgcaagtaacagtcgctatgaagtc
tatacgcagggcggtattatatttgcaacaagtcgaatactcgtggttgatttcttgact
ggcagaataccttcagatttaataactggcatcctcgtgtacagagcacacaggatcatt
gagtcttgccaggaagccttcattctgcgcctcttccgccagaaaaacaaacgtggcttc
atcaaagctttcaccgacaacgctgttgcctttgacactggcttttgtcacgtggaaaga
gtgatgaggaaccttttcgtgaagaagctctacctgtggccaaggttccatgtagcagtc
aactcattcttggaacaacacaagcctgaagtcgtagagattcacgtgtccatgactccg
gccatgcttgccatccagacagccatactggacgtcttaaacgcgtgtctgaaggaactt
aagtaccacaacccgtcgctagaagtagaagacttgtcgttagaaaatgctctggggaag
ccattcgacaagacaatccgccattacttggaccctttgtggcatcagcttggagccaag
actaaatccttggtgcaggatttgaagatactaagaacgttactgcagtatctctctcag
tacgactgtgttacttttctaaatcttctggaatctctgagagcaacagagaaggtgttt
ggtcagaattcaggttggcttttcctggatgctagcacctccatgttcgtgaatgctcgt
gcccgagtttaccgtgtcccagatgtcaaactgagcaaaaagaccaaaacatcggagaag
atggcaggtccagaagagcaagaaacaaaaaaagaactggtcctagaaagcaatccaaag
tgggaagcgctgactgaagtcctgaaagaaatcgaaacagaaaataaggagagtgaagcc
cttggtggcccaggccaggtgctgatctgtgcgagcgatgaccgcacatgttgccagctc
agagactacctgactgctggcgcagaagccttcctactgcggctctacaggaaaaccttc
gagaaggacggcaaagctgaagaagtatgggtaaattttagaaagggagatggcccaaag
agaactatgaaatctgacaaaagacccaaagatgcccaaaacaaagagcgtgcttccacc
aaaaggggtgctctcaaaaggaagaagaagcgagagctgactctgacgcaagtgttgggg
actgctgaggagccgccagaggaaggggctgtggaggaagacctgcacaaacagaccgga
agtagcccagaagtctgcgggggagagattcagcatgaatcatttgatttaaacgtgtca
tctgatgcagcctatggcatactgaaagagcccctgaccatcatccatccgcttctggga
tgcagcgacccctatgccctgacacgagtactgcacgaggtggagcctagatacgtggtt
ctgtatgatgcagagctcacttttgttcggcagctggagatctacagggccagcaggcct
gggaaacctctgagggtttacttttttgtatatggaggctccacagaagagcagcgctac
ctgactgctctgcgcaaagaaaaggaagcgtttgaaaagctcataagggaaaaagctagc
atggttgtccctgaagaacgggaaggcagagatgaaaccaacctggacctggcaagaggc
acagcagccatggacactcccactgacactcggaaagctggtggccaggagcggaacggc
acacagcccagcatcgtggtggacatgcgtgagtttcggagcgagctcccatctctaatc
catcggaggggcattgacatagagccagtgactctggaagtgggtgattacatcctgaca
cctgagctttgtgtggagcgcaaaagtgtgagcgacctcattggctcgctgcatagtggc
cgcctatacagccagtgcctagccatgtcccgctactaccggaggcctgtgctactcatc
gagtttgacccgagcaagcccttctccctggcaccacggggtgccttcgtccaggagatg
agcagcagtgatgtgagctctaagctcacactcctcaccttgcacttcccacgcctgcgg
ctgctctggtgcccctcgccccatgccacagccgagctgtttgaggagctgaagcagaac
aagccacaacctgatgcggccacagccatggccatcaccgcagactcagagacgctacct
gagtcagacaggtataaccctggcccccaagattttgtgctaaagatgcctggggtcaat
gccaagaactgtcgctccctgatgaatcaagtgcagaacatcgcagagctggccaccctg
tccctggagcgactcacgggtatcctggggcactcgggaaatgccaagcagctgcatgac
ttcctgcacactgcctatgcagacttggtgtccaaaggcagagtgagaaagtga
DBGET
integrated database retrieval system
