Rattus norvegicus (rat): 304740
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Entry
304740 CDS
T01003
Symbol
Clasp1
Name
(RefSeq) CLIP-associating protein 1 isoform X19
KO
K16578
CLIP-associating protein 1/2
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
304740 (Clasp1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rno04812
]
304740 (Clasp1)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
304740 (Clasp1)
Cytoskeleton proteins [BR:
rno04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
304740 (Clasp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
HEAT_2
Cnd1
RTP1_C1
HEAT_DAAF5
MMS19_N
ParcG
TAN
MMS19_C
Motif
Other DBs
NCBI-GeneID:
304740
NCBI-ProteinID:
XP_038947191
RGD:
1310970
Ensembl:
ENSRNOG00000002376
LinkDB
All DBs
Position
13:32046362..32267954
Genome browser
AA seq
1507 aa
AA seq
DB search
MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN
SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN
FDDEDSVDGNRPSSASSSSSKAPSSSRRNVSMGTTRRLMASSLGSKSSAAKEGAGAVDEE
DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTASRGSTVSTKSMSTTGSLQRSRS
DIDVNAAASAKSKVSSSSGSTAFSSAAALPPGSYASLGRIRTRRQSSGSTTNVASTSSDS
RGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLAGGSSRGPPVTPSSEKRSK
IPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFTPLDRFGLG
QSGRIPGSVSAMRVLSTSTDLEAAVADALLLGDARSKKKPVRRRYEPYGMYSDDDANSDA
SSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSR
VELKRLCEIFTRMFADPHSKVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLL
GSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPT
DFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDG
ATKLLHNHLKNSSNAGVGSPSNTIGRTPSRHPSSRTSPLTSPTNCSHGGLSPSMLDYDTE
NLNSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDIVSRDGGAASPATEGRGG
SEVEGGRMALDNKTSLLNTQPPRAFPGPRAREYNPYPYSDTINTYDKTALKEAVFDDDME
QLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLL
LETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAA
STLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVVERITKESLLQLLVDIIPGLLQ
GYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSS
SDVSTHS
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atggaaccacgaatggagtcctgtctggcccaggtgctgcagaaggatgtggggaagcgg
ctgcaagttggccaggaactcatagactatttctcagacaaacagaagtctgctgacctt
gagcatgaccagaccatgttagataagcttgtggatggactcgctacctcttgggtgaac
tctagcaattacaaggtggttctcttgggcatggacatcctgtcggcattggtgactagg
ctgcaggaccggttcaaggcgcaaatcggcacagtgttgccaagtctaatagacagactg
ggagatgctaaggactccgtgagggagcaagaccaaactctgctgctaaagatcatggat
caagctgctaatccccagtatgtgtgggacagaatgctcggaggcttcaaacacaagaac
ttccgcacacgagagggcatctgcctctgccttattgcaacactcaatgcctctggggcc
cagactctaacactaagcaagatcgtgccacatatatgtaacctactgggagatcccaac
agccaggttcgagatgcagcaataaacagtctggtggagatttatagacatgtaggtgaa
cgtgtgagggcagacctcagtaagaaaggactgccacagtcccggttgaatgtcattttt
acaaaatttgatgaagtccaaaagtctggaaatatgatacagtctgcaaatgataaaaat
tttgatgatgaagattctgtggatggcaacaggccttcttctgccagctcctcatcgtcc
aaggctccatcaagttcccggaggaatgttagcatggggaccacccgtaggctcatggca
tccagtcttggatcgaagtcttcagctgcaaaagaaggtgcgggtgctgtggatgaagag
gattttattaaagccttcgatgatgtacctgtagtgcagatttactccagccgagatctc
gaggaatccataaacaaaattagagaaattctatcagatgacaaacatgattgggagcag
agagtaaatgctctaaaaaagattagatcgttactcttggctggggcggctgagtacgat
aacttctttcaacacttgcgtcttctggacggagcctttaaactctctgctaaggacctg
cggtctcaggtagtgcgggaagcttgtatcaccttggggcacctgtcatcagttctggga
aataagtttgatcatggagctgaagccattatgccaactatctttaatttaatcccaaac
agtgccaaaattatggctacttctggtgttgtagccgttaggttaatcattcggcacact
cacatccctcggctgatccctgtcataaccagcaactgtacctctaagtctgtcgcagtc
agaaggcgctgttttgaatttttagatttgcttttacaagaatggcagacacattcacta
gaaagacacatatcagtattagctgagacaataaagaaaggaatacacgacgctgattct
gaagcaaggatagaagccaggaaatgctactggggtttccacagtcacttcagccgagaa
gcagagcacctgtaccacactttggagtcctcctatcagaaggccctgcagtcccacttg
aagaactcggacagcatcgtgtctctgcctcagtcagaccgatcctcttccagctctcaa
gagagtctcaaccggccactttctgccaaaagaagtcccactggcagcaccgcatccaga
ggctctacagttagtaccaagtctatgtcgacgacagggtctctccagcgatctcgaagt
gatattgatgtgaacgcagcagccagtgccaaatccaaagtctcctcatcctcaggttcc
accgccttcagctctgcagcagcgttgcctccaggatcctatgcgtcattaggtcggatc
cgcaccagacggcagagctccgggagcaccaccaatgttgcctccacatcctccgacagt
cggggccgcagtcgagccaaagtggtttcacagtctcagcgatccagatctgctaaccct
gctggtgctggcagccggtcaagttcccccgggaagcttttgggaagtggttatggtgga
ctcgctgggggctcctcaagaggcccacctgtaacaccatcttcagagaagagaagcaag
atccccaggagtcagggatgcagccgagaaacaagccctaaccggattggattagcacgg
agcagccgtatcccccgacccagcatgagtcaggggtgcagccgcgataccagccgtgag
agcagccgagatacaagccctgctcggggcttcacaccactcgatcggtttgggctgggc
cagtcaggacggatccctggttctgtgagcgccatgcgagtcttgagtaccagcacagac
ctggaagccgctgtggccgacgctctgctgttaggagacgccaggagcaagaagaagcct
gtgaggaggaggtacgagccctacggaatgtactctgatgatgacgccaacagtgatgcc
tctagcgtgtgctctgagcgctcatacggctccaggaacggtggcattccccattatctg
cggcagactgaagatgtagcagaggttctcaaccactgtgccagttccaactggtcagaa
aggaaagaggggcttctaggcctgcagaacttgctgaagagccaaagaacactgagtcga
gtagaattgaagagactgtgtgagattttcacccgaatgtttgctgaccctcacagcaag
gttttcagtatgtttttggagacccttgtggattttataatcattcataaggatgacttg
caagactggctctttgtccttctcacacaactacttaagaaaatgggagcagatttactt
ggatctgtgcaagcgaaagttcagaaggctctagatgtcaccagggattcctttccattt
gatcaacaatttaacattttgatgagatttattgtggatcagactcaaactccaaacctc
aaggtcaaagtggcgatcctgaaatacatcgagtctctggccagacagatggaccccaca
gattttgtaaattccagtgaaacaagacttgctgtttctaggatcataacatggactaca
gaacccaagagttcagatgtgagaaaggcagcacagattgtgctcatctctctgttcgaa
ctgaacactcctgaatttaccatgttacttggtgccttgccaaaaacattccaggacggt
gccaccaaactcctgcataaccaccttaagaactccagtaacgctggtgtgggatctcca
agcaataccattggccggacaccttcccgacaccccagtagcaggaccagccccttgacc
tcacccaccaactgttcccatgggggactatctccaagcatgctggactatgacacggag
aacctgaactctgaggaaatctacagctctttgcgtggagttacagaagccatcgagaag
ttcagcttccgaagccaggaggatctaaatgagccaatcaagcgagatggcaagaaggat
tgtgatatcgtgtcccgagatggaggagcagcctcacccgccaccgagggccggggaggt
agtgaggtagaaggaggcaggatggctttggacaacaagacctccctgctcaacacacag
cctccacgtgcctttccggggccaagagcacgggagtacaacccgtatccctactctgac
accatcaacacctatgacaagacggctctgaaggaagcagtgtttgacgatgacatggag
cagctccgagatgtgcccattgaccactcggacctggtggctgacttgctgaaagagctg
tccaaccacaacgagcgtgtggaggagcggaagggcgcactcctggagctgcttaagatc
accagggaggacagcctgggcgtgtgggaggagcacttcaagaccatcctgctgctgctg
ctggaaactctcggagacaaagaccattccattcgagctctggcactgagagttttacgg
gagattctgagaaaccagccagcaagattcaaaaactacgcagaactgacgatcatgaag
actctggaagcccacaaagactcccacaaggaggtggtgagagcagctgaggaagctgcg
tccacactagccagctcaatccacccggagcagtgcatcaaagtgctgtgtccaatcatc
cagacagcagactaccccatcaacctggctgccatcaagatgcagacaaaagtggtggag
aggattaccaaggagtccttgctgcagctccttgttgacatcatccccggcctgctgcag
ggttacgacaacactgagagcagtgtacggaaagccagcgtgttttgcttagtggcaatc
tattccgtaatcggagaagatctgaaacctcacctcgcacagctcacggggagcaagatg
aagctgctgaacttatatataaagagggcccagactaccaacagcaacagcagctcctct
tctgacgtgtctacacacagctag
DBGET
integrated database retrieval system
