Rattus norvegicus (rat): 304913
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Entry
304913 CDS
T01003
Symbol
Tnn
Name
(RefSeq) tenascin-N precursor
KO
K06252
tenascin
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04151
PI3K-Akt signaling pathway
rno04510
Focal adhesion
rno04512
ECM-receptor interaction
rno05165
Human papillomavirus infection
rno05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
304913 (Tnn)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
304913 (Tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
304913 (Tnn)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
304913 (Tnn)
09172 Infectious disease: viral
05165 Human papillomavirus infection
304913 (Tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rno00536
]
304913 (Tnn)
Glycosaminoglycan binding proteins [BR:
rno00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
304913 (Tnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Ig_DSCAM-DSCAML_C
DUF4998
EGF_Teneurin
Pur_ac_phosph_N
EGF_TEN
Fn3_Dep-1_2nd
FN3_Tor_3rd
EGF_2
EGF_Tenascin
Wtap
Motif
Other DBs
NCBI-GeneID:
304913
NCBI-ProteinID:
NP_001100659
RGD:
1306002
Ensembl:
ENSRNOG00000002548
Vega:
OTTRNOG00000000167
UniProt:
D3ZK14
LinkDB
All DBs
Position
13:complement(74852586..74919789)
Genome browser
AA seq
1562 aa
AA seq
DB search
MGLWGMLAFPLGFLLASALLVASAPANPETPGCSHKDQQVTVSHTYKIDVPKSALVQVET
DPQSLSDDGTSLLVPGEDGEEQNIIFRHNIRLQTPQKNCELADSVQDLLARVKKLEEEMA
ELKEQCSTSRCCQGAADLSRHCSGHGTFFAETCSCHCDQGWEGADCEQPTCPGACSGHGR
CVDGQCVCDQPYVGVDCAYAACPQDCSGHGVCVRGVCQCHKDFTAEDCSEQRCPGDCSGN
GFCDTGECYCEMGFTGPDCSQVVAPQGLQLLKSTENSLLVSWEPSSEVDHYLLSYYPLGK
EQATKQVRVPKEQHTYDITGLLPGTKYIVTLRNVKKDISSSPQHLLATTDLAVVGTAWVN
EETETSLDVEWENPLTEVDYYKLRYGPLTGQEVTEVTVPKSRDPKSRYDITGLQPGTEYK
ITVVPIRGDLEGKPILLNGRTEIDGPTNVVTNQVTEDTASVSWDPVRADIDKYVVRYISH
DGETKEKAVPKDQSSTVLTGLKPGEAYKVFVWAERGNQGSKKADTKALTEIDSPENLVTD
RVTENSLSVSWDPVEAEIDRYVVSYTSVDGETKQVPVRKDQSSTVLTGLSPGVEYKVYVW
AEKGDRESKKANTKAPTDIDSPKNLVTDQVTENTLSVSWDPVQANIDRYMVSYTSADGET
REVPVPKEKSSTVLTGLRPGMEYKVHVWAQKGTQESRKANTKAPTDIDGPKNLVTDQVTE
TTLSVSWDPVEADIDRYMVRYTSPDGETKEVPVSKDKSSTVLRGLRPGVEYKVDVWAQKG
AQDSRKANTKAPTDIDSPKNLVTEQVTESTATVSWDPVEADIDRYVVRYTSVDGETREFL
VGKDQTSTILTGMKPGVEYQVDVWAQKGTRESRKTSTKAPTDIDGPKNLVTDQVTETTLS
VSWDPVEADIDRYMVRYTSPDGETKEVPVSKDKSSTVLRGLRPGVEYKVDVWAQKGAQDS
RKANTKAPTDIDSPKNLAINQVTETTLSVSWDPVQADIDRYVVRYTSADGESKEFLIGKE
QRSTVLTGLRPGVEYKVEVWAQKGARESKKANTKGHTDIDSPKNLVTNQVTENTATISWD
PVQADIDRYMVRYTSADGETREVPVRKEKSSTVLTGLRPGVEYTVQVWAQKGARESRKAK
TKAPTEIDSPKNLVTNRVTENTATISWDPVRATIDRYMVRYTSADGETKEVPVSKDQSST
ILTGLKPGMEYTIHVWAQKGARESKKADTKALTEIDPPKNFRPFGVTHSSGVLTWMPPSA
QIDGYILTYQLPNGILKEVELQRGQQRFELQDLEQGVTYPVSLVAFKGNQRSRSVSTTLS
TVDARFPHPSDCSQVQQNTNAAASGLYTIYLNGDASRPMQVYCDMDTDGGGWIVFQRRNT
GQLDFFKRWRSYVEGFGDPMKEFWLGLDKLHNLTTGTTTRYEVRADLQTANESAYAVYDF
FQVASSKERYKLSVGKYRGTAGDALTYHNGWKFTTFDRDNDIALSNCALTHHGGWWYKNC
HLANPNGKYGETKHSEGVNWEPWKGHEFSIPYVELKIRPFGYSRDRFSGRKKRSIGGKAR
VF
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgtgggggatgcttgccttccccctgggattcctgcttgcttctgcgctcctg
gtggcttcagccccagccaacccagagactcctggctgcagccacaaagaccaacaggtc
accgttagccacacctacaagattgatgtgcccaagtctgctctggttcaagtagagacg
gacccacagtcactcagtgatgatgggacatcactcttggttcctggggaggatggggag
gagcagaacattatcttcaggcacaacatccgtcttcagacaccgcagaagaactgtgag
ttggccgacagtgtccaggacctgctagcccgggtgaaaaagctggaggaggagatggca
gagctgaaggagcagtgtagtaccagccgctgctgccagggagctgccgatctgagccgt
cactgcagtgggcatgggaccttcttcgctgagacctgcagctgccactgtgaccagggc
tgggagggcgctgactgtgagcagcccacctgtcctggggcttgcagcggccacgggcgg
tgcgtggatgggcaatgcgtgtgtgatcagccctatgtgggggtcgactgcgcctacgcc
gcctgtccccaggactgcagtgggcatggcgtgtgtgtgcggggtgtctgccagtgccac
aaggacttcacagctgaggactgcagcgagcagcgctgtcctggcgactgtagtggcaac
ggcttctgtgacactggcgagtgttactgcgagatgggctttactggccccgactgttcc
caggtggtggctcctcagggcctgcagttgctcaagagcaccgagaactccctgctggtg
agctgggagccctccagtgaggtggaccactacctgcttagctactaccccttggggaag
gagcaagctacaaaacaggtccgggtgcccaaggagcaacacacctacgacatcactggt
ttgctgcctggcaccaagtacatagtcaccctgcgtaacgtgaagaaggacatttccagc
agccctcagcatctccttgccaccacagatcttgctgtggtgggcacggcctgggtaaat
gaggagactgagacatctcttgatgtggagtgggagaaccctctgactgaggtggactat
tacaagcttcggtatggccccttaacagggcaggaagtgactgaggtcactgtgcccaag
agccgtgatcccaagagtagatatgacatcaccggtctgcagcctggaacggaatataaa
atcacagttgtgcccataagaggagatctggagggaaagccaattctcctcaatggcagg
acagaaattgatggaccaaccaatgtggtcacaaaccaagtgacagaagacacagcatct
gtttcctgggatccagtgagggctgacatagacaagtatgtggtgcgctatatctcccat
gatggggagaccaaggagaaggcagtacccaaggaccagagcagcaccgttctcacgggc
ctgaagccaggagaggcctacaaagtctttgtgtgggctgagagaggcaaccaaggcagc
aagaaagcagacaccaaggccctcacagaaattgacagcccagaaaacctggtgaccgac
cgtgtgacagagaacagtctctctgtctcgtgggacccggtggaggctgaaatagacagg
tacgtggtgagctacacttccgtggatggagagacaaagcaggttccagtgaggaaggac
caaagcagcaccgtcctcaccggcctgagtccaggtgtggagtacaaagtgtacgtgtgg
gcagagaaaggtgatcgagagagcaagaaggccaacaccaaggctcccacagacattgac
agccccaaaaacttggtgactgaccaggtgacagagaacactctcagtgtctcttgggac
cctgttcaggccaacattgacaggtatatggtgagctacacttctgctgatggagagacc
agggaggttccagtgcctaaggagaagagcagcactgttctgacaggcctgaggccaggc
atggagtacaaggttcacgtatgggcccagaaggggacccaggagagcaggaaggccaat
accaaggcccccacagatattgatggccccaaaaacctagtgactgaccaggtgacagag
accactcttagtgtctcctgggacccagtggaggctgacatcgatagatacatggtacgc
tacacgtctcctgatggagagaccaaggaggtccctgtgtcaaaggataagagcagcaca
gtcctgaggggcctgaggccaggtgtggagtacaaggttgatgtgtgggcccagaagggg
gcccaggacagccggaaggccaacaccaaggcccccacagatattgacagtcccaaaaac
ctcgtgactgagcaggtgacagagagcactgccaccgtgtcctgggacccagtagaggct
gacattgacaggtatgtggtgcgctacacctctgtcgatggagagaccagggaatttctc
gttgggaaggatcaaacaagcaccatcctgaccggcatgaaaccgggtgtggagtatcag
gtcgatgtgtgggcccagaaggggacacgggagagcaggaagaccagcaccaaggcccca
acagatattgatggccccaaaaacctagtgactgaccaggtgacagagaccactcttagt
gtctcctgggacccagtggaggctgacatcgataggtacatggtacgctacacgtctcct
gatggagagaccaaggaggtccctgtgtcaaaggataagagcagcacagtcctgaggggc
ctgaggccaggtgtggagtacaaggttgatgtgtgggcccagaagggggcccaggacagc
cgaaaggccaacaccaaggcccccacagatattgacagtcccaaaaacctggcgatcaac
caggtgacagagaccacgctcagtgtctcctgggacccagtacaggctgatatcgacagg
tatgtggtgcgctacacctctgctgatggagaatccaaagaattcttgattgggaaggaa
cagaggagcactgtcctgacaggcctgaggccaggcgtagagtacaaggttgaagtgtgg
gcccagaaaggagcccgggagagcaagaaagccaacaccaaaggccacacagacattgac
agtcccaaaaacctggtgaccaatcaggtgacagaaaatacagccaccatctcctgggac
ccagtgcaggctgatattgacaggtacatggtgcgctacacctctgctgatggagagacc
agggaggttccagtgaggaaggagaagagtagcacggtgctcacaggcctgaggccagga
gtggagtacacagtccaagtgtgggctcagaagggggcccgggagagcaggaaggccaaa
accaaggcccccacagaaattgacagccccaagaacttggtgaccaaccgagtgacagag
aatacagccaccatctcctgggacccagtacgagccaccattgacaggtacatggttcgc
tacacctctgcggatggagagactaaggaggttccagtgtcaaaggaccagagtagcacc
atcctgacaggtctgaagccaggcatggagtataccattcatgtgtgggcccagaagggg
gctcgggagagcaagaaggctgataccaaggccctaacagaaattgaccctcccaaaaat
ttccgtccatttggtgtaacacattccagtggggttttgacctggatgcccccctctgct
caaatcgatggctacattttgacctaccagcttccaaatggcatcttgaaggaggtggag
ctccaaagaggccagcagagatttgagttgcaagacctggaacagggcgtcacctatcct
gtttctctggttgcctttaaaggtaatcagcggagccggagtgtgtctaccaccctttct
acagtggacgcccgatttccacacccctcagactgcagtcaggttcagcagaacaccaat
gctgctgccagtggcctctacacgatctacctcaatggcgatgccagccggcccatgcag
gtttattgtgacatggacacggatggaggcggctggattgtctttcagagacgtaacact
gggcagctggatttcttcaagcgttggcggagttatgtagaaggctttggggaccccatg
aaggagttctggcttggacttgacaaactacataatctcaccactggcactaccactcgg
tatgaggtgagggcagatttacagactgccaatgaatccgcctacgctgtgtatgacttc
ttccaagtggcatccagcaaagagcggtacaagctgtcggttgggaaatacagaggcaca
gcaggggatgctcttacctaccacaatggttggaagttcacaacttttgacagagacaat
gatattgccctcagcaactgcgcgctgacgcatcatggcggctggtggtataagaactgc
catttggccaacccgaatggcaaatatggggagaccaagcacagtgagggggtgaactgg
gagccatggaaaggacatgagttctccattccttacgtggagctaaaaatccgccccttt
ggttacagcagagaccgtttctctggcaggaagaagcggtccataggagggaaggcaaga
gtgttctaa
DBGET
integrated database retrieval system
