Rattus norvegicus (rat): 305332
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Entry
305332 CDS
T01003
Symbol
Limch1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform l
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rno04990
]
305332 (Limch1)
Domain-containing proteins not elsewhere classified [BR:
rno04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
305332 (Limch1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
305332
NCBI-ProteinID:
NP_001178607
RGD:
1305269
Ensembl:
ENSRNOG00000002318
LinkDB
All DBs
Position
14:complement(41466433..41779477)
Genome browser
AA seq
1085 aa
AA seq
DB search
MACPALGLEVLQPLQPEPPPEPAFAEAQKWIEQVTGRSFGDKDFRTGLENGILLCELLNA
IKPGLVKKINRLPTPIAGLDNTILFLRGCKELGLKESQLFDPSDLQDTSNRVTVKNFDYS
RKLKNVLVTIYWLGKAANSCTSYSGTTLNLKEFEGLLAQMRKETDDIESPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSRQTPSPDVVLRGSSDGRGSDSESDLPHR
KLPDVKKDDMSARRTSHGEPKSAVPFNQYLPNKSNQTAYVPAPLRKKKAEREEYRKSWST
ATSPLGGERPFRYGPRTPVSDDAESTSMFDMRCEEEAAVLPHSRARQEQLQLINNQLREE
DDKWQDDLARWKSRRRSASQDLIKKEEERKKMEKLMSGEDGTSERRKSIKTYREIVQEKE
RRERELHEAYKNARSQEEAEGILQQYIERFTISEAVLERLEMPKILERSHSTEPNVSSFP
NDPSPMKYLRQQSLPPPKFTATVETTIARTSVPESSVAAGTGSPSKTSTPNTVPMLTPRP
YSQPKNSQEVLKTFKVDGKVSMNGETARGDVEGKEKEDPTAVAPGPSLTKSQMFEGVATV
HGSPVQVKQGSNSIEINIKKPNSPPQELTAASEETESNGRDDENGEESSGARDVELDSAE
PQHFTTTVTRCSPTVALVEFSSSPQLRNEVPEEQDQKKPENEMSGKVELVLSQKVAKPKS
PEPEATLTFPFLDKMPETDQLHLPNLNSQADSPSSEKSPASTPFKFWAWDPEEERRRQEK
WQQEQERLLQERYQKEQDKLKEEWEKAQKEVEEEERRYYEEERKIIEDTVVPFTISSSSA
DQLSTSSSVTEGSGTRNKMDLENCQDRDKERRQNTPLQENDSDSSLKARESGLPEEHSSL
TQSPSANSENSVSKGISQDQQPETEAEASHCGTNPQSAQDPPWNQQISNPPTSKSEDVKP
KTLALEKSINHQIESPGERRKKSPRENFRAGPLSPCSPTPPGQSPNRSISGKKLCSSCGL
ALGKGAAMIIETLNLYFHIQCFRCGICKGQLGDAVSGTDVRIRNGLLNCTDCYMRSRSAG
QPTTL
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggcttgccccgctctcggtctggaagtccttcaacccctgcagcccgaaccacctccg
gagcctgccttcgccgaggcacagaagtggatcgagcaagtcacgggtcgaagttttggt
gacaaagacttccggacaggactagagaatggaatccttctttgcgagttgctgaatgct
ataaagccaggacttgttaaaaagatcaatagattgcctacccccattgcaggattggac
aacaccatcttattcttgagaggctgtaaagagcttggccttaaagaatctcaactcttt
gacccaagtgacctccaggatacttccaacagggtcactgtcaagaacttcgattatagc
aggaagctgaaaaacgtgttggtgaccatttactggctggggaaagctgcaaatagctgc
acatcctacagtggaaccacactgaacctgaaggagttcgaaggactgttggctcagatg
cgaaaggagactgatgacattgaaagccccaagcgcagcatccgagacagtggctacatc
gactgctgggactctgaacgcagtgactccctttctcctcctcgccacggccgggatgac
tcctttgacagcctggattcttttggctcccgctccaggcagacaccttcaccagatgta
gttctcaggggaagcagtgatggaagaggaagtgattctgaatcagacttgccccaccgg
aagttgccagatgtgaagaaagatgatatgtccgcacgacggacttctcatggtgagccg
aaatcagcagtgccttttaaccagtacctcccgaacaaaagcaaccagacagcctatgtc
ccagcccctctgagaaagaagaaggcggagcgggaagaatacaggaagagctggagtacg
gccacctcccccctgggcggggaaaggcccttcagatacggtccgagaactcctgtgtca
gatgacgcagagagcacgagtatgtttgacatgcggtgtgaggaggaggcagcggtgctg
ccgcacagcagggcccgccaggagcagctgcagctgataaataaccagctgagggaagag
gacgacaaatggcaagatgacctggctcgctggaagagccgtcgaagaagcgcttcccag
gacttaatcaagaaagaggaagaaaggaaaaaaatggagaagttgatgtctggagaagat
gggacaagtgaacggaggaaaagcatcaaaacttacagagaaattgtccaagaaaaggag
cggagagagagggagctgcacgaggcatataagaatgcaaggtcacaggaggaggcagag
gggatcctccagcaatacatcgagaggttcaccatcagtgaggctgtcctcgaacgcttg
gagatgccaaaaattctggaaagaagccattcaacagagccaaacgtatcctccttcccc
aacgaccccagccccatgaaatacttgcgtcagcagtcactgcccccgcccaagttcact
gccacggttgagactaccatcgctcgcaccagtgtcccagagagcagcgtagcagcaggc
actgggtctccaagcaaaaccagcactccaaacacggtgcctatgctgacacccaggcct
tactcccagcccaaaaactctcaagaggttctgaagacttttaaggtcgatgggaaagtc
agcatgaatggagaaacggcccgtggagatgtggaaggaaaggaaaaagaagaccccaca
gcggtggcccctggcccttccttaaccaagtcccagatgtttgaaggcgtggccacggtg
catggctctcccgtgcaagtgaaacaaggcagcaacagcatcgagatcaacatcaagaag
ccaaattctcctccccaggaactgacagcagcctctgaggaaactgagtcaaacggccga
gatgatgagaacggtgaagagagctcaggggcacgggatgtggagctggattcggcagag
ccacagcattttacaacaaccgtgactcggtgcagcccaaccgtggccctggtggagttt
tcttccagcccgcagctgaggaatgaagtaccagaagaacaagaccagaagaagccagaa
aacgagatgagcgggaaggtggagttagtactgtcccagaaggtggcaaagccaaaatcc
ccagaaccggaagcaaccttgacatttccatttcttgacaaaatgcctgaaaccgaccaa
ctacatttgccaaatctcaattctcaagcggattccccaagcagtgagaagtcccccgca
agcacgccttttaagttctgggcgtgggacccggaagaggagcgtaggcgacaggagaag
tggcagcaggagcaagagcgcctgctccaggagaggtatcagaaggagcaggataagctg
aaggaggaatgggaaaaggcccagaaggaggtagaagaagaggaacgcagatactatgag
gaggagcgtaagataattgaggacaccgtggttccattcactatttcctcgagttctgcc
gaccagctgtctacatcctcatctgtaactgaaggcagcgggacaaggaataagatggac
ttggaaaactgccaagacagagacaaagagagaagacagaacactcccctccaggagaat
gacagtgactcatcactcaaagctagagaaagtggcctgcccgaggagcacagcagccta
actcaaagtccctcagctaactctgaaaactccgtgtcaaaaggaattagtcaggaccag
cagccagagacagaggctgaggcctcacactgtggtacaaacccacagtcagctcaggat
ccaccttggaatcaacagatctcaaacccaccgacatccaagtcggaagacgtgaagccc
aaaaccctagccctggagaaaagcattaatcatcagattgagtctccgggggaaaggcgg
aagaaaagccctcgagagaacttccgggctgggcccctgtccccctgctctcctacccct
cctggccagtctccaaacaggtctataagcgggaagaagctgtgctcctcctgtgggctt
gctttggggaaaggcgccgcaatgatcatcgagactctgaatctctactttcacatacag
tgtttcaggtgcggcatttgtaaaggacagctaggagatgcagtgagtgggacagatgtc
aggattcgcaacggtcttctaaactgtaccgactgctacatgcgatccagaagtgctggc
cagcctacaacactgtga
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integrated database retrieval system