Rattus norvegicus (rat): 305441
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Entry
305441 CDS
T01003
Symbol
Sh3tc1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
305441 (Sh3tc1)
Membrane trafficking [BR:
rno04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
305441 (Sh3tc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
SH3_1
TPR_2
TPR_7
TPR_1
SH3_9
SH3_2
TPR_19
Motif
Other DBs
NCBI-GeneID:
305441
NCBI-ProteinID:
NP_001100696
RGD:
1305610
Ensembl:
ENSRNOG00000007993
UniProt:
A6IJZ0
LinkDB
All DBs
Position
14:79230322..79274622
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AA seq
1345 aa
AA seq
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MRSFREEEATSEDLSTMGQGPEEPPGGCSLEDKIQSISMGLPTSQERTGPEEAEATTVRG
DVAPPCGMVGQAAEPPSNQMAVYPTDLTLQLLAVRRKSGLRSPSLQQTLRSRLRLLENDS
REVARVLGELSARLLSIHSDQDRIVVTFKTFEEIWKFSTYHALGFTHHCLENLLVDQTFW
LLSPSEEEETAILIYVNKDALKQTHKSLLAQEGSFFVLCPDHCVRRTKEPQGAGKGPQTL
RRASGVTLGVPVVETVSSSPTPSMSSKAEAVEAEPEPLTPFHQWTLRVPWDPIDESMSGP
GTPDAQFMRFGLASAIADFQGSGPEEMSFSVGDVIEIVGAQVPGLPWCLGQHMASGQVGF
VRTGLVRMQGPASDLESSIFLSEEERSFFRSEAHFSDEDARRLLCRTSGTDVCTTCSLDW
LEEAEGEQLEQQEMSLPHLNPEPHESLHMVKNVLEKCKACPDHPEDPVSWSLGAVSSRVS
SPDLEEPPFCLDPDDDWTDPEPPDSLLQVLSAPGYRAQFRSLYDISLPCLSTALYSFDDE
EELAERLAQARGVAKKVDLGMALARLCLLLGRLCARKLKLSQARVYFEEALGALEGSFGD
LSLVAAVYSSLATVYLKQKNGEKCVQLAPKAAALLLGTPGHSCSTDAELLKYALRRVVCG
LSPQAEARACFLLARHYTHLKQPEEALPYLERLLRLNRDVGTPQASWPEDCYLLLADIYG
RKCLPHLALSCLKVSSLWTRCSLAGSLRSVDLVLQNAPGPNSQRSTGHSLPSQIAHYLRQ
ALASLPPGTGQTLRGPLYASLAQLYSYHQQYGQAIAFMSQAAEADTAAGVHPVVDRLVAL
AWLHLLCGKSLVAMDILKCVSDAAVANKDQECVMMNMVAMALKRMGRTRQAAEGYFRALH
MAYSQGHLQSQAVVLANFGALCLQAGARSLAQHYLREAVGLFSQLPSGVCGRDFTQVLLW
LGQLCTRRTLPQQAKCYYEWAFLVAVETDHLESQLQAVQKLCHFYSKVMPNEVRCVIYHE
FQLALARKTADKVLEGQLLEAISQLYLSLGTERAYKSALDYTKRSLGIFIDLQQKEKEAR
AWLQAGKIYYILRQNELVDLYIQVAQNAALYTGDPKLGLELFEAAGDIFFNGTWEREKAV
SFYRDRALPLAVTVGDQEVELRLCNKLVALLSALEAPQEGLEFAHEALALSITLGDRLNE
RVAYHRLATLHHRLGHGELAEHFFLKALSLCTSPLEFDEETLYYVKVYLVLGDIIFYELK
DPFDAAGYYQLALAAAVDLGHKKAQLKIYTRLATIYHNFLMDREMSLFFYQKARTFASEL
NLRRTNLVPQHFCSRAPWLAPGYPS
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcttcagggaggaggaggcgacttctgaggatctgtccaccatggggcagggc
cctgaggagcctccaggaggctgtagcctggaagacaagatccagagtatatccatgggc
ttacctactagtcaggagagaacagggcctgaggaggctgaggcaacaacagtcagaggt
gacgttgctcctccctgtggcatggttgggcaagctgctgaacccccttccaatcaaatg
gcagtgtatccgacagacctcaccctgcaattgttggctgtgaggcggaagagtggactg
cggagccccagcctacagcagaccctgagaagccgactccgcctgctggagaatgacagc
cgggaagtggcccgagtacttggagaactgtcagccaggctgctgtccatccacagtgac
caggaccggatcgtggtgacgtttaagacttttgaagaaatctggaagttttccacctat
catgctcttggcttcacacatcactgcctggagaacctgctggtggaccagaccttctgg
ctgctttcccccagtgaggaggaggagactgccatcctcatatatgtaaacaaggatgcc
ttgaagcagacacacaagagccttctcgcacaagaagggtccttcttcgttctgtgtccc
gaccactgtgtgaggaggacaaaggaaccccaaggtgcagggaagggcccccagaccctc
agacgggcttccggggtcactctgggagtaccagttgtggaaacagtctcctcatccccc
acacccagcatgtcctccaaagcagaagcagtagaggctgagccagagcccttgactcca
tttcaccagtggactctcagggtcccatgggatcccatcgatgaatccatgagtggacct
gggacgcctgatgcccagttcatgaggtttggcctggcctctgcaatagctgacttccag
ggctcaggcccggaagagatgtccttcagcgttggtgatgtcatcgagatcgtcggtgcc
caggtgcctggcctgccctggtgtttgggccagcacatggcctctggccaggtgggcttt
gtgaggactggccttgtccgcatgcagggcccggcatctgacctggaaagttcaattttc
ctcagcgaggaagaaaggtcattcttcagaagtgaggctcacttctcagacgaggatgcc
cggcggctcctgtgcaggacatctggcacagatgtgtgtaccacatgcagcctggactgg
ttagaagaagctgagggagaacagctggagcaacaagaaatgtctctgcctcacctgaac
ccagagccacatgagagtctgcacatggtaaagaacgttttagagaagtgcaaggcctgc
cctgaccaccctgaagaccctgtatcctggagccttggagcggtgtccagcagagtgagt
tcaccggaccttgaggagccccccttctgcctggatcctgacgatgactggacagaccct
gagcctccggactcactgctgcaggtcctgagtgcccctggttatagggcccagttccgg
agcctgtatgatatctcacttccctgcctgagcaccgcactctatagctttgatgatgaa
gaagagttggctgaacgcttggcacaggcccgaggagttgccaagaaagtcgatttgggc
atggccctggcaaggctctgcctcctgctggggcggctgtgtgcccgaaagctcaaacta
tcccaggcccgggtgtactttgaagaggccctgggggctctggagggaagttttggggac
ctctccctggtggcggccgtgtatagcagcttggctactgtgtacctgaagcagaagaac
ggggagaagtgtgtgcagctggcacccaaagccgcagcgctgctcctgggaacgcccggc
cactcctgcagcacagatgccgagctcctgaagtacgcactgcgcagggtcgtctgtggc
ctcagcccacaggccgaggcccgggcctgcttcctgctggcccggcactacacccacctc
aaacagcctgaggaggcactgccatacttggagagactgcttcgcctcaacagggatgtg
gggaccccgcaggcctcgtggcctgaagactgttacctgcttctggcggacatctatggc
cggaagtgcctgccgcacctggcattgagctgcctcaaggtgtcctcactgtggacaaga
tgctctctggctggctccttgaggagtgtggacctggtactccagaatgctcctgggcca
aacagccaaaggagcacaggtcatagccttccctcccagattgctcactacctcagacag
gcattggcctctctgcctcccggcacgggacagacactgcgagggccactctatgccagc
ctggctcaattgtacagttaccaccagcagtacggccaggccatagccttcatgtctcag
gctgcagaagctgacactgcagctggggtccaccctgtcgtggaccgcttggtggcgctc
gcctggctgcacctgctttgtgggaaaagcttagtagccatggacatcctgaagtgcgtc
tcagacgcggccgtggccaataaggaccaggaatgtgttatgatgaacatggtggccatg
gccctgaagaggatgggcaggacccggcaggctgctgaaggctacttccgagctctgcac
atggcctacagccagggccacctgcagagccaggcagtggtcctagctaactttggggcc
ctgtgcctgcaagctggcgcacgcagcttggcccagcactacctgcgggaggccgtgggg
ctcttctcccagctgcccagtggcgtgtgtggccgtgacttcacccaggtgctcctgtgg
ttgggccaactgtgtacgcgccggaccctcccccagcaggccaagtgctactatgagtgg
gcctttctggtggctgtggagacggaccatctggagagtcagttacaggcggtgcaaaag
ctgtgccacttctacagtaaggtcatgcccaacgaggtgcgatgtgtcatctaccatgag
ttccaactggctctggcacgcaagaccgctgacaaggtgctggaggggcagctcctggag
gccatcagtcagctctacctgtcgctgggcactgagcgggcctacaagtcggctctggat
tacactaaacggagcctggggattttcatcgacctgcagcagaaggagaaggaggcacgc
gcctggctgcaggcagggaagatctactatatcctccgtcagaatgagctggtggacttg
tacatccaggtggcacagaatgcagccctgtataccggggaccctaagctggggctggaa
ctgtttgaggcagctggggacatcttcttcaatgggacctgggagcgggagaaagctgtg
tccttctaccgggaccgggcactgcccctggctgtgactgtaggagaccaagaagtggag
ctgcgcctgtgcaacaagctggtggccctgctgtctgcactggaggcaccccaggagggc
ctagagttcgcccatgaggccctagcactcagcatcaccctaggtgaccggctgaatgag
cgagtggcctaccacaggctagccaccctgcaccaccggctgggccacggggaactggcc
gagcacttcttcctgaaggctctgtcgctctgcacctcgcccctggaatttgatgaggag
accctgtactatgtgaaggtctacctggtactgggtgacatcatcttctatgagctgaag
gaccccttcgatgcagctgggtattaccagctggctctggcagcagccgtggacctgggc
cacaagaaggctcagttgaagatctatacacgcctggctaccatctaccacaacttcctc
atggaccgagaaatgtccctcttcttctaccaaaaagcaaggacctttgcctcagaactg
aatctccgcaggaccaacctggtaccccagcacttctgtagccgggcaccctggttggcc
cctggctacccatcctga
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