Rattus norvegicus (rat): 305464
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Entry
305464 CDS
T01003
Symbol
Depdc5
Name
(RefSeq) GATOR complex protein DEPDC5
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
305464 (Depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
305464 (Depdc5)
Membrane trafficking [BR:
rno04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
305464 (Depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
DEP
Motif
Other DBs
NCBI-GeneID:
305464
NCBI-ProteinID:
NP_001100699
RGD:
1311535
Ensembl:
ENSRNOG00000018144
UniProt:
A6IK73
LinkDB
All DBs
Position
14:complement(81956777..82087392)
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AA seq
1456 aa
AA seq
DB search
MWRLKKSLVSTCAYITQKVEFAGIRAQAGELWVKNEKVMCGYISEETRVVFRSTSAMVYI
FIQMSCEMWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYDAKSIDE
FPEVNRASIQQDHKGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAGGF
PQGDNSTSAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILT
KQRMIDNGIGVDLVCMGEQPLHAVPLFKLHNRSVPRDSRLGDDYNIPHWINHSFYTSKSQ
LFCNSFTPRIKLAGKKSATEKTKNGRDTSLGAPKESENTLPIQVDYDAYDAQVFRLPGPS
RAQRLATCRSVREQENHNRKSASSCDVSSSPSLPSRALPTEEVRSQASDDSSLGKSTNIL
MIPNPHLHQYEVSSSLGYTSTRDVLENMIEPPQRDSSAPGRFHVGSAESMLHVRPGGYTP
QRALINPFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSRQRDPTH
SSAELLELAYHEAAGRHSTSRQPGDSMSLNFSGTEELSVSLLSNSGTGMNPRNQNKDSLE
DGVSTSPDPMPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQGLQNDYTEGCYDLLPEADM
DRRDEEGVQMTAQQVFEEFICQRLMQGYQIIVQPKTQKPSTTVPPPLSSSPLYSRGLVSR
NRPEEEGQYWLSMGRTFHKVTLKDKMITVTRYLPKYPYESAQIHYTYSLCPSHSDSEFVS
CWVEFCHERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACVTATKRITEGE
VHCDIYGDKPRADEDEWQLLDGFIRFVEGLNRIRRRHRSDRMIRKGTAMKGLQMTGPISA
HSLESTGPPVGKKGTSALSALLEMEASQKSLGEQQTSVHGKSSTQPAENSSVAMTPTYVD
SPRKASVDQTAPLVLDSTSLGVSTCQSVDRGNNQTFGNSQNIEQAFPSTGSGDGSSQQHI
ASSLTSSSTLVEILEAMKHPSTGVQLLSEQKGLSPCCFISAEVVHWLMNNVEGVQTQAMG
IDIMQKMLEEQLIAHASGEAWRTFVYGFYFYKIVTDREPERVAMQQPSAPWHTAGVDDFA
SFQRKWFEVAFVAEELVHSEIPAFLLPWLPSRPASYASRHSSFSRSFGGRSQAAALLAAT
VPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLNAAFEIKLHWMAVTATVLFEMVQGWHR
KATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFIPLNLGCLLKEGSEHLFDSFEPETYWD
RMHLFQEAIAHRFGFVQDKYSASAFNFPAENKPQYIHVTGTVFLQLPYSKRKFSGQQRRR
RNSTSSTNQNMFCEERVGYNWAYNTMLTKTWRSSATGDEKFADRLLKDFTDFCINRDNRL
VTFWTNCLEKMHASAP
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgactaaagaaaagtttggtgagcacctgtgcctatatcacccagaaagtggaa
tttgctggcatcagggcacaggctggtgagctgtgggtcaagaatgagaaggtcatgtgt
ggttacattagtgaagagaccagggtggtgttccgttctacgtcggctatggtttacata
tttattcagatgagctgtgaaatgtgggattttgatatttatggggatctgtactttgag
aaagctgtgaatggtttccttgccgacctgtttactaagtggaaggagaagaactgtagc
catgaagtgactgtggttctgttttctagaactttttatgatgcaaaatctattgatgaa
tttcctgaagtaaaccgagcttcaattcaacaggatcataaagggagattctacgaggac
ttttacaaagtggtggtgcagaacgagagaagggaagagtggacgtcactccttgtgacc
attaagaaactcttcatccagtatccagtgttggttcgactggaacaggcagggggcttt
cctcaaggagacaattctacctcagcacaaggaaactacctagaggccatcaacttgtca
ttcaatgtgtttgacaagcactacatcaaccgaaactttgaccgaactgggcagatgtcc
gtggtgatcacgccgggggtgggtgtctttgaagtggaccgcctcctcatgatcttgacc
aagcagcggatgatcgataatggaattggtgtggacttagtgtgcatgggagagcagcca
ttacacgctgtgccattattcaagctgcacaaccggagtgtgccacgggattctcggctg
ggcgatgactataatattcctcactggataaaccacagtttctacacatccaaaagccag
ctgttttgtaacagtttcactccaaggataaaactggcaggaaagaagtctgccactgag
aaaaccaaaaatggccgtgatacatctcttggggctccaaaggaatctgaaaacaccctt
cccatccaagtagattatgatgcctacgatgcccaagtattccggctgcctggtccatcc
cgggcccagcgactcgccacctgcaggtctgtgagagagcaggaaaatcacaatcgcaaa
agtgccagctcctgtgacgtctcctccagcccttccttgccaagccgtgcactgcccact
gaggaagtgaggagccaggcttcagacgacagctccctgggcaagagcaccaacatcctg
atgatccctaacccccatctgcaccagtatgaagtcagcagctcactgggctacaccagc
acccgagatgtcctggagaacatgatagaaccaccacagcgggactctagtgcacctgga
aggttccacgtgggcagtgcagagtccatgctacatgttcgacctggaggctacacccct
cagagagcactgattaaccccttcgccccctcaagaatgcccatgaagctcacctccaac
agaaggcgctggatgcatacttttcctgtaggaccatctggagaggccatccagatccat
catcaaacccggcaaaacatggcagagctgcagggcagcaggcagcgggaccccacccac
tcctctgcagaactgttggagctggcatatcatgaagccgcaggaaggcacagcacttcc
cgacagcctggtgacagcatgtccttgaacttcagtggaacggaagagctttctgtcagc
ctgcttagcaacagcggcacaggtatgaatcctaggaaccagaataaggactctctagag
gatggtgtttctacctctccagacccaatgccaggcttctgttgcacagttggagtggat
tggaagtctcttactactcctgcatgccttcccctcaccactgactacttcccggaccgt
cagggcctgcagaatgactacacagagggctgctatgatctcctcccagaagcagacatg
gacaggagggacgaggagggcgttcaaatgacagcccagcaagtgtttgaagagttcatc
tgccagcgtctcatgcagggttaccaaatcatagtacagccaaagacccagaagcccagc
actacagtcccacccccgctgagcagtagcccactctatagcagaggccttgtgtcccga
aaccgccctgaagaggagggccagtattggctgagtatgggcagaaccttccataaggtg
acacttaaggacaagatgatcacagtgactcgttaccttcccaagtacccttatgaatct
gcccagatccattacacctacagcctctgcccttcccactctgactcagagtttgtctcc
tgttgggtggaattctgccatgaacggctagaggaatacaagtggaattacttagatcag
tacatttgttctgccggctccgaagatttcagcttaatcgagtctctgaagttctggaga
acccgatttctactactgccagcctgtgtcactgccaccaagcgcatcacagaaggggaa
gtgcactgtgacatctacggggacaaaccccgtgcagatgaagatgagtggcagcttcta
gatggctttattcgctttgtagagggcttgaaccgcatccgcaggcgccaccggtcagac
cgcatgattcggaaagggactgccatgaaaggcttgcagatgaccgggcccatctccgca
cactctctcgagtcaacgggccccccagtcgggaagaaaggaacctcagctctgtctgcc
ctgctggagatggaggctagtcagaagagcctaggagaacagcagacaagtgtgcatggg
aaaagctctactcagccagctgagaacagcagtgttgccatgactcccacctatgtggac
agcccacgcaaggcatctgtggaccaaacagctcctctggtgttggacagcaccagttta
ggggtcagcacgtgccagtccgtggatagaggcaataaccagacctttgggaactcccag
aacatagaacaggcctttccctctacaggctctggagacggcagctctcagcagcacata
gccagctctctgacatcgtcctctaccctggtggagatcctggaagccatgaagcatccc
tcgacaggagtccagctgctgtctgagcagaagggcctttcgccgtgctgcttcatcagt
gcggaggtcgtacactggctgatgaacaatgtggagggggtccagacgcaggcgatgggc
atcgacatcatgcagaaaatgctggaagagcagctcatagcgcatgcatctggagaagca
tggcgaaccttcgtctacggcttctatttctacaagatagtcacggacagagagcccgaa
cgagtggctatgcagcagccctctgccccatggcacacagcaggagtggatgactttgcc
agcttccaacgcaagtggtttgaggtggcctttgtggcagaagagcttgtgcactccgag
attcctgccttcctcctgccctggctacctagccggccagcctcttacgcaagcaggcac
agctcctttagccgaagttttggaggacggagccaggcagctgcactgttagctgccact
gtcccagagcagaggactgtgaccctggatgtcgatgtgaacaaccgaacggaccggctg
gagtggtgcagctgttactaccacggaaacttctctctcaacgcagcctttgaaatcaag
ctacactggatggcagtgactgccacagtgctgtttgagatggtccaaggttggcatcga
aaagctacatcctgcggcttcttgttagtcccggttttggagggtccttttgcactgccc
agttacctgtacggtgaccccttgagggcccagctcttcatcccgctcaacctcggctgc
ttgctcaaggagggcagcgagcacctgttcgatagctttgaaccagagacatattgggat
cgaatgcaccttttccaggaagccattgcacacaggtttggatttgtgcaagataaatat
tctgcctccgcgtttaacttccctgctgagaataaaccacagtatatccacgtcacagga
acagtgtttcttcagctgccgtactccaaacgcaagttttctgggcagcagcggcggcga
cggaactctaccagctccaccaaccaaaacatgttctgtgaggagcgggttggctacaac
tgggcctataacaccatgctgaccaagacatggcgctctagtgccacgggggatgagaag
tttgccgatcggctgctgaaggacttcacggatttctgtatcaaccgtgacaaccgcctg
gtcacattctggacaaactgcctggagaagatgcacgccagcgctccctga
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integrated database retrieval system