Rattus norvegicus (rat): 305605 Help Entry 305605            CDS       T01003                                  Symbol Ccdc88a Name (RefSeq) girdin isoform X1   KO K25392   girdin Organism rno  Rattus norvegicus (rat) Brite KEGG Orthology (KO) [BR:rno00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:rno03037]     305605 (Ccdc88a) Cilium and associated proteins [BR:rno03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    305605 (Ccdc88a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HOOK_N APG6_N KASH_CCD Motif Other DBs NCBI-GeneID:  305605 NCBI-ProteinID:  XP_008768692 RGD:  1306694 Ensembl:  ENSRNOG00000004057 UniProt:  A0A8I6A5W7 LinkDB All DBs Position 14:107304654..107456104 Genome browser AA seq 1873 aa AA seqDB search MENEIFTPLLEQFMTSPLVTWVKTFGPLAAGNGTNLDEYVALVDGVFLNQVMLQINPKTE SQRVNKKVNNDASLRIHNLSILVKQIKFYYQDTLQQLIMMSLPNILVIGKNPFSEQGTEE VKKLLLLLLGCAVQCQKKEEFIEKIQGLDFDTKAAVAAHIQEVTHNQENVFDLQWMEVTD MSQEDTEPLLKSMASHLRRLIDERDEHSETIIELSEERDGVHFLPHASSSAQSPCGSPGM KRTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEVELKRLQQENMNLLS DARSARMYRDELDALREKAVRVDKLESELCRYKERLHDIEFYKARVEELKEDNQVLLETK TMLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQK QSMDESLHLGWELEQISRTSELAEAPQKSLGHEVNELTSSKLLKLEMENQSLTKTVEELR STMDSAEGSTSKILKVEKENQRLSKKVEILENEIIQEKQSLQNCQNLSKDLMKEKAQLEK TIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILHESIKETS GKLSKIEFEKRQMKKELELYKEKGERAEELENELNRLGKENELLQKKITNLKITCEKLET LEQENSELERENRKFKKTLDSFKNLTFQLESLEKENSQLDEENLELRRSVESLKCASMKM AQLQLENKELESEKEQLKKGLELMKASFKKTERLEVSYQGLDTENQRLQKALENSNKKIQ QLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENKR LRQQAEIKDTTLEENNVKIGNLEKENKTLFKEISVYKESCVRLKELEKENKELVKRATID IKTLVTLREDLVSEKLKTQQMNNDLEKLTHELEKIGLNKERLLQDEQSTDDSRYKLLESK LESTLKKSLEIKEEKIAALEARLEESTNYNQQLRHELKTVKKNYEALKQRQDEERMVQSS LPISGEDDKWGRESQEATRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQ AQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSSLENENE SIMKEREDLKSLYDALIKDHEKLELLHERQASEYESLISKHGTLKSAHKNLEVEHKDLED RYNQLLKQKGQLEDLEKMIKVEQEKMLLESKNHEMVAAEYKKLCGDNDRLNHTYSQLLKE TEILQTDHKNLKSVLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNL EEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQ YKFYDPSPPRRRGNWITLKMRKLIKSKKDINRERQKSLTLTPTRSDSSEGFLQLPHQDSQ DSSSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKDKDKMKACYRRSMSMNDLVQSMV LAGGQWTGSTENLEVPDDISTGKRRKELGAMAFSTTAINFSTVNSSAAFRSKQLVNNKDT TSFEDVSPQGISDDSSTGSRVHASRPASLDSGRTSTSNSNNNASLHEVKAGAANIQSRPQ SHSSGDFSLLHDHETWSSSGSSPVQYLKRQTRSSPMLQHKMSETVDSQAHHKMNAGSPGS EVVTLQQFLEESNKLTSIQLKSSSQENLLDEVMKSLSVSSDFLGKDKPVSCTLARSVSGK APGDFYDRRTAKPEFLRTGPQKTEDAYSISSAGKPTPSTQGKIKLVKETSVLRQSKDSNP YATLPRASSVISTAEGTTRRTSIHDFLSKDSRLPVSVEPAPPPAGGSSTAASNVNKVQES RNSKSRSREQQSS NT seq 5622 nt NT seq  +upstreamnt  +downstreamnt atggagaacgaaatctttactccccttctggagcagttcatgaccagccctttggtcact tgggttaaaacatttggaccactggctgcaggaaatgggactaacctggatgagtacgtg gctttggtggatggggtattcttgaaccaggtcatgctccaaattaatcctaagacggag agtcaaagagtaaataaaaaagtcaacaatgatgcttctcttagaattcacaatctatcc attttggtgaaacagataaaattttattatcaggacactttgcagcagttgattatgatg tcattaccaaatatcttagtcattggcaaaaatcccttttctgaacaaggtacagaagaa gttaaaaagttgcttttactcctacttggttgtgcagttcagtgtcagaaaaaggaagaa tttattgaaaaaattcaaggtttagattttgatacgaaagcagcagttgccgcacatatt caagaggtcactcataatcaggaaaatgtgtttgatctgcaatggatggaagtgacagat atgtctcaggaagacacagaaccactcttaaagagcatggcctcacacctcagaagactc atcgatgagcgagatgaacattcagagactattatagaactctctgaagagcgagatggt gttcattttctaccccatgcctcttcatctgcacagtcaccctgtggttctccaggcatg aagcgaacagaaagtcgacagcatctctcagtggaactggctgatgctaaggccaagatc cgaagacttaggcaggaattggaagaaaagactgagcagttactggactgtaaacaagaa cttgaacaaatggaagtggaattgaagaggctgcaacaggagaacatgaatttgctttcg gatgctcgatctgctagaatgtaccgagacgaattggatgccctccgagagaaagcagtc agagttgataagcttgaaagtgaactctgtagatataaagagagactacatgatattgaa ttttataaggcaagagttgaggaattaaaagaagataatcaagttttattagaaacaaaa actatgctggaagaccaactagaaggaactcgggctcgttctgacaaattacatgaatta gaaaaagagaatttacaattaaaggctaaattgcatgatatggaaatggagcgagatatg gatagaaagaagattgaagaattaatggaagaaaatatgactctggaaatggcacagaaa caaagtatggatgagtcattgcaccttggctgggagctggaacagatatccagaactagt gaacttgctgaagcaccacagaagtccttgggccatgaggtaaatgaattaacatcaagt aagttattgaagttggaaatggaaaaccagagtttgacgaaaactgtagaagagctacgg agtactatggactctgcagaaggcagcacttccaaaatcctcaaagttgaaaaggaaaac cagagactgagtaaaaaggttgaaattcttgaaaatgaaattattcaagaaaagcaaagt cttcagaattgtcaaaatttaagcaaagatctaatgaaagagaaagctcaacttgaaaaa acaattgaaacactcagagaaaattcagagaggcagattaaaatattggagcaggaaaat gaacatctcaatcaaacagtgtcttccttacggcagcgttcccagattagtgctgaggcg agagtgaaggatattgaaaaagaaaataaaattctccatgaatctatcaaagaaacaagt ggaaaactaagcaagattgaatttgaaaaaagacaaatgaaaaaggaattagagctttat aaagagaaaggagagcgagcagaagaacttgaaaacgagttgaatcgtcttggaaaggag aatgaattgttgcagaaaaagataactaatttaaagattacatgcgaaaaacttgagaca ttagaacaggaaaattcagagctagaaagagaaaataggaaatttaaaaaaactttggat agctttaaaaaccttacttttcagttggaatctctagaaaaagagaattcccaacttgac gaagaaaacttagagctgcgaaggagcgtggagtctttgaagtgtgcgagcatgaagatg gcccagctccaactggagaacaaggagctggagagtgagaaggagcagctcaagaagggc ttggagctcatgaaagcctctttcaagaagacagaacgcttagaagttagctaccaggga ctagacacagaaaatcaaagactacaaaaagctctagaaaatagcaataaaaaaatccaa caattagagagtgagctacaagacttagagatggaaaatcaaacattacaaaaaaaccta gaagaactgaaaatctctagcaaaagactggaacaactagaaaaagaaaataagtcatta gagcaagagacatctcaacttgaaaaggacaagaaacagttagagaaggaaaacaaacga ctccgacaacaagcagaaataaaagacaccaccttagaagaaaataatgtgaaaattggg aatttggaaaaagaaaacaaaactttattcaaagaaattagtgtatataaagagtcctgt gttcgtctaaaagaactagaaaaggaaaataaagagcttgtgaaaagagcaactattgat attaaaaccttggttacattacgtgaggatttagtcagtgaaaaattgaagacgcaacaa atgaacaatgatctggagaaattaactcatgagcttgagaagataggtttaaataaagag cggctcctacaggatgagcagagcactgatgacagtaggtacaaacttttggaatcaaaa ttagaatccactcttaagaagtctcttgaaataaaagaagaaaaaatcgctgctttagaa gctcggttagaagagtctacaaattacaatcagcaattgcgccatgaacttaaaacagtg aaaaaaaattatgaagctctcaaacagagacaagatgaggagaggatggtgcagagttcc cttccaatctctggggaagacgacaagtgggggcgggaaagtcaagaagcaactcgagag ctcctgaaagtcaaagacaggttaattgaagtagaaagaaataatgctacgctgcaagca gagaagcaggcgctgaaaactcaactgaagcaacttgagacacaaaataataatttgcag gctcagattcttgcactgcagaggcagacagtgtcattacaggagcagaataccactctt cagacacagaatgccaaacttcaggttgaaaattctacccttaattcacaaagtacttcg cttatgaaccagaatgcacagcttctaatccagcagtcttccttagaaaatgaaaatgaa tctataatgaaagaacgagaagatttgaagtctctttatgatgctctgataaaagatcat gagaagctggaacttcttcatgaacggcaagcttcagagtatgagtctctgatctctaaa catggcaccctaaagtctgctcacaaaaatcttgaggtggaacataaagaccttgaagac cgttacaatcagttattaaaacagaaaggacaattggaagatttggaaaaaatgatcaaa gtggaacaggaaaaaatgctgcttgaaagcaaaaaccatgaaatggtagccgcagagtac aagaagctttgtggagacaatgataggttaaatcatacatacagtcagcttttaaaagag actgaaattttacaaacggaccataaaaatttgaaaagtgttctaaataattctaaattg gaacaaacaagattagaagctgaattttcaaagctaaaggagcagtatcagcagctggat atcacatctaccaagctcaataaccagtgtgagttgctcagccaacttaaaggaaattta gaggaagaaaatcgacatctactcgatcagatacagacactgatgctacaaaacagaaca ctgctggaacaaaatatggaaagcaaggatctctttcatgttgaacaaagacaatacatt gataaattaaatgaattgagacgacagaaagagaaattagaagaaaaaattatggatcaa tacaaattttatgacccatctcctcctagaaggagaggcaactggattactctaaaaatg agaaagttgataaagtccaagaaagatattaaccgggaacgtcagaaatctctaacacta acacccacccgctcagactccagtgaaggatttcttcagctgccccatcaagacagtcaa gacagctcttcagtagggtcaaactctttagaagatggccaaaccctggggacaaagaag agcagcatggttgcactgaaaagactgccctttttgaggaacagaccgaaggataaagac aaaatgaaggcctgctaccgtcgttccatgtccatgaatgacctggtgcagtccatggtc ctagcaggaggacagtggacaggtagtactgaaaatttggaggtccctgatgatatttcc acgggtaaaaggagaaaagaattgggagctatggccttctctactacagccatcaacttt tcaactgtcaactcttctgcagccttccgatccaagcaattggttaataataaagatact acatcctttgaagatgtaagtccacaaggtattagtgatgactctagtacgggatcaaga gttcatgcttcaagaccagccagccttgatagtggcagaacatccactagcaatagcaat aataacgcttcactccatgaagtcaaagcaggtgcagctaatatccaaagcaggccacaa agccacagcagtggggatttcagtctgctccatgatcatgagacttggtctagcagtggt agcagtccagttcagtatttgaaaagacagaccaggtcaagccctatgctccagcacaaa atgtctgaaacagtagacagtcaagcccatcacaagatgaacgctggctccccaggaagt gaagttgttactctacaacagtttttggaagaaagcaacaagcttacctcaatacagttg aagtcctcgagtcaagagaatcttttagatgaagtaatgaaaagtttgtctgtctcttca gactttctggggaaagacaagccagttagctgtaccctggccaggtcagtaagtggaaaa gctccaggggacttctatgatagacggacagctaagcctgaatttttgagaactggtcct cagaagactgaagatgcctactccatcagctctgcagggaaacctacaccaagcactcaa gggaagataaaactagtaaaagaaacctctgtgttgagacaatcaaaagatagcaatcct tatgccactttacctcgtgcaagcagtgtgatctctactgctgaaggaacaactcgaagg acaagcatccatgattttctgagcaaggacagtagactgcccgtttcagttgagccagca ccgcctcctgctggtggcagcagcaccgcagcctctaatgtgaacaaagtacaagaaagc agaaattcaaaaagcaggtctagggagcaacaaagctcctaa

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