Rattus norvegicus (rat): 305614
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Entry
305614 CDS
T01003
Symbol
Sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04517
IgSF CAM signaling
rno04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
305614 (Sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
305614 (Sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rno04812
]
305614 (Sptbn1)
Cytoskeleton proteins [BR:
rno04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
305614 (Sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
305614 (Sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SCAR_helical
Motif
Other DBs
NCBI-GeneID:
305614
NCBI-ProteinID:
NP_001397203
RGD:
727922
Ensembl:
ENSRNOG00000005434
UniProt:
G3V6S0
LinkDB
All DBs
Position
14:complement(108042629..108217884)
Genome browser
AA seq
2363 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAESYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERIS
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEISNYRPTIDTLHEQAGALPQAHAESPDVKGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIRAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSSLNA
EAIRQRLADLKQLWGLLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNHMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKALLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPEPSAKVSEEAESQQWDTSKGDQVSQNGLPAEQGSPRMAGTMETSEMVNGAAEQRTSS
KESSPVPSPTSDRKAKSALPAQSAATLPARTLETPAAQMEGFLNRKHEWEAHNKKASSRS
WHNVYCVINNQEMGFYKDAKSAASGVPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLSD
GNEYLFQAKDDDEMNTWIQAITSAISSDKHDTSASTQSTPASSRAQTLPTSVVTITSESS
PGKREKDKEKDKEKRFSLFGKKK
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacggtggccacagactatgacaacattgagatccagcagcagtacagcgat
gtgaacaaccgctgggacgtggatgactgggacaatgagaacagctctgcacggctcttt
gagcgctcccgcatcaaggccctggcagatgagcgtgaagctgtacagaagaagaccttc
accaagtgggtcaactcccaccttgcccgagtgtcctgccgaatcacagacctgtacact
gaccttcgagatggacggatgctcatcaaactactggaggtcctctctggagagaggctg
cctaaacccactaagggacggatgcgcatccactgtctggagaatgtcgacaaggctctt
cagttcctgaaggagcagagagtccatctcgagaacatgggctcccatgatattgtggat
ggaaaccaccggctgaccctcggcctcatctggaccattatcctgcgcttccagatccag
gatatcagtgtggagactgaagataacaaagagaaaaagtctgctaaggatgcattgctg
ctgtggtgccagatgaagacagctgggtaccctaatgtcaacattcacaatttcaccact
agctggagggatggcatggccttcaatgcactgatacacaaacaccggcctgacctgata
gattttgataaactgaagaaatcgaatgcacactacaatctgcagaatgcatttaacctg
gcagagcagcaccttggccttactaaactgttagaccctgaagatatcagcgtggaccac
cctgatgagaagtccatcatcacgtatgtggtcacttactaccactacttctccaagatg
aaggccttggctgtcgaaggaaagcgcattgggaaggtgcttgataatgctatagaaaca
gagaaaatgattgagaagtatgagtcgcttgcttctgaccttctggagtggattgaacaa
accatcatcattctaaacaaccgcaaatttgctaattcactggttggggtccagcagcag
cttcaggcattcaacacgtaccgcacagtggagaaaccacctaagtttactgagaagggg
aatttggaggtgctgcttttcacaattcagagcaagatgagagctaataatcagaaggtc
tacatgccccgagaagggaagctcatctctgatatcaacaaggcctgggaaagactggaa
aaagcagaacatgagagagaactggctctgcggaatgagctcatacggcaggaaaaactg
gaacaacttgcccgcagattcgatcgcaaggcagctatgagagagacatggctgagcgaa
aaccagcgtcttgtctctcaggacaactttggatttgaccttcctgcagttgaggccgcc
accaaaaaacatgaggccatcgagactgacattgcggcgtatgaagagcgagtgcaggct
gtggtggctgtggccagggagcttgaagcagagagctatcatgacatcaagcgcatcaca
gcgaggaaggacaatgtcatccgcctctgggagtacttgctggaactgctcagggccagg
aggcagcgtcttgagatgaacctgggactgcaaaagatattccaggaaatgctttatatt
atggactggatggatgaaatgaaggtgctattgctgtctcaggactatggcaaacacttg
ctcggtgttgaagacttgttacagaagcatgccctggttgaagcagacattgcaatccaa
gcagaacgtgtgagaggtgtgaatgcctctgcccagaagttcgcaacagatggggaaggc
tacaagccatgcgacccccaggtaatccgagaccgtgtggcccacatggaattctgctat
caagaactctgtcagctggcagctgagcgtagggctcgcctggaagagtctcgtcgcctc
tggaagttcttctgggagatggcggaggaggaaggctggatacgggagaaggagaagatc
ctgtcctctgatgactatgggaaagacctgactagtgtcatgcgcctgctgagcaagcac
agggcttttgaggatgagatgagtggccgtagtggccattttgagcaggccattaaagaa
ggtgaagacatgattgcagaggaacactttggatcagaaaagatccgtgagagaatcagt
tacattcgagagcagtgggccaacctggagcagctctcagccattaggaagaagcgccta
gaggaggcctcattgctgcaccagttccaggctgatgctgatgacatcgacgcttggatg
ttagatatactcaagattgtgtccagcaacgatgtgggccatgatgagtattccacacag
tctctggtcaagaagcataaagatgtggcagaagagatctccaactacagacccactatt
gacacactgcatgagcaagccggtgctcttcctcaagcacacgcagagtctccagatgtg
aagggccggctggcaggaattgaggagcgttacaaggaggtggcagagttaacacggcta
aggaagcaggcactgcaggacaccctggctctgtacaagatgttcagtgaggctgatgcc
tgtgagctctggatcgacgagaaggagcagtggctcaacaacatgcagatcccagagaag
ctggaggacctggaagtcatccagcacagatttgagagcctagaaccagaaatgaacaac
caggcttcccgggttgctgtggtgaaccagattgcacggcagctgatgcacagtggccat
cccagcgaaaaggaaatcagagctcagcaggacaaactcaacacgaggtggagtcagttc
agagaactggtggacaggaagaaggatgctcttctgtccgccctgagcatccagaactac
cacctcgagtgcaatgaaaccaaatcctggatccgggagaagaccaaggtcatcgagtct
acccaagaccttggcaatgacctggcaggtgtcatggccctgcagcgcaagctgaccggc
atggaacgagacttggtagccatcgaggcgaagctgagtgacctgcagaaggaagccgag
aagcttgagtccgagcaccctgaccaggctcaagccatcctgtctcgactggctgagatc
agtgacgtgtgggaggagatgaagacaaccctgaagaaccgagaagcctcgctgggagag
gccagcaagctgcagcagttcctgcgggacttggatgacttccagtcttggctctccagg
acccagactgctattgcctcagaggacatgcccaataccctgactgaggcagagaagctt
ctcacacagcatgagaacatcaaaaacgagattgacaattacgaggaagactaccagaag
atgcgggacatgggcgagatggtcacgcagggacagactgatgcccagtacatgtttctg
cggcagcggttgcaggccttggacacaggctggaacgagctccacaaaatgtgggagaac
aggcaaaatctcctctcccagtcccatgcctaccagcagttccttagggacacgaaacag
gctgaagctttccttaataaccaggagtatgttttggctcatactgaaatgcccaccacc
ctggaaggagctgaagcagccattaagaagcaggaggacttcatgaccaccatggatgcc
aatgaggagaagatcaatgctgttgtggagactggccggaggctggtgagcgatgggaat
atcaactccgaccgcatccaggagaaggtggactctattgatgacaggcacagaaagaat
cgagaagcagccagtgaacttttgatgaggttaaaggacaaccgtgatctacagaagttc
ctgcaagattgtcaagagctgtccctctggatcaatgaaaagatgcttacagctcaggac
atgtcttatgatgaagccagaaacctgcacagtaaatggttaaagcatcaagcatttatg
gcagaacttgcatccaacaaagaatggcttgacaaaattgagaaggaaggaatgcagctt
atttcagaaaagccagaaacagaggctgtggtgaaggagaaactcactggtttacataaa
atgtgggaagtccttgaatccacaacccagaccaaggcccagaggctcttcgatgcgaac
aaggctgagctcttcacgcagagctgtgcagacctcgacaaatggctgcatggcctggag
agccagattcaatctgacgactatggcaaagacctcaccagtgtcaacattctgctgaaa
aagcaacagatgctggagaatcagatggaagtgaggaagaaggagatcgaggaactgcaa
agccaagcccaggcactgagtcaggaggggaagagcacagatgaggtggacagcaaacgc
ctcactgtgcagaccaagttcatggagcttctggagcccttgaatgaaaggaagcataat
ctgctggcttccaaggagatccaccagttcaacagggatgtagaggacgagattctgtgg
gttggcgagaggatgcctttggcaacttccacagatcatggccacaaccttcaaactgtg
cagctgttaataaagaaaaaccagaccctccagaaagaaatccagggacaccagcctcgt
attgatgacatctttgagaggagccaaaacatcatcacagatagcagcagcctcaatgcc
gaggctatcagacagaggctcgccgatctgaagcagctgtgggggctcctcattgaggaa
actgagaaacgccatagacggctcgaggaggcacacaaggcccagcaatactactttgat
gcagctgaagcagaggcatggatgagtgaacaggaactgtacatgatgtctgaggaaaag
gccaaggatgagcagagtgctgtctccatgttgaaaaagcaccagattttggaacaggct
gttgaggactatgcagagacagtgcaccagctctccaagaccagccgggcactggtggct
gacagccatcccgaaagtgagcgtattagcatgcggcagtcaaaggtcgacaagctgtat
gctggcctgaaggaccttgctgaggagaggagagggaaacttgatgagaggcacaggcta
ttccagctcaacagggaggtagatgacctggaacagtggatcgccgagagggaagtggtt
gcaggctcccatgagttgggacaggactatgagcatgtcacgatgttacaagaacggttc
cgagaatttgctcgagacacaggaaacattgggcaggagcgtgtagatacagttaaccac
atggcagatgacctcatcaattctggacattcagatgctgcgactattgctgagtggaaa
gatggtctcaatgaagcctgggctgacctcctggagctcattgacacgagaacacagatt
cttgctgcctcttacgaacttcataagttttaccatgatgccaaggagatctttggccgc
atccaggacaaacacaagaaactccctgaggagcttggaagagatcagaacaccgtggag
actttacagagaatgcacaccacctttgaacatgacatccaagctctgggcactcaggtg
aggcagctgcaggaggatgcagcccgcctccaagcagcctatgcaggggacaaggctgac
gacatccaaaagcgtgagaacgaggtcctggaagcctggaagtccctgctggatgcttgt
gagggtcgcagggtgcggctagtagacacgggagacaagttccgcttcttcagcatggtg
cgtgacctcatgctctggatggaagatgtcatccggcaaatcgaggcccaggagaaaccc
cgggatgtgtcatctgttgaactgttaatgaataatcatcaaggcatcaaagctgaaatc
gatgctcgtaatgacagttttacagcttgcattgaacttgggaaagccctgctggcaagg
aaacactatgcttctgaggagatcaaggaaaagttactgcagttgacggagaaaagaaaa
gaaatgatcgacaagtgggaagaccgatgggagtggttaagactgattttggaggtccat
cagttctcaagagatgccagtgtggctgaggcttggctgctgggacaggagccataccta
tccagccgcgaaatcggccagagtgtggatgaagtggagaagcttattaagcgccatgag
gcatttgaaaaatctgcagcgacctgggatgagagattctctgccctggaaaggttgaca
acattggagctactggaagtgcgcagacagcaagaggaagaagaaagaaagaggcgacca
ccgtctccggagccaagcgcgaaggtttcagaggaggctgagtcccagcaatgggacact
tcaaaaggagaccaagtttcccagaatggtttgccggctgagcagggatctccacggatg
gcaggaaccatggaaacaagtgaaatggtcaacggtgctgctgagcagaggacaagctcc
aaagaatccagtcctgttccttctcccacctcggaccgcaaggccaaatctgcacttcca
gcccagagtgctgccaccctgccagccaggaccctggagacgcctgcggcccagatggaa
ggcttcctcaatcggaagcacgagtgggaggcccacaataagaaagcctcaagcaggtcc
tggcacaatgtttattgtgtcataaataaccaagaaatgggcttctacaaagatgccaag
agtgctgcttctggcgtcccctaccacagtgaggtccctgtgagtttgaaagaggccatc
tgcgaagtggcccttgattacaagaagaagaagcatgtgttcaagctaagactaagtgat
ggcaacgagtacctcttccaagccaaagatgatgatgaaatgaacacatggatccaggct
atcacctctgccatctcctctgacaagcacgacacgtctgccagcacccagagtacgcca
gcatccagccgagcgcagaccttacccaccagcgtcgtcaccatcaccagcgagtccagt
cctggcaagagggagaaggacaaagagaaagacaaagagaagcggttcagccttttcggc
aagaagaagtga
DBGET
integrated database retrieval system
