Rattus norvegicus (rat): 305679
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Entry
305679 CDS
T01003
Symbol
Vcl
Name
(RefSeq) vinculin
KO
K05700
vinculin
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04510
Focal adhesion
rno04520
Adherens junction
rno04670
Leukocyte transendothelial migration
rno04810
Regulation of actin cytoskeleton
rno04820
Cytoskeleton in muscle cells
rno05100
Bacterial invasion of epithelial cells
rno05146
Amoebiasis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
305679 (Vcl)
04520 Adherens junction
305679 (Vcl)
09142 Cell motility
04820 Cytoskeleton in muscle cells
305679 (Vcl)
04810 Regulation of actin cytoskeleton
305679 (Vcl)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
305679 (Vcl)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
305679 (Vcl)
09174 Infectious disease: parasitic
05146 Amoebiasis
305679 (Vcl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rno04812
]
305679 (Vcl)
04147 Exosome [BR:
rno04147
]
305679 (Vcl)
Cytoskeleton proteins [BR:
rno04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
305679 (Vcl)
Exosome [BR:
rno04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
305679 (Vcl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
305679
NCBI-ProteinID:
NP_001100718
RGD:
1311217
Ensembl:
ENSRNOG00000010765
UniProt:
P85972
LinkDB
All DBs
Position
15:complement(3315069..3404891)
Genome browser
AA seq
1066 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVGKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL
DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
LLAKCDRVDQLAAQLADLAARGEGESPQARALASQLQDSLKDLKTQMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGAANKSTVEG
IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcacacgcgcacgatcgagagcatcctggagccggtggcgcagcagatc
tctcacctggtgattatgcacgaggagggcgaggtggacggcaaagccattcctgacctc
accgcgcccgtggccgctgtgcaggcggccgtcagcaacctcgtccgggttgggaaagag
accgttcagaccactgaggatcagattttgaagagagatatgccgccagcatttattaag
gtcgagaatgcttgcacgaagcttgttcaggcagctcagatgcttcagtcagacccatac
tctgttcctgcgcgggattacctcatcgacggctccaggggaatcctctctggaacgtct
gacctcctgcttacctttgatgaggctgaggttcgaaaaattataagagtttgcaaaggg
attttggaatacctcacagtggcagaggtagtggagactatggaagacttggtcacttac
acaaagaaccttgggcccggaatgacgaagatggccaaaatgatcgatgagagacagcag
gagttgacgcaccaggaacaccgtgtgatgctggtgaactcaatgaacactgtcaaagag
ctgcttcctgttctcatttcagctatgaagatttttgttacaaccaaaaactcaaaaaac
caaggaatagaagaagctctgaaaaatcgaaattttactgtaggaaagatgagtgctgag
attaacgagatcattcgtgtgttacaactcacctcctgggatgaggacgcctgggccagc
aaggacactgaagccatgaagagagcgctggcctccatagactcgaaactgaaccaggcc
aaaggttggctccgtgaccccaacgcttccccaggggacgccggtgagcaggccatcagg
cagatcttggacgaagctggaaaagttggtgaactttgtgcaggcaaggaacgcagggag
atcctaggaacctgcaagatgctagggcagatgactgaccaagtggctgacctccgagcc
agaggacaaggagcctcgccagtggccatgcagaaggcccagcaagtgtctcaggggctc
gacgtgcttactgcgaaagtggaaaatgcagctcgaaagctggaagccatgacgaactca
aagcagagtattgcgaagaagattgacgctgcgcagaattggctggcagatcccaatggt
ggacctgaaggagaagaacagatccgaggggctttggctgaagctcggaagattgctgag
ttatgtgatgatcctaaggagagggacgacatcctccgctctcttggagagatagcggct
ctgacctctaaattaggagacttgcgaagacaggggaaaggagactccccagaggctcga
gccttggctaaacaagtggcaaccgcgctacagaacctgcagaccaaaaccaatagggct
gtggccaacagcaggcctgccaaggcagccgtccacctggaaggcaagattgagcaggca
cagcggtggattgataaccctacagtggatgaccgaggagtcggtcaggctgccatccgt
ggacttgtggctgaagggcatcggctggccaatgtcatgatgggaccttatcgccaagat
cttctcgccaagtgtgaccgtgtagaccagctagcagctcagctggctgacctggctgcc
cgaggggagggggagagtcctcaggcgagagcgcttgcttctcagcttcaggactcctta
aaggatcttaaaacccagatgcaggaagctatgactcaagaggtgtccgacgttttcagc
gatactacaactcccatcaagctgttggcagtggcggccactgctcctcctgatgcgccc
aatagggaagaggtatttgacgagagagcagccaactttgaaaaccattcaggaaggctt
ggggccacggcagagaaggcagctgctgttggtgctgccaataaatcgacagtggaaggc
attcaggcatccgtgaagacagcccgagaactcactccccaggtgatctcagctgctcga
atcttactgaggaaccctggtaaccaagctgcgtatgaacattttgagaccatgaagaac
cagtggattgataatgttgagaaaatgacagggctggtggacgaggccattgataccaaa
tctctgttggatgcttctgaagaagcaattaaaaaagacctggacaagtgtaaggtagcc
atggccaatattcagcctcagatgctggtcgctggagcaaccagtattgctcgtcgggcc
aaccggattctgctggttgctaagagggaggtagagaactctgaggatccgaagttccga
gaggctgtgaaagctgcctctgatgaactgagcaaaacaatctcccccatggttatggat
gccaaggctgtggctggaaacatctctgaccctggcctgcaaaagagcttcctggactca
ggatatcggatcctgggagctgtggccaaagttagagaagccttccaacctcaggagcct
gacttcccgcctcctccaccagaccttgaacagctacgtctaactgatgagctggctcct
cccaaaccacctctgcctgagggtgaagtccctccacccaggccacccccaccagaagag
aaggatgaagagttccctgagcagaaagccggggaggtgattaaccagccgatgatgatg
gccgccaggcagctccacgatgaagctcggaagtggtctagcaagggcaatgacatcatc
gcagcagccaagcgcatggctctgctgatggcggagatgtctcggctggtaagagggggc
agtggtaccaagcgggcacttattcagtgtgccaaggatatcgccaaggcctctgatgag
gtgacgaggttggccaaggaggttgccaagcagtgcacagataagcggattagaaccaat
ctcttacaggtctgtgagcgaatcccaactataagcacccagctcaaaatcctgtccaca
gtgaaggccaccatgctgggccggaccaacatcagtgacgaggagtctgagcaggccaca
gagatgctggttcataatgcccagaacctcatgcagtctgtgaaagagactgtgcgagag
gccgaagctgcttcaatcaagattcgaacagacgccggatttactctgcgctgggtcaga
aagactccctggtaccagtag
DBGET
integrated database retrieval system
