Rattus norvegicus (rat): 305827
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Entry
305827 CDS
T01003
Symbol
Wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
305827 (Wdhd1)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
305827 (Wdhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Ctf4_C
HMG_WDHD1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_EML
HMG_box
Beta-prop_WDR19_1st
eIF2A
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_Nup120_160
NBCH_WD40
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
305827
NCBI-ProteinID:
NP_001100725
RGD:
1310200
Ensembl:
ENSRNOG00000011167
UniProt:
A6KE41
LinkDB
All DBs
Position
15:complement(22957492..23002820)
Genome browser
AA seq
1117 aa
AA seq
DB search
MPAIQKPMRYGHTEGHTEVCFDDSGSFIVTCGSDGDVRMWEDLDDDDPKSVNVGEKAFSC
ALKNGKLVTAVSNNTVQVYTFPEGAPDGILTRFTTNANHVVFNGDGTKIAAGSSDFLVKV
VDVMDNSQQQTFRGHDAPVLSLSFDPKDVFLASASCDGTVRVWNISDQTCAASWPVLRKS
NDVVNSESICRLAWQPKTGKFLAVPVEKSVKLYRRETWSNPFDLSDSSVTQTLNIVTWSP
CGQYLAAGAINGLIVVWNVETKECMERVKHEKGYAICGLAWHPTYSRICYTDVEGNLGIL
ENVCDLSGKLSSNKVPSGVEKDYSDLFDGDDTSSAGDFLNDNAVEIPSFSKGIRNEEDDN
DDLMLAADHVLGDDENSVDVTMLRNDLHREEGEDRQASSLHSLPLVKSQRPLYDGPMPTP
RQKPFQPSSTPLHLTHRFMAWNSVGIIRCYNDDQDSAIDVEFHDTSIHHATHLSNAFNYT
MGSLSHEAVLLACESADELASKLHCLHFSSWDSSKEWIVDMPENEDIEAICLGLGWAAAA
TSALLLRLFTIGGVQKEVFCLPGPVVSMAGHGEQLCIVYHRGTGFDGDQCLGVQLLELGR
KKKQVLHGDPLPLTRKSYLTWLGFSAEGTPCYVDSEGCVRMLNRGLGNTWTPVCNIREHC
KGKSDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVAILPFKLPYCQTSTEKGQMEEQ
FWHSVLFHNYLDYLAENGYDYEESIKKQAVKEQQELLMKMLALSCKLEREFRCVELADLM
TQNAVHLAIKYASRSRKLILAQKLSELAAEKAAELAEIQTEEREEDFRERLNAGYSHTTT
EWSQPRVRSQVEEDAEDREDTVSEGNPEPQNHGQNLIQSANSSDTPAMKSGAVFSSSQGR
VNPFKVLVSSKEPAVSVNATRSANILDNMNKLSRKSTSFNRVANNEKSPVIKPLIPKPRC
KQASAASYFQKRTSQAEKTEEVKENPKSSSSEAPAVCLQNSEVQRPKTGFQMWLEENRSH
IMSDNPDISDEADIIKEGMIRFRVLSAEERKEWTNKAKGGTASDGAEAKKRKRGVSEICE
TEKQEEAVKENLELSKKQKALDLSTNQKLSAFAFKQE
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgccggccatacagaagcccatgaggtacggacatacagaaggacacaccgaagtctgc
tttgatgattctggaagttttattgtgacttgtggaagtgatggtgatgtgaggatgtgg
gaagatttggacgacgacgatcctaagtccgttaatgttggagaaaaggcattttcatgt
gctttgaagaatgggaaattggtcactgcagtttctaacaataccgtccaagtctataca
ttccctgaaggagcacccgatggtatattaacacgcttcactacaaacgcaaaccatgtg
gtcttcaatggggacggcactaaaattgctgctgggtcaagtgattttctggtcaaagtc
gtggatgtgatggataacagccagcagcaaacatttcgaggacacgacgcccctgtttta
agtctgtcttttgatcctaaggatgtctttctggcatcagctagttgtgatggaaccgtc
agagtgtggaatatatctgatcagacttgtgctgctagctggccggtactgcgaaagagc
aatgatgtggtgaactcggagtccatctgcagactcgcatggcagcccaagaccgggaag
tttctagcagttcctgttgaaaaatctgttaagctgtacagaagagaaacttggagtaat
ccgtttgacctttcagacagttctgtcacccagacactcaatatcgtgacctggtctccc
tgtgggcagtatttggctgcaggtgctattaatggcttaattgtagtttggaatgtggaa
accaaagagtgcatggaaagagtaaaacacgagaaaggttatgcaatctgcggcctggcc
tggcatcctacctatagtcggatatgttacactgatgtggaaggaaacctgggaatcctg
gaaaatgtttgtgacctcagtgggaagttgtcaagcaataaggtacctagtggagtggaa
aaggattacagcgatctctttgatggagacgacacgagcagtgccggcgattttctgaat
gacaacgcggttgagatcccttcattttcaaaggggattagaaacgaggaggatgataat
gatgacctcatgctggcggcagatcatgtcttgggagatgatgaaaactcagttgatgtt
acaatgctaagaaatgatcttcatagagaggaaggggaagatcgccaggcaagcagtctt
cacagtctcccccttgtgaaatcccaaaggccgctttatgacgggcccatgccaacaccg
agacagaagccgttccagccaagttctacacccttgcatctcactcacagattcatggcg
tggaactctgttgggattattcgctgctataacgatgatcaagacagtgccatagacgtg
gagttccatgacacctccatccatcatgcaacccatctatccaatgctttcaactacacc
atgggcagtctttcccacgaagctgttctgttggcttgtgaaagtgccgatgaattagca
agcaagcttcactgcttgcacttcagttcttgggattcaagcaaagagtggatagtagat
atgcctgagaatgaggatatcgaagccatatgtctcgggctgggctgggccgccgctgct
acctctgccctgctcctccgactgtttactattggaggcgttcagaaggaagtcttctgc
cttcctggacctgtggtgtccatggcgggacacggagaacagctttgcattgtttatcac
agaggtacagggttcgatggagatcagtgccttggagttcaactgctagagctggggcgg
aagaaaaaacaggttttgcatggtgaccctcttcctcttacaaggaaatcctaccttaca
tggctggggttttctgctgaaggtaccccctgctacgtggactccgaaggctgtgtgcga
atgcttaacagaggacttgggaatacatggactcctgtatgtaacatcagagagcactgc
aaaggaaagtctgatcactactgggtggttggcattcatgagaacccccagcagctaagg
tgcatcccttgtaaaggttctcggtttcctcccacccttccacgacctgctgtagcaata
ttaccttttaaacttccttattgtcagacttcaacagagaaaggccaaatggaggaacaa
ttttggcattcggttctgtttcacaactaccttgattacttggctgaaaatggttatgat
tatgaggagagcattaaaaaacaggcagtaaaagagcagcaggaactcttaatgaagatg
cttgcgctgtcttgtaaactggaacgagaattccgctgtgtggaacttgcagatctaatg
actcaaaatgctgtgcatttagccattaaatatgcttctcgctctcggaaattaatattg
gctcaaaaacttagtgaacttgccgcagaaaaggcagccgagttggcagaaatccagaca
gaagagagagaagaggatttcagagaaagactgaatgctggttacagccataccactaca
gagtggagtcagccacgggtcagaagtcaagttgaagaagatgctgaggacagagaagac
accgtttcagaaggaaatccagagccacagaaccatgggcagaacttaatccaaagtgca
aattcctctgataccccagctatgaaatcaggtgcagttttctctagcagccaaggacgg
gtaaaccccttcaaggtactagtcagttccaaagaaccagccgtctcagtgaatgcaaca
cgctcagctaatattttagacaatatgaacaaattatccaggaagtccacttcttttaat
cgagtagcaaataatgaaaagtctccagttataaagcctctcattcccaagccaaggtgt
aagcaggcgtctgcagcatcctatttccagaaaagaacctcacaggccgagaagactgaa
gaagtaaaagaaaatcctaaaagttcgtcatctgaagctccagccgtgtgccttcaaaac
tcagaagtccaaaggccgaagaccgggttccagatgtggctggaggaaaatagaagtcat
attatgtccgacaaccctgacatttcagatgaagcagatataataaaagaggggatgatc
cgatttagagtactgtccgccgaagaaaggaaggaatggactaacaaggccaagggagga
actgccagcgatggagctgaggcaaagaagcgaaaacgtggggtcagtgagatctgtgag
acggagaagcaggaagaggcagtgaaggagaatctggagctgtctaaaaagcaaaaggca
ttagatctttctactaatcagaaattgtcagcttttgcatttaagcaggaataa
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