Rattus norvegicus (rat): 305938
Help
Entry
305938 CDS
T01003
Symbol
Spata13
Name
(RefSeq) spermatogenesis-associated protein 13
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
305938 (Spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
305938 (Spata13)
Membrane trafficking [BR:
rno04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
305938 (Spata13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
305938
NCBI-ProteinID:
NP_001178615
RGD:
1307364
Ensembl:
ENSRNOG00000013707
LinkDB
All DBs
Position
15:38954585..39083752
Genome browser
AA seq
1247 aa
AA seq
DB search
MTTAQDGHGQGATATCSASNPKAPKMVTSSACQNGGCKSSSSDPEAGEARLSPSKLVRLF
SGSRKRMNSNSERPRSVVVVGNSSTWNALASFRKMGSFKRLKSSVLQGIQNREGAEVSKE
ESSGDQGRAAPNGTIAILGKGLGRCASLGPVGDGAGSDCSDPEDTEDAFQRSTHRSRSIR
RAYGLGRISLLDLGRQSVPEPAVCEIQVRDPEPSRAVPLPRRSKSIDSLSVLKSSFKRKS
ASNLTELQGDRQVPSRTLSSFFTDSEKPGGSERRTRRWRSPIRAKDFDRVLKLVSNVKEA
AWKRETPRSAAPSPGSGLGDANPLLAPRSKLHDDYSRRTSSSVEPDARRGGPLSSPCASA
PCTAAPYTAPEPHLDVDTAVFPLESKSAQPLGTDGPHTSSSSPIPTDTEGLSQASSEAHT
GSQHPFDPVQLPTPLRPTTPKPQSPQSPGSTKCPSSLSVLSLSSADSEERSEDAVHRQAG
PMSLQDAVPAAAGDVGGENSESSFPSNPDGATSPEERKEEVRVVTEDDWRQGSALEEEQN
EAPRISRRKWGSGRRTGPRPLSDYGQLASRSLSIPEDAIATDPPGEDRVDRMHPASVTTT
SQDPCTSSGCPRGGRRRRPISVIGGVSFYGNTQAEDVENLLVQPAARPPVPAHQVPPYKA
VSARLRPFTFSQSTPIGLDRVGRRRQMKTSNVSSDGGAESSALVDDNGSEEDFSYEELCQ
ANPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDDQELGFKAGDVIQVLEASNKDWW
WGRNEDKEAWFPASFVRLRVNQEELPEPCSSSQGEEQDEDASKARHKHPESQQQMRTNVI
QEIMNTERVYIKHLKDICEGYIRQCRKHTGMFTVGQLATIFGNIEDIYKFQRKFLKDLEK
QYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACVELSNLMKQSKYRHFFEACRLLQ
QMIDIALDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYNNIKAAYEAMKNVACLINERK
RKLESIDKIARWQVSIVGWEGLDILDRSSELIHSGELTKITRQGKTQQRVFFLFDHQLVS
CKKDLLRRDMLYYKGRMDMDEVDIVDVEDGRDKDWNLSMRNAFKLVSKATDEVHLFCARK
QEDKARWLQAYADERRRVQEDQQMGMEISENQKKLAMLNAQKAGHGKSKGYNSCPVAPPH
QSLPPLHQRHITVPTSIPQQQVFALAEPKRKPSLFWHTFHKLTPFRK
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagcccaggatggccatgggcaaggtgccacagccacttgttcagcctccaac
ccgaaggcccccaaaatggtgacgtcctcagcatgtcagaatggaggctgcaaaagcagc
tccagtgatcccgaagctggggaagccaggctcagtccttccaagctggtacgtctcttc
tctggtagtcggaagaggatgaattccaactctgagagacctcgctcggtggttgttgtg
gggaattcctccacatggaatgccctggcctccttccgtaaaatgggctcttttaaaaga
ttgaaatcgtccgtccttcaaggaattcagaaccgggagggggcggaagtttccaaggag
gagtcatcaggagaccagggaagggctgcccccaatggcaccattgccatcctgggaaag
ggcctgggcaggtgtgcatccttgggccctgtgggagatggggccgggtctgactgctct
gaccctgaggacacagaggatgccttccagaggagcacgcatcgttcgcgcagcatccgc
agggcctatggcctgggccgcatcagcctgctggacctggggcggcagtcagtgccagag
cctgcggtgtgtgagatccaagtgcgcgaccctgagcccagcagggccgtgcctctgccg
cgcagaagcaagagcatcgacagcttgagcgtcctgaagagctccttcaagcgcaagtct
gcgtccaacctcacggaactgcagggtgacaggcaggttccctccaggaccctgagcagc
ttctttacagactctgagaagccgggtggctcagagagaagaaccagacgctggaggagc
cccattagggccaaggacttcgacagagtcctgaaactggtgagcaatgtcaaggaggcg
gcctggaagagggagacccccaggagtgcagcccctagccctggttccggtctgggggat
gcgaacccactacttgcgccaagaagcaagctacacgatgactactcgcgccgtaccagc
agcagcgtggagccagatgccaggcgtggtggccctttgtcctcaccctgtgcctctgca
ccatgcactgctgctccctacacagctccagaaccccaccttgatgtggatactgcagta
ttccccctggaaagtaaaagtgctcagccactgggaactgatggacctcacaccagcagc
tcctcaccaatccccacagacacagaagggttgagccaggcctccagtgaggcacatact
ggcagccagcatccctttgaccccgtgcagcttcccactcctctgaggcccaccacaccc
aagccccaaagcccacagagcccagggagtactaagtgccccagcagtctaagtgtactg
tccctcagttcggcggacagtgaagaacggtcggaggatgccgtgcacaggcaggcagga
cccatgtccctccaggatgccgttcccgccgctgctggtgatgttgggggagaaaacagt
gagagctcttttccctcgaatcctgacggagccaccagtccagaagagaggaaggaggag
gtaagggtggtgactgaggatgactggcggcagggctcagccctggaggaggagcagaat
gaggcacctcgaatctccaggaggaagtggggctccgggaggcgcaccgggccacgaccg
ctgtctgactatggccagctggccagcagaagcttgtccattcccgaagatgccattgca
acagatcctccaggtgaagaccgcgtggacaggatgcacccagcaagtgtgaccaccacc
agccaggatccatgcacctcctcaggctgtcccaggggaggccggagaaggcgacctata
tctgtgatcggaggggtcagcttctatggcaacacccaggcagaggatgtggagaacctc
ttggtccaaccagcagccaggcctcctgtgcctgcacaccaagttccaccctacaaggct
gtgtctgcccgcctccggcccttcaccttctcccagagcactcccatcgggctggaccgt
gtggggcgtcgacggcagatgaaaacatccaatgtctcttcggatggaggtgcggagtcc
tcggccttagtggatgacaatggtagtgaggaagacttcagctatgaggagctctgccag
gccaaccctcgatacctccagccgggcggggaacagctggccatcaatgagctcatcagc
gatggcagcgtggtctgtgcagaagcactgtgggaccatgtgaccatggatgaccaggaa
ctaggcttcaaggccggagatgtcatccaggtcctggaagcctccaacaaggactggtgg
tggggccggaatgaagacaaagaggcctggttccctgccagctttgttaggcttcgagtc
aaccaggaggagctgcccgagccctgcagcagctcccagggggaggagcaggacgaggac
gccagcaaagcccgccacaagcaccccgagagccagcagcagatgcggaccaacgtcatc
caggagatcatgaacaccgagcgagtgtacatcaagcacctcaaggacatctgcgagggc
tacatccgacagtgtcgtaagcacacgggaatgttcaccgttgggcagctagccactatt
ttcggaaacattgaagacatttacaaattccaaaggaagtttctgaaagacctcgagaaa
cagtacaacaaagaagaacctcacttaagtgagataggatcctgctttcttcagcaccaa
gagggctttgccatctactctgagtactgtaacaaccacccaggagcctgtgtggagttg
tccaacctcatgaagcagagcaagtaccggcacttctttgaggcctgccgcctgctccag
cagatgatcgatatagccctggatggcttcctcctcacaccggtgcagaagatctgcaaa
tacccgctgcagctggctgagctgctcaagtacaccacccaggagcacagcgactacaac
aatataaaggcggcctatgaagccatgaagaatgtggcctgcttgatcaatgaacgcaag
cgtaagctagagagcatcgacaagatcgcccgctggcaggtgtccatcgtgggctgggag
ggcctggacattctggaccgaagctccgagctgattcactccggagagctaaccaagatc
accaggcagggcaagacccagcagcgagtcttcttcctgttcgaccaccagctggtgtcc
tgcaagaaggacctgctgcgcagggacatgctatactacaagggccgcatggacatggat
gaggtggacattgtggatgtggaggatgggcgggacaaggactggaacctcagcatgcga
aacgccttcaagttggtcagcaaagccacggatgaggttcacctgttctgcgccagaaag
caggaggacaaggccaggtggctgcaggcctatgcggacgagaggcggcgggtgcaggaa
gaccagcagatgggaatggaaatctcagaaaatcagaagaaactcgccatgttgaacgcc
cagaaggcaggacatgggaaatctaaaggctacaacagctgccctgtggccccaccccac
cagagcctgccacccctccaccagcgccacatcactgtgcctaccagcatcccgcagcag
caggtcttcgccttggctgagcccaagaggaagccatcgctgttctggcacaccttccac
aaactcaccccattccggaagtga
DBGET
integrated database retrieval system
