Rattus norvegicus (rat): 305955
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Entry
305955 CDS
T01003
Symbol
Zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
305955 (Zc3h13)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
305955 (Zc3h13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_DUS3L
Plasmodium_HRP
zf-CCCH_2
zf-CCCH_PAN3
Motif
Other DBs
NCBI-GeneID:
305955
NCBI-ProteinID:
NP_001163942
RGD:
1307729
Ensembl:
ENSRNOG00000011237
UniProt:
E9PSN4
B0BN80
LinkDB
All DBs
Position
15:57016686..57081201
Genome browser
AA seq
1728 aa
AA seq
DB search
MSKIRRKVTVENTKTISESTSRRPSVFERLGPSTGSTTETQCRNWLKTGSCLYGNTCRFI
HGPSPRGKGYSSNYRRSPERPTGDLRERMKNKRQDVDSESQKRNTEESSSPVRKESSRGR
HRDKEDIKIVKERTPESEEENVEWETNRDDSDNGDINYDYVHELSLEMKRQKIQRELMKL
EQENMDKREEIIIQKEVSPEVVRSKLSPSPLRKSSKSPKRKSSPKASSAGKKERKAAVVA
SPLLDQQRNSKSNQSKKKGPRTPSPPPPILEDIILGKKYKEKYKVKDKIEEKPRDGKDRG
RDFERQREKRDKPRSSSPGQHHSPLSSRHHSSSSQSGSSIQRHSPSPRRKRTPSPSYQRT
LTPSLRRSASPYPTHCLSSPQRKQSPPRHRSPMREKGRHDHERTSQSHDRRHERREEARG
KRDREKDTREERESEHDHRDDREPRDSRDRRDTRDRRELRDSRDMRDSREIRDYSRDTKE
SRDPRDSRSARDVHDYRDREARDAHARDVRDVRDARDARDVRDVRDVRDARDVRDVRDAR
DVRDARDVRDVRDVRDVRDTRDARDARDARDGHRKEDVYQEEARSYGRNHLREESSRVEL
RNDSRNESRSEIRNDRMGRSRGRGPELPEKGGRSTRGSQMDSHSSGSNYHDSWETRSSYP
ERDRYPERDTRDQARDSSFERRHGERDRRDNRERDQRPSSPIRHQGRSEELEREERREER
RIDRVDERRDERVRDRDRERERERERERDREREREREKERERELERERAREREREREKER
ERERERERDQRDRDHDREREREREREREKEREREERERERERERERERERERERERERER
ERERERAREREKERERQREWEDKDKGRDDRREKREDVHVREDRIPRDGHEERKSKKRYRN
EGSPSPRQSPKRRREHSPDSDTYHSGDDKNEKHRLLSQVVRPQESRSLSPSHLTEDRQGR
WKEEERKSERKESSRRYEEQELKEKLSCGDRQREQTESVDGGSRARSAQDLLSHRQAEDR
DRDGSDRAHDEKKKAKAPKKPVKKKREEDVGIERGNPETHEDSQVFSPKKGQKKKNIEKK
RKRSKGDSDVSDEEAAPQSKKKRGPRTPPLAIKEELIEISTDKEGILEDPLKKEDTAFSD
WSDEDVPDRTDGLEAEHTAAAATPGSTPSPMSSLLPPPPPVAAAGTAATALAASAISATT
STTISSSGATSNINASEDSHRKCHRARGEKVEVSHVTLEDTPHRKLVDQKRSSSLGSNRS
HRSHTSGRLRSPSNDSAHRSGDDQGGRKRVLHSGSRDREKTKSLELTGERKSRIDQLKRG
EPSRSTSSDRQDSRSHSSRRSSPESDRQVHSRSGSFDSRDRLQERDRYEHDRERERERRD
PRQREWDREADKEWPRTRDRDRLRERERDRDKRRDLDRERERLVADPMERDRERDRTFET
SQLESVKRSEVKLESEHDRDLEGSSRDSVALDKERMDRDLGSAQGFEDVSKAERTESLEA
GDDESKLDDAHSLGSGAGEGYEPISDDELDEILAGDAEKREDQQEEEKMPDPLDVIDVDW
SGLMPKHRKEPREPGAALLKFTPGAVLLRVGISKKLAGSELFTKVKETCQQLLEKPKDAD
SLFEHELGALNMAALLRKEERASLLSDLGPCCKALCFRRDSAIRKQLVKNEKGTVKQAYT
NTPMVDNELLRLSLRLLKRKTSCHTPGQEKTEDGKLAPCSGQQELCVS
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattaggaggaaggtcacagtggaaaacaccaagaccatatctgaaagcaca
tcccgaagacctagtgtgtttgagaggcttggacccagcactggaagcacaacagagaca
cagtgccgtaactggctgaagaccggcagctgcctctatggaaacacatgtaggttcata
catggcccttcacctcgtgggaaaggttacagcagcaattacagaaggtcaccggaaagg
cctacaggtgatctcagagaaagaatgaagaataagcgtcaggatgtggattctgaatcc
cagaaacggaacacagaggagtcatcctcacctgttaggaaagaatcttcaagagggaga
catagagacaaggaagacataaaaattgttaaagagagaactccagaaagcgaagaagaa
aacgtagaatgggaaaccaacagagatgattctgacaatggagatattaattacgattat
gttcatgagttatcattggaaatgaagcgtcagaaaatacagagagaattaatgaagttg
gaacaagaaaacatggataaaagagaagaaattattattcaaaaggaggtttccccagaa
gtggtgagatcaaagttgtctccatcacctctgagaaagtcgagtaaatctccaaagcgg
aagtccagccccaaggcatcttcagctggcaagaaagagcggaaggctgctgtggtggct
tccccgctgctggaccagcagagaaattcaaaaagcaaccaaagtaaaaagaaagggcca
cgcactcctagtccacctcctcctatactagaagatatcattctgggaaaaaaatacaaa
gaaaagtataaagtgaaagacaagatagaagaaaaaccaagagatggaaaggacagagga
cgggattttgaaaggcaaagagaaaaacgagacaaaccaaggtcttcctccccgggacag
caccattctcctctgtcttctagacatcactcgtcgtcctcacagtcagggtcatctatt
cagagacattctccctctcctcgccggaaaagaactccttccccatcctaccagaggact
ttaactccatctttacgacgttctgcatctccttatccaacccattgtctgtcttctcct
cagagaaagcaaagtcctccaagacatcgctctccaatgagagagaaagggaggcatgat
catgaacggacttcacagtcacatgatcggcgtcatgaaaggagggaagaagctcgaggc
aaaagggatagagaaaaggacaccagagaagagcgagagtctgaacatgaccacagggat
gacagagaaccgcgagacagtcgggaccggagagacactagagaccgcagggaacttaga
gactccagagacatgcgggactccagagagataagggattatagcagagacaccaaggag
agccgtgatcccagagattcccggtcagctcgggatgtccatgactacagggaccgtgaa
gctcgggatgctcatgctcgagatgttcgggatgtcagggatgctcgagatgctcgagat
gttcgggatgtccgggatgtcagggatgctcgagatgtccgggatgttcgggatgctcga
gatgtccgggatgcccgggatgtccgggatgttcgggatgtccgggatgtccgggacacc
agagatgcccgggatgcccgggatgctcgagatggtcatcgaaaggaggatgtataccag
gaagaagcccgtagttatggcagaaaccacctgagagaagagagttctagagttgaacta
aggaatgactctagaaatgagtctcgaagtgaaattagaaatgaccgcatgggcagaagt
agggggagaggtccagaactgcctgaaaagggaggtcgaagcacaagaggttcccaaatg
gatagccacagtagtggcagcaactaccatgacagctgggaaactcgaagtagctatcct
gaaagagacagataccctgagagagataccagagatcaagcaagggattcttcctttgag
agaaggcatggagaaagagaccgtcgggataacagagaacgagatcaaagaccaagctca
cctattcgccatcaggggaggagtgaggagcttgagcgagaggaaagaagagaggaaaga
cgaatagacagagtggatgagagacgagatgaaagggtcagagacagagatagggagaga
gagagagagcgggagagggagagagatcgggaacgggagcgggagcgggaaaaggaaaga
gaaagagaactagaaagagagagagctagagagcgggagagagagagagagaaagagagg
gagagagagcgagaaagagaaagagatcagagagatcgtgaccatgatcgagagcgagaa
agagagagggagcgagagagggaaaaagaacgggagcgagaagagagagagagggagaga
gaaagggaaagggaacgggaaagagaaagggaacgggagcgggagagagagcgagaacgt
gagcgggagcgagaaagggccagagaaagagaaaaagaacgagagcggcaaagagaatgg
gaggataaagacaagggacgcgatgaccggagggagaagcgcgaggacgttcatgttcga
gaggacaggatccccagagacggccacgaggagagaaagtccaagaaacgctatagaaat
gaagggagtcccagcccccggcagtcccccaagcgccggcgggagcattctcctgacagt
gacacctaccacagtggggatgacaaaaatgaaaagcatagactcttgagccaggtcgta
cggccacaggaatctcgttctctcagcccgtcccacctcacagaagacaggcagggtaga
tggaaagaggaggagcgtaaatcggaaaggaaggagagttcaaggcgctatgaagaacaa
gaactcaaagagaagctttcttgtggcgacaggcaaagggagcagacagaaagcgtggac
ggcggctcgagagcgcgcagcgcgcaagacctgctcagccatcgccaggctgaagaccgc
gaccgagatgggtctgatcgagcccatgatgaaaagaaaaaagcaaaagctccgaagaaa
cccgtaaagaaaaagagggaggaggatgttggaatagagaggggcaaccctgagacacac
gaggatagtcaagtgttttcaccaaaaaaaggacagaaaaagaaaaacattgaaaaaaag
cgtaaaagatccaagggggattctgatgtttctgacgaagaggcagccccgcagagtaag
aagaagaggggtccacgcacaccccctcttgccatcaaggaggagctgattgagatttcc
actgacaaggaaggcatccttgaggatcccctgaagaaagaagataccgcctttagtgac
tggtctgatgaggatgtgcctgaccgcacagacggcttggaagctgagcacactgcagcc
gcggccactcccgggagcaccccttcccccatgtcgtctcttctccctcccccgccccct
gtggctgctgccggtactgcagccactgctcttgccgcctcagccatttctgccaccacc
tctaccaccatttcaagctctggtgccacctccaatatcaatgccagtgaagactcacac
agaaaatgccacagggcacgaggggagaaggtagaggtgtctcatgtgaccctggaagat
acaccacatcgcaaactggtggatcaaaagagaagcagcagcctgggaagcaatcggagt
caccgcagccatacctctggtcgcctgcgctccccatctaatgattctgcacatcgaagt
ggggacgatcagggtggtcggaagagagtgctccacagtggctccagagatagagaaaag
acaaagagcctagagctcacaggagagagaaaatctaggatcgatcagttaaagcgtgga
gagcccagtcggagtacttcttcagatcgccaggattccagaagccacagctccagaaga
agctctcctgagtcagaccgacaggttcactccaggtctgggtcatttgacagcagagac
cggcttcaagaacgagataggtatgagcatgacagagagcgtgagagggagcggagagat
cccagacaaagggagtgggaccgggaagcagacaaagagtggcctcggacccgagaccgt
gatagacttcgggaacgcgagagagaccgagacaaaaggagagacttggacagagagaga
gagagactggtcgccgaccccatggaaagagacagagaacgagatagaacttttgagacg
tctcagttggaatctgtgaagcgaagtgaagtcaaattggagagtgaacacgacagagac
ctggagggcagctcccgggactctgtggccttggacaaagaaaggatggacagagacctg
gggtctgcgcaggggtttgaggatgtgagtaaagcggagagaacagagagtctggaagca
ggagatgacgagtccaagttagatgatgcgcattcgttagggtctggtgctggggaaggc
tatgagcccatcagtgacgacgagctagatgaaattctggcaggggatgcagaaaagaga
gaggaccagcaggaagaggagaagatgccagatccattagatgtgatagatgtggactgg
tctggactaatgccaaagcatcggaaagagccgagagagcccggggctgcactcttaaag
ttcacacccggagccgtgctactacgagttgggatttctaaaaagttggccggttctgag
ctctttacaaaagttaaagaaacatgtcaacaacttctagagaaacccaaagatgcagac
agcctttttgaacatgaactaggggctctcaacatggctgctttacttcgaaaagaagag
cgggcgagtctccttagtgacctgggaccatgttgtaaagcattatgtttcagacgggat
tctgcaatccggaagcagcttgtgaagaacgaaaagggaaccgtgaagcaggcgtacacc
aacactccgatggtggacaacgagctgcttcggctgagtcttcggttactcaagaggaag
acttcctgccacacccctgggcaggaaaagactgaagatgggaaattagccccgtgcagt
ggccagcaggagctgtgtgtgtcctag
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integrated database retrieval system
