Rattus norvegicus (rat): 306013
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Entry
306013 CDS
T01003
Symbol
Lgi3
Name
(RefSeq) leucine-rich repeat LGI family member 3 precursor
KO
K19999
leucine-rich repeat LGI family member 3
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
306013 (Lgi3)
Membrane trafficking [BR:
rno04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
306013 (Lgi3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRR_9
FG-GAP_3
LRRCT
stn_TNFRSF12A
LRR_1
Motif
Other DBs
NCBI-GeneID:
306013
NCBI-ProteinID:
NP_001100747
RGD:
1311079
Ensembl:
ENSRNOG00000011323
UniProt:
D3ZN61
A6HTL0
LinkDB
All DBs
Position
15:52015317..52022445
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AA seq
548 aa
AA seq
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MARLRARRGPMCRLLVLSTLGFYLMLQASAKRPPKTPPCPPSCSCTRDTAFCVDSKSVPK
NLPSEVISLTLVNAAFSEIQDGAFSHLPLLQFLLLNSNKFTLIGDNAFTGLSHLQYLFIE
NNDIWGLSKFTFRGLKSLTHLSLANNNLQTLPRDIFRPLDILSDLDLRGNALNCDCKVKW
LVEWLAHTNTTVAPIYCASPPRFQEHKVQDLPLREFDCITTDFVLYQTLSFPAVSAEPFL
YSSDLYLALAQPGASACTILKWDYVERQLRDYDRIPAPSAVHCKPMVVDGQLYVVVAQLF
GGSYIYHWDPNTTRFTKLQDIDPQRVRKPNDLEAFRIDGDWFFAVADSSKAGATSLYRWH
QNGFYSHQALHAWHRDTDLEFVDGEGKPRLIVSSSSQAPVIYQWSRTQKQFVAQGEVTQV
PDAQAVKHFRAGRDSYLCLSRYIGDSKILRWEGTRFSEVQALPSRGSLALQPFLVGGHRY
LALGSDFSFTQIYQWDEGRQKFVRFQELAVQAPRAFCYMPAGDAQLLLAPSFKGQTLVYR
HVVVDLSA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcccggctacgagccaggcggggccctatgtgccggctactggtgttgtccacgttg
ggtttttacctaatgctgcaagccagtgccaagaggcctcctaagacgcccccctgccca
cccagctgctcctgcaccagggatacagccttctgcgtggactctaagtcggtgcccaag
aacctgccttcagaggtcatctccctgacactggtgaatgctgccttctcagagatccag
gacggagccttctcccacctgccactgttgcagttcttgttactcaactccaacaagttc
acgctgattggagacaacgccttcacaggactgtcgcacctgcagtacctcttcatagaa
aacaatgatatctggggtctctccaagtttaccttcagaggattgaagtccttgacacac
ctctctctggccaacaataacctccagacactgcccagagacatctttcgtcccctggac
atcttgagtgacttggacctccggggcaacgcacttaactgtgactgcaaggtaaagtgg
ctggtggagtggctggcacacaccaacaccacagtggcccccatctactgtgccagcccg
ccccgcttccaggagcacaaggtgcaggacttgcctcttcgggaattcgactgtatcacc
actgattttgtcctctaccagactctgtccttcccagcagtgtctgcagaacccttcctt
tactccagtgacctctatttggctctggcccagcctggtgccagcgcctgcaccatcctc
aagtgggactatgtggaacgacagcttcgtgactatgatagaattccagccccctcagct
gtgcactgcaagccaatggtggtggatggccagctctatgtagtcgtggcccagctgttc
ggtggctcatatatttaccactgggacccgaacaccacccgcttcaccaagctgcaggac
atcgacccacagcgcgtgcgcaaacccaatgacctggaagctttccgcatcgatggtgat
tggttcttcgcggtggctgacagttccaaagcaggtgccaccagcctctaccgttggcac
cagaatggcttctattcccaccaggccctgcacgcctggcaccgcgacactgacctggag
tttgtggatggtgagggcaagccacggttgattgtgtctagcagttctcaggcacctgtc
atctatcaatggagtcgtactcagaaacagtttgtggctcagggagaggtgactcaggtg
cctgatgcccaggctgtgaaacactttcgtgctggccgagacagctacctgtgccttagc
cgctatattggtgactccaagatcctgcgctgggagggtacccgtttctcagaggtgcaa
gcccttccctcccgaggttcactggccctacagcccttcctggtgggcggtcaccgctac
ctggcactgggcagtgacttctccttcacccagatctaccagtgggatgaggggcgacag
aaatttgtacggttccaagaactggcagtacaggcccctcgggccttctgctacatgcct
gctggagatgcccagctgctcctggcccccagtttcaagggacaaacactggtttaccga
catgttgtggtggaccttagtgcctag
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