Rattus norvegicus (rat): 306055
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Entry
306055 CDS
T01003
Symbol
Pcdh17
Name
(RefSeq) protocadherin-17 precursor
KO
K16499
protocadherin delta 2
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
306055 (Pcdh17)
Cell adhesion molecules [BR:
rno04515
]
Cadherins
Protocadherins
306055 (Pcdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
NUC153
PepSY
Motif
Other DBs
NCBI-GeneID:
306055
NCBI-ProteinID:
NP_001100749
RGD:
1304753
Ensembl:
ENSRNOG00000008970
UniProt:
A6HU20
D3ZPN0
LinkDB
All DBs
Position
15:66631549..66725007
Genome browser
AA seq
1208 aa
AA seq
DB search
MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGKDARLQPGLPPAERGSGSGRS
KSGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNAKCQLSLEVFANDKEICMIK
VEIQDINDNAPSFPSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDDHGLF
ALDVKSRGDGTKFPELVIQKALDRELQNHHTLVLTALDGGEPPRSATVQINVKVIDSNDN
SPVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSIDPK
TGLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVRQG
ALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGGGGLGGPGSVPFKLEENYDN
FYTVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSFAVKILDENDNPPRFTKGLYVLQ
VHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALRSF
NYEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPRN
AGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDHLFEIDPSSGEIRTLHPFWEDVTPVVE
LVVKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPRVNGEQHHWDMSLPLIVTLSTISIILL
AAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEERNAM
NVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQGHAGCHSSFTGQG
TNSSETPATRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADS
DQDTNKGSCCDMSVREALKMKTTSTKSQPLEQEPEECINCTDECRVLGHSDRCWMPQFPA
ANQAENADYRTNLFVPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKPYLK
AKRALSPLLQEVPSASSSPTKACIEPCASTKGSLDGCEAKAGALAEASSSYLPTDSQYPS
PSKQPRDPSFMASEQMARVFADVHSRASRDSSEMGAVLEQLDHPNRDLGRESVDAEEVVR
EIDKLLQDCRGNDPVAVRKNNNGFDQTYIRTELMKLKEKGEKKEREREREEIGEKKKEDE
TSYLLTIC
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttccatctgttgctgctttcttttgtgggcccctgccctgacactcaaaaac
ctcaactattcagtaccagaggagcaaggggccggcacggtgataggcaacatcggcaag
gatgcccgactgcagcccgggcttccgcccgctgagcgcggcagcggcagcgggaggagc
aagtccggcagctaccgggtgctggagaactccgcaccacatctgctggacgtggatgct
gacagcgggctcctctacaccaaacagcgaatcgaccgtgagtccttatgccgccacaat
gccaagtgccagctctccctagaggtgttcgctaacgacaaggagatttgcatgatcaag
gtagagatccaggacatcaacgacaacgctccctcttttccctcagatcagatagaaatg
gacatctccgagaacgcggcacccggcacccgcttcccccttacgagcgctcacgaccca
gacgctggcgagaacgggctccgcacctatctgctcacccgcgatgatcatggcctcttt
gcactggacgtcaagtcccgcggcgacggcaccaagttcccagagctagtcatccaaaag
gcgttggaccgcgagctgcagaaccaccacactctggtgctgacagccctggatggcggg
gagcctccacgctccgctacggtgcagatcaatgtgaaggtgatcgattccaatgacaac
agtccagtcttcgaggctccatcgtacttggtggaactgcccgagaacgctccactgggt
acggtggtcattgatctgaacgccaccgatgctgatgaaggacccaacggagaagtcctc
tactcctttagtagctatgtgcctgaccgcgtgcgggagctcttctccatcgatcctaaa
actggcctgatccgcgttaagggcaacctggactatgaggagaacggcatgttagagatc
gacgtgcaggccagagacctaggacctaacccaattccagcccattgcaaggtcacagtc
aagctcatcgaccgcaacgataacgcgccgtccattggtttcgtctccgtgcgccagggg
gcgctgagtgaggccgccccgcctggcacagtcatcgccctagttcgggtcactgaccga
gactcaggcaagaatgggcagcttcagtgtcgagttctaggtggaggagggactgggggt
ggaggtggcctgggaggtcctggttccgtccccttcaagctggaagaaaactatgacaac
ttctacaccgtggtgactgaccgtccgctggaccgtgagacacaagacgagtacaatgtg
acaatagtggcccgggacggcggctcccctccactcaactccaccaagtccttcgctgtc
aagattctggatgagaatgacaacccgcctcgtttcaccaaaggactgtacgtgctccaa
gtacatgagaacaatattccaggagaatacctcgggtcagtgctcgcccaggatcccgac
ctaggccaaaatgggacagtgtcatactccattctcccctcacacatcggtgacgtgtcc
atctacacctatgtgtccgtgaaccccactaacggggccatatatgccctgcgctccttt
aactatgaacagacgaaggcttttgaattcaaggtgctggctaaggactcgggggcgccc
gcgcatttggagagcaacgccacggtgagggtgacagtgttagacgtgaatgacaacgct
ccagtgattgtgcttcccactctacagaacgacaccgctgaactgcaggtcccgcgcaat
gctggcctggggtacctggtaagcacagttcgagccctggacagcgactttggagagagc
gggcgcctcacctatgagattgtggatggcaatgatgaccacctgtttgagatcgatccg
tccagcggcgagatccgcacgctgcaccccttctgggaggatgtgaccccggtggtggag
cttgtggtgaaggtgaccgatcatggcaagcccaccctgtccgccgtggccaaacttatc
attcgctccgtgagtggttccctgcctgaaggggtaccgcgagtgaatggtgagcagcat
cactgggacatgtcgctgcctctcatagtgacactaagcacgatttcgatcatcctccta
gcggccatgatcaccatcgctgtcaaatgtaaacgggaaaacaaggagattcgcacttac
aactgccgcatcgccgagtacagccacccacaactaggcggggggaagggcaagaagaag
aaaatcaacaaaaacgatatcatgctggtgcagagcgaggtggaagagaggaacgccatg
aacgtcatgaacgtggtgagcagtccctccctggccacctcccctatgtacttcgactac
caaacccgcctgcccctcagctcgccccggtcagaggtgatgtatcttaagccagcctcc
aacaacctgactgtcccgcaggggcacgcaggctgccacagcagcttcaccggacaaggg
accaattcgagcgagacccctgccactcggatgtccataattcagacagacaattttccc
gcagagcccaattacatgggcagcaggcagcagtttgttcaaagtagctccacgtttaaa
gacccagaaagagccagcctgagagacagtgggcacggggacagcgatcaggcggacagt
gaccaagacactaacaaaggctcctgctgtgacatgtctgttagggaggcactcaagatg
aaaactacttcaactaaaagtcaaccacttgaacaagaaccggaagagtgtattaattgc
acagatgaatgccgagtgcttggtcattctgatagatgttggatgccacagttccctgca
gccaatcaggctgaaaatgcagattaccgcacaaatctctttgtacccacagttgaagct
aacgttgagactgagacttacgaaactgtgaatcccactgggaaaaagactttttgtaca
tttggaaaagacaagcgagagcacactattctcattgccaatgtgaaaccttatttaaaa
gccaaacgtgccctgagccctctcctccaagaggtcccctcagcatctagcagcccaacc
aaggcatgcattgagccttgcgcctcaacaaaaggctccctggatggctgtgaagcaaaa
gcaggggccttagcagaagcaagcagctcctacctgcccactgacagtcagtatccgtca
cccagtaagcaaccaagagacccttccttcatggcttctgagcagatggcaagggtcttt
gcggatgtgcactccagagctagtagggattccagcgagatgggagctgtgctggaacag
ttggatcaccccaacagagatctgggcagagagtccgtggatgcggaggaagttgtgaga
gagattgataagctcttgcaggactgccggggaaatgaccctgtggctgtgagaaaaaat
aacaatggttttgaccaaacttatattaggacagaattaatgaagcttaaggagaaagga
gaaaagaaagagagagagagagagagagaagaaattggagagaagaaaaaggaggatgag
acaagttaccttttgacaatctgttag
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