Rattus norvegicus (rat): 306091
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Entry
306091 CDS
T01003
Symbol
Pcdh9
Name
(RefSeq) protocadherin-9 precursor
KO
K16498
protocadherin delta 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
306091 (Pcdh9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rno01009
]
306091 (Pcdh9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
306091 (Pcdh9)
Protein phosphatases and associated proteins [BR:
rno01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
306091 (Pcdh9)
Cell adhesion molecules [BR:
rno04515
]
Cadherins
Protocadherins
306091 (Pcdh9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Big_9
RCR
EphA2_TM
MAP17
V_ATPase_I
DUF6249
7tm_3
Motif
Other DBs
NCBI-GeneID:
306091
NCBI-ProteinID:
NP_001178617
RGD:
1306348
Ensembl:
ENSRNOG00000038068
UniProt:
A0A8I5ZK96
LinkDB
All DBs
Position
15:complement(75748472..76646644)
Genome browser
AA seq
1237 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFNREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDED
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKALHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSGQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQCNSHSKND
LIPVTHQKCPSSTGFHIRENEESHSESQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLI
SHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSD
NCWMPPGLGPYQHPKSPLSTFAPQKEWIKKDKLVNGHTLTRAWKEDTNRNQFNDRKQYGS
NEGHFSNGSHMADIPLANLKSYKQAGGTIESPKEHQL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattcc
gcaatagctcaagaacttatttacactattagagaggaattgcccgaaaatgtgcccata
ggaaatataccaaaggatctgaatatttctcacatcaacgctgccacagggacgagtgcc
agccttgtctacaggctggtttctaaagctggggatgcccctctggtgaaagtatccagt
agcactggggagattttcacaacctccaacagaatagacagagagaaactctgtgccgga
gcttcttatgctgaggagaatgagtgtttctttgaacttgaggtggtgatcctccccaat
gactttttcagactgatcaaaatcaagatcattgtcaaggataccaatgataatgccccc
atgtttccgtctcccgtcatcaatatttccatcccagagaacactttgatcaacagtcgc
tttccaatcccatcagccacagaccctgacacgggcttcaatggggtacagcattatgaa
ttgctgaatgggcagagtgtttttggactggatatcgtggaaactccggagggagaaaag
tggccgcaattgatcgttcagcagaacttggatagagaacaaaaagatacctatgtgatg
aaaatcaaagtggaggatgggggcactccacagaaatccagcacagccatactccaggtc
acagtaagtgatgtcaatgacaacaggccagtgtttaaagagggtcaagtggaagtgcat
attccagagaatgctcctgtagggacctctgtgattcagctccatgctactgatgcagac
ataggcagcaatgctgaaatccggtacatctttggtgcccaggtcgcccctgcaaccaaa
agactctttgctttaaataacacaactgggctgattacagttcagaggtccttagatagg
gaagagacagccattcacaaagtgacagtgctggctagtgacggcagctccactcctgcc
agagccaccgttaccatcaatgtcacagatgtaaatgataatcctccaaacatagacctc
aggtacattataagtcccatcaatggcaccgtgtatctctctgagaaagatccagtcaat
acaaagattgccctaattacagtttcagataaggacacggatgtgaatggcaaagtgatc
tgttttattgaaagagaggtcccatttcatctgaaggcagtgtatgacaaccagtatctg
ctagagacctcgtctctgctggactatgagggcaccaaagaattcagctttaaaatcgtt
gcctctgattctgggaagcccagtttgaatcagactgccctggtaagggttaagcttgag
gacgaaaatgacaacccaccaattttcaaccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtgggttatacttaacaactattagtgctacggatgaagacagtgggaaa
aatgcagacattgtttatcagcttggacccaatgcctccttctttgatctggacagaaag
acaggagttctgacagcctccagagtctttaacagggaggaacaagagcggttcattttt
acagtaactgccagggacaacgggacccctcccctgcagagccaagcagccgtgatagtt
actgttctggatgagaatgacaatagccccaagttcactcataatcattttcagtttttt
gtgtctgagaatctgccaaagtatagtactgtgggggtaatcacagtgacagacgaggac
gctggagagaataaagctgtgactctttccattctaaatgacaatgaaaatttcgtgttg
gatccctattcaggagtcataaagtccaatgtctcctttgatagagaacagcagagttcc
tacacgtttgatgtcaaagccactgacggaggacagccacctcggtcctctactgcaaaa
gtaactatcaatgtcatggatgtcaatgacaatagtccagttgtcatttctccaccatcc
aacacctcctttaagttggtgcccctctcagccattcctggttccgtggttgctgaagtt
tttgctgtggatattgacaccgggatgaatgcagaacttaagtataccatagtgagcggg
aacaacaaaggattatttcggattgatccagtaacgggcaatatcaccttagaagaaaag
ccggcacctactgacgtgggcctgcaccgtctcgtggtcaacataagtgacctggggtac
cctaaggctttgcacactcttgtgctggtatttctttacgtgaacgacactgctggaaac
gcctcgtatatatatgacttgatccgtaggactatggagaccccgctggacaggaacata
ggagatagtggtcaaccttatcaaaacgaggactatctcaccatcatgattgccatcgtt
gccggggccatggtcgtcatcgtcgtgatctttgtcacggtgctggtgcgctgtcgccat
gcgtcgaggttcaaggctgctcagaggagcaaacaaggtgctgaatggatgtccccaaac
caggagaataaacaaaacaagaaaaagaaacggaagaaaagaaagtcgcccaagagttct
cttttgaactttgttactatcgaagagtccaaacctgatgatgcggttcatgaacctatc
aatgggaccataagcctgcctgctgagctggaggaacagagtataggaagatttgactgg
ggcccggcccctccaacaaccttcaagcctaacagccctgacctggccaagcactacaaa
tctgcctctccacagcctgcgtttcatctcaaaccagacactccagtttccgtgaaaaag
caccacgtcattcaagagctccctttggacaacacctttgttgggggctgcgacaccctt
tccaaacgctcctccactagttcagatcacttcagtgcctcagagtgcagctcccaagga
ggcttcaagacaaagggccccttacacaccagacagtgtaactcacacagcaaaaatgac
cttattcctgtcacacatcagaaatgccccagctctaccggtttccacattcgagagaat
gaagaaagtcattctgagtctcagcgtcgtgttacctttcaccttccggatggctcccag
gaaagctgcagtgacagtggtctgggagaccacgagccggtgggtagtggaaccctgatc
tcacaccctcttcctctggttcagccacaggacgaattctacgaccaggcctctccggac
aagaggaccgaagcagacggcaactcggaccccaattctgatggacctctgggtccccga
gggttagctgaagctacagagatgtgcactcaggagtgtcttgttttgggtcactctgat
aattgctggatgccccctggcttgggtccctaccaacaccctaaatctcctctgtcaacc
tttgcaccccagaaagaatggatcaagaaagacaagctcgtgaatggccacaccctgaca
agagcttggaaagaagataccaacaggaaccagttcaatgaccgtaagcagtatggctcc
aatgaaggccatttcagcaatggcagccacatggcagacattcctctggcaaatctgaag
tcctataagcaagcaggaggcacgattgagagtcctaaggagcaccaactttaa
DBGET
integrated database retrieval system
