Rattus norvegicus (rat): 306659
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Entry
306659 CDS
T01003
Symbol
Irx1
Name
(RefSeq) iroquois-class homeodomain protein IRX-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
306659 (Irx1)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
306659 (Irx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
MRP-S32
Motif
Other DBs
NCBI-GeneID:
306659
NCBI-ProteinID:
NP_001100801
RGD:
1309060
Ensembl:
ENSRNOG00000033609
UniProt:
D4A9L1
A6JUZ0
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All DBs
Position
1:33123122..33128951
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AA seq
480 aa
AA seq
DB search
MSFPQLGYPQYLSAAGPGAYGGERPGMLAAAAAAAAAASSGRPGTAELGAGAGAAAVTSV
LGMYAAAGPYAGAPNYSAFLPYAADLSLFSQMGSQYELKDNPGVHPATFAAHTTPAYYPY
GQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
ARRRLKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESIDIDQIDERDGDQ
SNEDEEDKVEAPRARVAPPAPARDQSSPLSAAETLKSQDSPLGLAKEVSEPGSTRLLSPG
AAAVGLQGAPHSKPKIWSLAETATSPDGAPKASPPPPSSHASAHGPPSGSPLQHPAFLPS
HGLYTCHIGKFSNWTNGAFLAQGSLLNMRSFLGVSAPHAAPHGPHVTAPPPPQLPVQVAT
GVLHGEKASASSSPALPERDLVTRPDSPPQQLKSPFQPVRDNSLAPQEGTPRILAALSSA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccgcagctgggctacccgcaatacctaagcgccgcgggcccgggcgcctac
ggtggagagcgccctgggatgctggctgcggccgcggctgctgcagccgccgcctcgtcg
ggtcggccggggactgcagagctgggagcgggcgccggagcggccgcggtcacctcggtg
ctgggcatgtatgccgcggcgggaccgtacgcgggcgcacccaactacagcgcctttctg
ccctatgccgcggacctcagcctcttctcacagatgggctctcagtatgaactcaaggac
aaccccggggtacacccagctaccttcgcagcccacacaacgcctgcttattatccctat
ggccagttccaatacggggatcccggacggcccaagaacgccacgcgcgagagcacaagc
acactgaaagcctggctcaacgaacaccgcaagaatccgtaccccaccaaaggagagaag
atcatgctggccattattaccaagatgaccctcacacaggtctccacctggttcgccaac
gcgcgccggcgcctcaagaaggaaaacaaggtgacttggggggcgcgcagcaaggaccag
gaagacggcgccctctttggcagcgacaccgagggcgaccccgagaaggccgaggacgac
gaggagatcgacctggagagcattgacatcgatcagattgacgaacgtgatggcgaccag
agcaacgaagacgaggaggacaaggtggaggctcctagggcgcgcgtagcccctcccgcc
ccagctcgggaccagagctccccgttgtcggccgccgagacactcaagtcccaagattcg
cccttgggcctggctaaggaggtctcagagccgggcagcacgcgccttctgagtcccgga
gccgcggcggtcggcctgcagggcgcgcctcacagcaagcccaagatctggtcactggct
gagacagccactagccccgacggtgcgcctaaggcgtccccaccgccaccctccagccac
gccagcgcacacgggccgcccagcggctcgcccctgcaacacccggcctttctacccagc
cacggactgtacacctgccacataggcaagttttccaactggaccaacggcgcgttccta
gcacagggctcgctgttgaacatgcgatctttcctgggagtcagtgcaccgcatgcagca
cctcatggcccacacgtgaccgcaccgccacctccgcagctgcctgtccaggttgccaca
ggggtgctccatggtgagaaggcctcggcgagtagcagtcctgcgcttccagagagagac
ctagtcaccaggccggattcgcccccacagcagctaaagtcgcccttccagccggtgcgc
gacaactcgctggccccgcaggagggaacgcctcggatcctcgcagccctctcgtctgcc
tga
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