Rattus norvegicus (rat): 306819
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Entry
306819 CDS
T01003
Symbol
Kdm1b
Name
(RefSeq) lysine-specific histone demethylase 2
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
306819 (Kdm1b)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
306819 (Kdm1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Pyr_redox
Pyr_redox_2
DAO
SWIRM
Thi4
HI0933_like
Pyr_redox_3
FAD_binding_3
FAD_oxidored
Lycopene_cycl
NAD_binding_9
FAD_binding_2
2-Hacid_dh_C
GIDA
AlaDh_PNT_C
NAD_binding_7
Attractin
Tsg
YjeF_N
Shikimate_DH
rve
zf-RING_2
KARI_N
Glu_dehyd_C
Motif
Other DBs
NCBI-GeneID:
306819
NCBI-ProteinID:
NP_001100813
RGD:
1310701
Ensembl:
ENSRNOG00000016519
UniProt:
A6J705
LinkDB
All DBs
Position
17:complement(17809232..17850141)
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AA seq
824 aa
AA seq
DB search
MAASRGRSKKRSNFELSPDTLPLRSSGRQAKKKAVEITEEDEDGSSEKKYRKCEKAGCTT
AYPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYDKYTAWKRVWTSN
GKTEPSPKAFMADQQLPYWVQCTKPECRKWRQLTKEIQLTPHMARTYRCGMKPNTITKPD
TPDHCSFPEDLRVLEVSNHWWYSMLIQPPLLKDSVAAPLLSAYYPDCVGMSPSCTSTHRA
AVTATATGSASPGEMEPSKAAPASLVLGMNRYFQPFYQPNECGKALCVRPDVMELDELYE
FPEYSRDPTMYLALRNLILALWYTNCKEALTPQKCIPHVIVRGLVRIRCVQEVERILYFM
TRKGLINTGVLTVGAGQHLLPKHYHNKSVLVVGAGPAGLAAARQLHNFGMKVTVLEAKDR
IGGRVWDDKSFKGVVVGRGPQIVNGCINNPVALMCEQLGIRMHKLGERCDLIQEGGRITD
PTIDKRMDFHFNALLDVVSEWRKDKTLLQDVPLGEKIEEIYRAFVKESGIQFSELEGQVL
QFHLSNLEYACGSSLHQVSARSWDHNEFFAQFAGDHTLLTPGYSTIVEKLAEGLDIRLKS
PVQSIDYTGDEVQVTTTDGVVHSAQKVLVTVPLAMLQRGAIQFNPPLSEKKMKAINSLGA
GIIEKIALQFPYRFWDSKVQGADFFGHVPPSASQRGLFAVFYDMGPQQSVLMSVITGEAV
ASLRTMDDKQVLQQCLGVLRELFKEQEIPDPTKYFVTRWNTEPWIQMAYSFVKTFGSGEA
YDIIAEEIQGTVYFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatctcgagggcggtcaaagaagagaagcaatttcgagctttctcctgatacc
ctgcctttgaggagctccgggcgacaggcaaagaagaaggctgtagagatcacagaggag
gacgaggatggttcgtcggagaagaagtacagaaagtgtgaaaaggcaggctgtacaacg
gcgtatcctgtgtgctttgcaagcgcttctgagaggtgtgccaagaatggctacacctcc
cgatggtatcacctttcctgtggggaacacttctgcaacgaatgctttgaccactactac
agaagccacaaggatggatacgacaagtacactgcatggaagagagtgtggaccagcaac
ggcaagacggagcccagccccaaggcattcatggcagaccagcagctgccctactgggtt
cagtgcacaaaacccgagtgtagaaagtggaggcagcttaccaaggagatccagcttact
ccacacatggcgaggacgtaccgctgcggcatgaagccaaatactattaccaagcctgac
acccctgatcattgttctttccccgaggatctaagagtgctggaagtctccaaccactgg
tggtactccatgctcatccagcctccattgctgaaggacagtgtggcagccccgctgctc
tctgcctactacccggactgcgtgggcatgagcccctcctgtaccagtacacatcgtgcc
gccgtcacagccactgccaccggcagtgccagcccaggggagatggagccctccaaggca
gcccccgcttcgctcgttctaggcatgaaccggtatttccagccgttctaccagcccaac
gagtgcggcaaggccctgtgtgtgcggccagatgtgatggaactggatgagctctatgag
ttcccagagtactctcgggaccccaccatgtacctggctttgagaaacctcatcctcgct
ctgtggtatacaaactgcaaagaagctctcaccccacagaagtgcattccccatgtcatc
gtccggggccttgtacgcatccgatgtgttcaggaagtggagaggattctttatttcatg
acaaggaaaggcctcatcaacacgggagttctcaccgtgggagccggccagcatcttctt
cctaaacactaccataataaatctgttctggttgttggggctggtccagcaggcttagca
gctgctaggcaactacataactttgggatgaaggtgactgtcctggaagccaaagaccga
atcggaggccgtgtctgggatgacaagtcctttaaaggcgtggtagtaggaagaggaccc
cagattgtcaatggctgtattaataacccagtagcactgatgtgtgagcaacttggcatc
cgcatgcataagttgggagagagatgtgacttaattcaggaaggtggacggataactgac
cccactattgacaagcgcatggattttcattttaatgccctcttggatgttgtctctgag
tggaggaaggataagactctgctccaagatgtccctttaggagaaaagatagaggagatc
taccgagccttcgtgaaggagtctggcatccagttcagtgagctggagggacaggtgctg
cagttccacctgagtaacctggagtatgcgtgtggcagcagcctgcaccaggtgtctgct
cgctcctgggatcacaatgaattcttcgcccagtttgctggtgaccataccctcctaact
ccaggctactccacgatcgttgagaaactggctgaagggctagacattagactcaagtct
ccagtgcagagcatagattacactggagatgaagtgcaggtgaccacgacagatggcgtg
gtgcattccgcacaaaaggtattagtcaccgtgccattggccatgctacagagaggtgcc
atccagtttaacccaccgttgtcagagaaaaagatgaaggccatcaacagcttgggggca
ggcatcattgaaaagatcgccttgcagtttccatatagattttgggacagtaaagttcaa
ggtgctgacttttttggccacgttcctcccagtgccagccaacgagggctcttcgctgtg
ttctatgacatgggcccccagcagagtgtactgatgtcggtgatcacaggggaggcagtg
gcatccctcaggaccatggatgacaagcaggtgctgcagcagtgcctgggcgtccttcgg
gagctgttcaaggagcaggagatcccagatcccacaaagtattttgtcacacggtggaac
acagagccatggatccagatggcctatagctttgtgaagaccttcggaagtggcgaggcc
tatgacattattgctgaagaaatacaaggaactgtttactttgctggtgaggcaacaaac
aggcatttcccacaaactgttactggagcatatttgagtggtgttcgagaagcgagcaag
atcgcagccttttaa
DBGET
integrated database retrieval system
