Rattus norvegicus (rat): 307393
Help
Entry
307393 CDS
T01003
Symbol
Sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeats-containing protein 2
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
307393 (Sh3tc2)
Membrane trafficking [BR:
rno04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
307393 (Sh3tc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_2
SH3_1
TPR_12
SH3_9
TPR_8
TPR_1
TPR_2
SNAP
TPR_MalT
TPR_7
Motif
Other DBs
NCBI-GeneID:
307393
NCBI-ProteinID:
NP_001414025
RGD:
1309038
Ensembl:
ENSRNOG00000019305
LinkDB
All DBs
Position
18:57686701..57747735
Genome browser
AA seq
1288 aa
AA seq
DB search
MGGCFCIPGERSLPWGPGKEGSSKDPPGLTEDISSLENKRKCFLPQNMTQDLVLSFWVRS
RSRRCVNAALQEAARRRLWALENEAHEVHALFKDLSARLVSVQSQKDQFLITFKTLEEIW
KFSTYLNLGYVSTCLEHLFFDHTYWLNSRLVDDTEIQVSVDDTHLENIYLGLLLQEGHFF
CRAMCSVTQPADKEGEYLTLCKNELISVLSGGESDWEGMSLVTGQRGLVPVSALEPLPVS
FHQWFLKNHPGICGLPRKKDWTGSCQIGRGRCKALMDYQQEERDELGFLQGESIDVIGFV
IPGLRWFIGKSMSSGKVGFVPTRSIDLDSCSPVSKNSVFFSDEERCSLWSPGGDRKAECS
GFLSALAHTDITSVYRLSEFESIQNLQNDLSASQPEGFREARSGGTWMERKTMGSRRSSS
SLDSSLEDELISASSDSYHLPEPDDLDDPELFMDLSTSLEEDEMEHFAPILAFLDHEGYT
DHFKSLYDFSFSFLTSSFYSFSEEDELVAYLETSRKWAKMTHRTWAHARLCFLLGRLSIR
KTKLSQARVYFEEAIRVLDGAFEDLSLVAALYINLAAIYLRQRLRHKGPILLEKAGALLA
CLPDREFSAKNELDVVTYVLRQGIVAGSGPLEARSCFLAIRLLLNLGRHEEVLPFAERLQ
LLSGHSPASEVTATMLSSLYDKKYLPHLAVASVQKRGPQSARGMSVAIWQAYLVLQNATK
ILGVPFSSWCEVSALACPTLRQALAACEEQTDLNIQRTLCLLLSKMYLQHRSPDGSVQYL
SQAHVLGKLLGEEEAFESSLCLAWAYLLARQTKKALEILEPLLCSLRETECVTQRGVVHN
LLGLAFQDEGRTSRAAKSYLRALIRAREMGNIRNQAVSMANLGHLTLKSCMQQSARGYLL
QAVRLYSEIQASKETDMELVQVLLWLGQALVSGHQLVHSRLCYEMALLFGLRHRHLNSQL
QVTKSLCHFYSSVSPNPDACITYHEHWLALAQQLRDREMEGRLLESLGQLYRNLNTSRSL
RRSLACIKESLRIFVDLGERDKAAEAWLGAGRLHYLMQEDELVEVYLQEAIQTALRSEEL
SLALKLYEEAGDVFFNGTRHRHRAVEYYRAGAVPLARRMKALRTELRIFNKLTELQISLR
GYEKALEFATLAARLSVLTGDQKQELVAFHRLATVYFSLNMYEMAEDCYLKTLSLCPPWL
QSPKEALYYAKVYCRLGRLTFYQLKDAHDATEYFLLALAAAVLVGDEELQDTIKNRLDSI
CQSPLWHSKPLGCSSERSRWLSGGSLAL
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgggtggctgcttctgtatccctggggagcggagtctaccctggggcccaggtaaagaa
ggttcttccaaggatccgcctggattgactgaggacatatcctcacttgaaaacaagaga
aaatgtttcctgccacagaatatgactcaagacctggtgctctcattctgggtgaggagt
cgttccaggaggtgtgtcaacgcagccttacaggaagctgcacggaggaggctctgggcc
ctggagaatgaagcccacgaagtccatgcactgtttaaggatctctctgcaaggttggtg
agtgtccagtcccagaaggaccagttcctcatcaccttcaagaccctggaggaaatctgg
aagttttccacgtacctgaacttaggctatgtgtctacatgtctggaacacctcttcttt
gaccacacgtactggctcaacagcagactggtggacgacacagagatccaagtgtctgtg
gacgacactcacttggaaaacatatacctgggcctcctgctgcaggaaggtcacttcttc
tgcagagccatgtgctctgtgactcagccagctgacaaggaaggagaatatttgacattg
tgtaagaacgagctgatctccgtactctctgggggcgaatccgactgggaaggcatgtcc
ttagtgacgggccagaggggcctggtgccggtgtcagccctggaacccctgcctgtctct
ttccaccaatggttcctaaagaatcacccaggaatctgtggccttcccaggaagaaagac
tggacaggctcctgtcagatcggcagaggacggtgcaaggctctgatggattaccaacag
gaggaaagggacgaactgggcttcctccagggtgaaagcattgacgtcatcggctttgtc
atacctgggctgcggtggttcattgggaagtcaatgagctcaggaaaagtgggctttgtc
cccaccaggagcatagatctcgattcctgctccccggtgagcaagaactctgtctttttc
agtgatgaggaaaggtgttctctctggtccccaggaggtgacaggaaggctgagtgctct
ggcttcctaagcgcactcgctcatactgacatcacctctgtctaccggctgagtgagttt
gaatccatccagaatcttcagaatgacttgagcgcatctcagcccgagggcttcagggag
gccaggtctggtgggacctggatggagcggaagaccatgggctccagacgttccagcagt
tctctagactccagccttgaggatgagctcatctcagcctcctcagacagctatcacctt
ccagagcctgatgacctcgatgacccggaactgttcatggacctaagcactagcctggaa
gaggatgagatggagcactttgcccccatcttggcttttctagatcatgaaggctacact
gaccacttcaagagcctctatgatttctccttctcttttcttacttcgtccttttacagc
ttctctgaggaggatgagctagtggcctacctagagacttcaaggaagtgggccaagatg
acccacaggacgtgggcccatgcccggctctgcttcctcctgggcagactaagcatcagg
aagaccaaactttcccaggccagggtatactttgaggaggccattcgagtccttgacggg
gcgttcgaggacctctccctggtggctgctctgtacatcaacttggcagccatctacctg
aggcagaggctaagacataaagggccaatcctgctggaaaaggcaggtgctctgctggcc
tgcctgccagaccgtgagttcagtgccaagaatgagcttgacgtggtgacttatgtgctt
cgccaagggatcgtggcggggagtggccctctggaggctaggtcctgcttcctggccatc
cggttgctcctgaatcttggccggcatgaggaagttctgccatttgcagagcgtctgcag
ctcctttctggacactctcctgcttcggaggttacagccaccatgttgagttctctgtat
gacaagaaatatcttccacatcttgcagtggcctccgttcagaaacgtggtccccagagt
gcccgggggatgtctgttgccatttggcaggcttatttggttctccagaatgccacaaag
atcctgggtgttcctttttcaagctggtgtgaagtttctgcactggcctgcccaaccctc
aggcaggccctggctgcctgtgaggaacagactgacctgaacatccagaggaccttgtgt
ctcctcctgtccaaaatgtacctccagcacaggtctcctgatggttctgtccaatacctg
agtcaagcacatgtgttagggaaactcctgggtgaagaggaagcctttgaatcttctctc
tgtctggcatgggcttatctcttagccaggcagacgaagaaggctttggagatcctcgaa
ccgctactgtgttccttgagggagacagagtgtgtgacccagaggggagtggtccataac
ctcctgggactggcctttcaagatgaaggtcggacaagcagggcagccaagagctatctc
cgagctttgatcagagctcgggagatggggaatatacgtaaccaggctgtgtctatggcc
aatcttggtcacttgaccctcaagtcctgtatgcagcagtcagccaggggttatctcctg
caggctgtccgactgtattctgaaatccaagccagcaaggagacagatatggaattggta
caagtgttactctggttgggccaagctctggtgtctggacaccagctggtccacagccgc
ctttgttatgaaatggcactgctatttggcttaaggcaccgacacctaaacagtcaactt
caggtcaccaaatccctctgccatttctacagctccgtgtccccaaaccctgacgcgtgc
attacctatcatgaacactggctggccttggctcaacaactcagggaccgggagatggag
gggcggttactggagtcccttgggcagctttataggaacctaaatacatccaggtccctc
agaaggtccctcgcctgcatcaaggagagcctgcggatattcgtcgacctaggggagaga
gacaaggctgctgaggcctggctgggggccgggcgcctgcactacctcatgcaggaagac
gagctggtggaagtgtatttgcaggaggccatccagacagccttgaggtcagaagagctc
tccctcgctctcaagctttatgaagaagcaggtgatgtgttcttcaatgggacccgccat
agacatcgggctgtggagtattaccgggctggggctgttcctttagcgaggagaatgaag
gccctgcgaaccgagctgcggatcttcaacaagctgacggagctgcagatcagcctccgg
ggctatgaaaaagctttggaatttgccactctggctgccaggctgagtgtcctcacagga
gatcagaaacaggagctggtggcttttcaccgcctggcgaccgtgtacttctctctgaac
atgtatgagatggctgaagactgctacctgaagactctatccctgtgcccgccatggctg
cagagtcccaaggaagcgctgtactatgccaaggtgtattgtcgcctgggccgactcact
ttctaccagctgaaggatgcccatgatgctactgaatactttttgctggcactagcagct
gcggtcctggtgggtgacgaggagctgcaggacaccattaagaacaggctagacagcatc
tgccagagtcccttgtggcacagcaaacccttggggtgctcttcagagaggtcacggtgg
ctcagtggtgggagcctggccctctga
DBGET
integrated database retrieval system