Rattus norvegicus (rat): 307410
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Entry
307410 CDS
T01003
Symbol
Rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
307410 (Rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rno03041
]
307410 (Rbm22)
Spliceosome [BR:
rno03041
]
Complex B
Other components
Prp19-related factors
307410 (Rbm22)
Complex C
307410 (Rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
RRM_occluded
Nup35_RRM_2
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_3
zf-CCCH_10
zf-CCCH_12
RRM_PARP14_3
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
307410
NCBI-ProteinID:
NP_001020847
RGD:
1305770
Ensembl:
ENSRNOG00000019235
UniProt:
Q4V7D7
LinkDB
All DBs
Position
18:56283807..56294615
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AA seq
420 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQN
MEREISNSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLG
DTITETDLRNHFYQFGEIRTVTVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAV
VNIALPPPPGIAPPPPPGFGPHLFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttctctgggttccaacacttacaacaggcagaactgggaggacgcggacttc
cccattctgtgtcagacgtgtcttggagaaaacccttatatacgaatgaccaaagaaaaa
tatggaaaagaatgcaaaatctgtgccaggccattcacagtatttcgatggtgccctggg
gtccgcatgcgcttcaagaagactgaagtgtgccagacctgcagtaaattgaagaatgtt
tgtcagacctgcctgttagacctagagtacggcctacccatccaggtccgtgatgcaggg
ttatcatttaaagatgacatgcctaaatcagatgtcaataaagaatattacacccaaaat
atggaaagagaaatttctaactctgatggaacacggccagtcggaatgctgggaaaagca
acatccactagtgacatgctactcaaattggcccggaccacaccttactacaaaaggaat
cggccccacatttgttccttctgggtgaaaggagagtgtaagaggggagaggagtgtccc
tacagacatgagaagcctaccgatccagatgaccctcttgctgatcagaatataaaagac
cggtactatggaattaacgaccctgtggctgataagcttctcaagcgggcttcaaccatg
cctcgtcttgacccaccggaggataagacgatcaccacactgtatgtgggtggtctggga
gacaccatcactgaaacagacctcaggaatcatttctaccagttcggagagattcgcaca
gtcactgttgtgcagaggcagcagtgtgccttcatccagttcgccaccaggcaagctgcc
gaggtggctgccgagaagtctttcaacaagctgattgtgaacggccgacgactcaatgtc
aaatggggacgatcccaagcagccagaggaaaagaaaaagagaaggatggaactacagac
tctgggatcaagttagaacctgtaccaggactgcctggagctctgcctccacctcctgcc
gcagaagaggaagcgtctgccaactacttcaacctgcccccaagtgggcctccagccgta
gtgaacattgccctgcccccaccccctgggatcgccccacccccacccccaggttttgga
ccacacttgttccacccaatgggaccgccccctcctttcatgagagctccaggaccaatc
cactacccgtctcaggaccctcagagaatgggagctcatgctggaaagcacagcagcccc
tag
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integrated database retrieval system