Rattus norvegicus (rat): 307481 Help Entry 307481            CDS       T01003                                  Symbol Pcdh1 Name (RefSeq) protocadherin-1 precursor   KO K16498   protocadherin delta 1 Organism rno  Rattus norvegicus (rat) Pathway rno03273   Virion - Lassa virus and SFTS virus Brite KEGG Orthology (KO) [BR:rno00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03273 Virion - Lassa virus and SFTS virus     307481 (Pcdh1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:rno01009]     307481 (Pcdh1)   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:rno04515]     307481 (Pcdh1) Protein phosphatases and associated proteins [BR:rno01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      307481 (Pcdh1) Cell adhesion molecules [BR:rno04515]  Cadherins   Protocadherins    307481 (Pcdh1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Protocadherin Cadherin_2 Cadherin_CELSR2_9th Motif Other DBs NCBI-GeneID:  307481 NCBI-ProteinID:  NP_001094159 RGD:  1308490 Ensembl:  ENSRNOG00000060410 UniProt:  A0A8I6AAW9 LinkDB All DBs Position 18:complement(30258154..30290828) Genome browser AA seq 1216 aa AA seqDB search MGPLRPSPGPGGQRLLLPPLLLALLLLLAPSASHTTQVVYKVPEEQPPNTLIGSLAADYG LPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLRECQNQISGSPCILEFEVSITD LVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLATDRDAGPNGV ASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGSPPRAS SALLRVTVLDTNDNAPKFERPTYEAELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQA PEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGANPKSARAQVVVTVKDMND NAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQL RQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLRVQVVDVNDN APVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENG EVRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVM ENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGDFVIQNGTGTILSSLSFDREQQSTYT FQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSNTSHRLLTPQTRLGETVSQVTAE DIDSGINAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPR YGTALVHLYVNETLANRTLLETLLVHSLDTPLDIDIAGDPEYERSKQRGNILFGVVAGVV AVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPKPSGKAAKGSKSKGKKSKSPKPV KPVEDEDDTGLQKSLKFNLMSDAPGDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQP QSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSDYSYRTNPPKYPSKQLPHRRVTFS ATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRLGPLALPEDHYERTTPDGSIGEME HPENDLRPLPDVAMTGTCTRECSEFGHSDTCWMPGQSSPSRRTKSSALKLSTFVPYQDRG GQEPAGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHDSCKDSATLEEIPLTQTSDFPPT ATPASAQTSAKREIYL NT seq 3651 nt NT seq  +upstreamnt  +downstreamnt atggggcctctgaggcccagcccagggcctggggggcagcggttgctgctgcccccctta ctgctggcactgctgctcctattggctccatctgccagccataccacccaggtagtatac aaggtgccagaggaacagccgcccaacacactcattgggagccttgccgctgactacggt ttgccagacgtgggtcatctgtacaaactagaggtaggtgctccatatcttcgagtggat ggcaagactggagacattttcaccacagagacctccattgatcgagaggggcttcgtgaa tgccagaaccagatctccgggagtccctgtatcctggagtttgaggtgtcaatcacggac cttgtgcagaacggcagcccccgactgctagagggccagatagaggtgcaagacatcaat gacaacacgccgaactttgcctcaccagtcatcaccctggctatcccggagaacaccaac atcggctcactcttccccatcccactggccacagaccgtgacgctggccccaatggcgta gcatcctatgagctgcaggctgggcctgaggcccaggagctatttggactgcaggtggct gaggaccaggaggagaagcagccacagctcattgtcatgggcaacctggaccgcgaacgg tgggactcctacgacctcaccatcaaggtacaggatggtggcagtcctccacgtgccagc agcgccctgcttcgtgtcactgtgcttgatacaaatgacaacgctcccaagtttgaacgg ccaacctacgaagccgagctgtctgagaacagtcccattggccactcggtcatccaggtg aaagctaatgactcggaccaaggtgccaatgcggagattgactacacgttccaccaggca cccgaggttgtcaggcgtcttttgcgactagacagaaacactggacttatcaccgtccag ggccctgtggatcgtgaggatctaagcactctgcgtttctcagtgctcgccaaggaccga ggtgccaaccccaagagtgcccgtgcccaggtagttgtgactgtgaaagacatgaatgac aatgccccgaccattgagatccgaggcatagggctggtgactcatcaagatgggatggct aacatatcagaggatgtggcagaggagaccgcggtggccttggtacaggtgtctgatcga gatgagggagagaatgcagctgtcacctgtgtagtagcaggtgatgtgcccttccagcta cgccaggccagcgagacaggcagcgacagcaagaaaaagtatttcctgcagaccaccacc cctctcgactatgagaaagtcaaagactacaccattgagatcgtggcggtggactccggc aaccctccgctctctagcaccaactccctcagggtgcaggtggtagacgtcaatgacaat gcccccgtcttcacccagagcatcactgaagttgccttcccagaaaacaacaagcctggt gaagtggtagccgaggtcacggccagcgacgccgactctggctctaacgcagagctggtg tattctctggaacctgagccagctgcccaggggctgttcactatctcacccgagaacgga gaggtcagggtaaagacatcgctggatcgggaacagagagacagctatgagctgaaggtg gtggcagccgacaggggcagtcccagccttcagggcacagccacggtccttgtcaacgtg cttgactgtaatgacaatgaccccaaatttatgctgagtggctacaacttctcagtgatg gagaacatgccagcgctgagtccagtgggtatggtgactgtcatcgacggagacaagggg gagaatgcccgggtgcagctctcagtcgagcaggacaatggtgactttgttatccagaat ggcacaggcaccatcttatccagtttgagctttgatcgggaacaacagagtacctacacc ttccaactgaaggccgtggatggtggtgtcccacctcgttcggcgtacgtcggtgtcacc atcaatgtgttggatgagaatgacaatgcgccctttatcaccgccccctccaacacgtct caccggctgctgaccccgcagacacgtctcggcgagacagtcagccaggtgacagcggag gacattgactctggtatcaatgccgagctgacctatagcatcgctggcggcaacccttac ggactcttccagattggatcacattcaggtgccatcacgctggagaaggagattgaacgg cgccaccacgggttacaccgccttgtggtgaaggtcagcgaccgtggcaagccccctcgc tatggtacagccttggtccacctttacgtcaacgagaccttagccaaccgcacgctgcta gagaccctccttgtccatagcctggacacgcccctggatattgacattgccggggatcca gaatatgagcgttccaagcaacgtggcaacattctctttggtgttgtagccggcgtggtg gccgtcgccttactcatcgccctggcagtactcgtgcgctactgccggcagcgggaggcc aagagtggctaccaggcgggtaagaaggagactaaggacctatacgcccccaagcctagc ggcaaagctgctaagggaagcaagagcaaggggaagaaaagcaagtcgccgaaacctgtg aagcccgtggaggatgaggatgacactgggctacaaaagtctctcaagttcaaccttatg agtgatgcccccggggacagtccccgaatccacctacccctcaactacccgcccggcagc cccgacttaggccgccattaccgctccaattccccactgccttccatccagctgcaaccc cagtcaccctcggcctccaagaagcaccaggtggtgcaggacctgccgcccgcaaacaca tttgtgggcactggggacaccacgtccacgggctccgagcagtactccgactacagctat cgcaccaacccccccaaataccccagcaagcagttacctcaccgccgtgtcaccttctcg gccaccagtcaggcccaggagctgcaggatccatcacagcacagttattatgacagtggc ctggaagagtctgaaacgccatctagcaagtcatcctcaggcccccgacttggtcccctg gccctcccggaggaccactatgagcgcaccacccctgacggcagcataggtgaaatggaa caccctgagaacgacctccgccctttgcccgacgtcgccatgacgggcacatgtacccgg gagtgcagcgagtttggtcactctgacacatgctggatgcctggccagtcgtctcccagc cgccggaccaagagcagcgccctcaaactctccaccttcgtgccttaccaggaccgagga gggcaggagcctgcgggcgccggaagccccagccccccggaagaccggaacaccaaaacg gcccccgtgcgcctcctgccctcctacagtgccttctcccacagtagccatgactcctgc aaggactcggccaccttggaggaaattcccttgacccagacctcggacttcccacccaca gccacaccggcatctgcccagacatccgccaagcgtgagatctacctgtga

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