Rattus norvegicus (rat): 307618
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Entry
307618 CDS
T01003
Symbol
Cdh5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04514
Cell adhesion molecules
rno04520
Adherens junction
rno04670
Leukocyte transendothelial migration
rno05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
307618 (Cdh5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
307618 (Cdh5)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
307618 (Cdh5)
09160 Human Diseases
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
307618 (Cdh5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
307618 (Cdh5)
04090 CD molecules [BR:
rno04090
]
307618 (Cdh5)
Cell adhesion molecules [BR:
rno04515
]
Cadherins
Major cadherins
307618 (Cdh5)
CD molecules [BR:
rno04090
]
Proteins
307618 (Cdh5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_2
Stevor
Motif
Other DBs
NCBI-GeneID:
307618
NCBI-ProteinID:
NP_001100877
RGD:
1307370
Ensembl:
ENSRNOG00000013324
UniProt:
A6JXX3
LinkDB
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Position
19:complement(821875..860931)
Genome browser
AA seq
776 aa
AA seq
DB search
MQRLTELATALGTFLGLLAVAAMAGPNMLPVHQRQKRDWIWNQMHIDEEKNESLPHYVGK
IKSNVNRQNAKYVLQGEQAGKIFRVDADTGDVLAYERLDREKVSEYFLTALIVDKKTNKN
LEQPSSFTVKVHDVNDNWPVFTHQVFNASVPEMSAIGTSVIRVTATDADDPTVAGHATVL
YQMVKGNEYFAIDNSGLIFTKDKNLDRETRAEYKIVVEAQDAQGLRGESGTATVLIRLED
INDNFPIFTQSTYTFSVPEDIRVGKPLGSLSVEDPDEPQNRMTKYSIMQGEYRDTFTIET
DPDRNEGIIKPTKPLDYELIQQYTFHIEATDPTIRLGYLSSTAGKNKAKIIINVLDVDEP
PVFQRRFYHFHLPENKKKPLIGTVVAKDPDKAQRSIGYSIRKTSDRGQYFRITKQGNIYN
EKELDRETHAWYNLTVEANELDSRGNPVGKESIVQIYIEVLDENDNAPEFAQPYEPKVCE
NAAQGKLVVQISATDKDVVPVNTKFKFALKNEDSNFTLINNHDNTANITVKYGQFNREHT
KFHYLPVLISDNGMPSLTGTGTLTVAVCKCNEQGEFTFCEEMAAQAGVSIQALVAIFLCI
LTITVITLLIFLRRRLRKQAHAHSKSALEIHEQLVTYDEEGGGEMDTTSYDVSVLNSVRT
GSNKPLRSTMDARPAVYTQVQKPPRLAPSLHGGPREMATMIEVKKEEADNDGGGPPYDTL
HIYGYEGTESIAESLSSLSTNSSDSDIDYDFLNDWGPRFKMLAELYGSDPQEELII
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggctcacagagctggccactgctttgggcaccttcttgggcctgctggcagtg
gcagcgatggcaggccccaacatgctgcctgtccaccagcgccaaaagagagactggatt
tggaatcaaatgcacatagatgaagagaaaaatgagtcgctgccccactatgtgggaaag
atcaagtccaatgtgaaccgtcagaatgctaagtatgtgctccaaggagaacaagctggc
aagatcttcagggtcgatgctgacacaggggatgtgcttgcctatgagaggttagaccgg
gaaaaagtctctgagtacttccttactgccctcattgtggacaagaagaccaacaaaaac
ctggaacaaccttccagcttcactgtcaaggtgcatgatgtaaatgacaactggcctgtg
tttacgcaccaggtattcaacgcatctgtgcccgagatgtcagctatagggacctctgtc
atccgtgtgacagcaacggatgcagatgaccctacggtggctggccacgccactgtcttg
taccaaatggtgaaaggaaatgagtacttcgccatcgacaattctggactcattttcaca
aaggacaaaaacttggacagagagacacgggctgaatacaagatcgtggtggaagcacaa
gatgcccagggtctgcggggagagtcaggcacagccactgtgctgatcagattggaagac
atcaatgacaacttccccatctttactcagtccacatacacattttcggtgcctgaagat
atccgtgtgggcaagcccttgggctctctctctgttgaggacccagatgagcctcagaac
cggatgaccaaatatagcatcatgcagggcgagtacagggacaccttcaccattgagaca
gaccccgaccgtaatgagggtatcatcaaacccacaaagcccctggactatgaactcatc
cagcagtacacgttccacatcgaggccacagaccccactatcagactcggatacctgagc
agcactgcgggcaaaaacaaagccaagatcatcatcaatgtcctagatgtggatgagccc
cctgtcttccagcgacgcttctaccacttccacctgcccgaaaacaagaagaaaccactg
attggcactgtggtggccaaagaccccgacaaggctcaacgcagcataggatactccatc
cgcaagaccagtgacagaggccaatacttccgaataaccaaacaagggaacatctataat
gagaaagaactggacagagaaacccacgcctggtataacctgactgtggaggccaacgaa
ttggattctaggggtaaccctgtaggtaaagaatccattgtacagatttacattgaagtt
ttggatgagaatgacaacgccccagaatttgcccagccctacgaacctaaagtatgtgag
aatgctgcccagggcaagctggtagtacagatctctgcaacagacaaggacgtggtgcca
gtaaacacaaagttcaagtttgccctgaagaacgaggacagcaacttcaccctcatcaac
aaccacgacaataccgccaacatcacagtcaagtatggacagtttaatcgggagcatacc
aagttccactacctgcctgtgctcatctccgacaatgggatgcccagcctgactggaacc
ggcacgctaacagtggctgtgtgcaaatgcaacgaacagggcgagttcaccttctgtgag
gagatggccgcacaggcgggtgtcagcatccaggcactggtagccatctttctgtgcatc
ctcaccatcacagtgatcaccttgctgatcttcctgcggaggcggctccggaagcaggcg
catgctcatagcaagagtgcgcttgagattcatgagcagttggtcacctacgacgaggag
ggcggtggcgagatggacaccacaagctacgacgtgtctgtgcttaattctgtgcgcacc
ggctccaacaagcctctgcggtccacgatggatgcccggccagcagtatacacacaggtg
cagaagcctccacgactggcgcctagcctgcacggagggcccagagagatggccaccatg
atcgaggtgaagaaagaagaggcagacaatgatggcggtggtcccccctacgatacactg
cacatctacggctacgagggcacagagtccatcgcagagtccctcagctccctgagcacc
aattcctccgactctgacatcgactatgacttcctcaatgactggggacccaggttcaag
atgctggcagagctgtatggctcagatcctcaggaagagctcatcatctag
DBGET
integrated database retrieval system
