Rattus norvegicus (rat): 307715
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Entry
307715 CDS
T01003
Symbol
Irx6
Name
(RefSeq) iroquois-class homeodomain protein IRX-6
KO
K24889
iroquois-class homeodomain protein IRX
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
307715 (Irx6)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
307715 (Irx6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Prothymosin
MRP-S32
Motif
Other DBs
NCBI-GeneID:
307715
NCBI-ProteinID:
NP_001095883
RGD:
1564830
Ensembl:
ENSRNOG00000011037
UniProt:
D4A7R4
A6KD59
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All DBs
Position
19:complement(30503416..30509396)
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AA seq
443 aa
AA seq
DB search
MAFPPFGHPYGGASQFLVSASSSATCCETAPRSVSDVASASTSASTLCCAPYDSRLLGSA
RPELGAALGIYGAPYAAAQSYPGYLTYGPEPPTLCGALNPQYEFKDAAGSFTPSLTQPGA
YYPYETTLGQYQYDRYGGVELSSAGRRKNATRESTSALKAWLHEHRKNPYPTKGEKIMLA
IITKMTLTQVSTWFANARRRLKKENKMTWVPKNKGGEERKADGGGEDALGCLNGDTKDAT
ASQEAQGLQLSDLEDLEEEEEEEEEEEAEKEEAAVSAARRLVGFPKSAQPLPAPCAAAQE
GCLESTECGLAVPRFSFTEAPQSGEADFITAEPSGPTMIVHYPSGHKPRIWSLAHTAASS
AVKGAPSTPPRGQSPECHMIPRQPSSVRRLLVPRFSGGEENSPAVKAFGNSTFALQGLPL
NCAPCPRRREPEVRFQYPSGAEG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggccttcccgccctttggacacccgtatggcggcgcatcccagtttctggtgtctgca
agttccagtgccacttgctgtgaaacggcccctcggtcagtgtcagatgtggcctcagcc
tccacctctgcctctactctttgctgtgcaccctatgacagtcggctgctgggcagtgct
cggccagagctgggcgctgccttgggcatctatggagcaccttatgcagctgcccagagt
tacccagggtacctgacctatggcccagagccacctacactgtgtggtgcactgaatcct
cagtatgagtttaaggatgctgcaggaagctttactcccagtctgacccagccaggggcc
tactacccctatgagacaactctggggcagtatcaatatgacaggtatggtggagtggag
ttgagcagcgctggccgcaggaagaatgccacaagagagagcaccagcgcactgaaggcc
tggctccacgaacaccgcaagaacccgtaccccactaagggcgagaagatcatgctggcc
atcatcaccaagatgaccctcacccaggtgtccacctggttcgccaacgcgcgccggcgc
ctcaagaaggaaaacaaaatgacgtgggtgcccaagaacaagggtggggaggagaggaaa
gcagatggtggaggagaagacgctctggggtgcctgaatggtgacaccaaagacgctact
gccagccaagaggcccaggggctgcagctgagtgacttggaagatctggaggaagaggag
gaagaggaggaagaggaagaagcagaaaaagaggaggcagcggtctcagcagcacggagg
ctggttggttttccgaagagcgcacagcccttgcctgctccctgtgctgccgctcaggag
ggctgcttggagagcacagagtgcggcttggctgtgccccgcttctcctttactgaagcc
ccacaatcaggggaagctgactttattacagcagagccaagtggccccacgatgatcgtg
cactacccaagcggccacaaaccccgcatttggtccttagctcacactgcagcatccagc
gctgtcaaaggtgctccctcaactccgcccaggggacaaagtccagagtgccacatgatt
cccagacagcccagttctgtcaggcgactcctggtccccagattctcgggaggcgaagaa
aattctcctgcagtcaaagctttcggaaactccacgttcgctctgcaggggctgccactg
aactgtgcaccatgcccgaggcggagagagcctgaagtgcgcttccagtacccatctgga
gcagaaggttag
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