Rattus norvegicus (rat): 307721
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Entry
307721 CDS
T01003
Symbol
Irx3
Name
(RefSeq) iroquois-class homeodomain protein IRX-3
KO
K24889
iroquois-class homeodomain protein IRX
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
307721 (Irx3)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
307721 (Irx3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
BUD22
MRP-S32
Motif
Other DBs
NCBI-GeneID:
307721
NCBI-ProteinID:
NP_001382062
RGD:
1307424
Ensembl:
ENSRNOG00000011533
UniProt:
A6KD68
LinkDB
All DBs
Position
19:31384803..31388241
Genome browser
AA seq
507 aa
AA seq
DB search
MSFPQLGYQYIRPLYPPERPPAAGGGGGGSSAGGRSGPGAGASELAASGSLSNVLSSVYG
APYAAAAAAAAAAQGYGAFLPYATELPIFPQLGAQYELKDSPGVQHPATAAAFPHPHPAF
YPYGQYQFGDPSRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTW
FANARRRLKKENKMTWAPRSRTDEEGNAYGSEREEEDEEEDEEEGKRELEMEEEELAGEE
EDTGGEGLADDDEDEEIDLENLDSAAAGSELTLAGTAHRNGDFGLGPISDCKNSDSDDSS
ESLEERPLSVLSLAPAPPPVARAPASPPSPPSGLDPCAPAPAPSSTLQKPKIWSLAETAT
SPDNPRRSPPGAGGSPPGAAVAPPTLQLSPAAAAAAAAAHRLVSAPLGKFPAWTNRPFPG
PPAGPRPHPLSMLGSAPQHLLGLPGAAGHPAAAAAAYARPAEPESGTDRCSALEVEKKLL
KTAFQPVPRRPQNHLDAALVLSALSSS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccccagctcggataccagtacatccgcccgctctacccacccgagcgcccg
ccagccgcgggcggcggcggaggtggcagtagcgctgggggccggagcggtccgggtgcc
ggagcctccgagttggccgcctcggggtccctatccaatgtgctttcgtccgtgtacggg
gcaccctacgccgcggccgcagcagccgccgccgccgcccaggggtacggcgccttcctg
ccctacgccacggagctgcccatcttcccacagctgggcgctcagtatgagctgaaggac
agccctggggtccagcatccggccacggccgccgcgttcccgcacccgcaccccgccttc
tacccctacggccagtaccagttcggggacccgtcccgtcccaagaacgccacccgggaa
agcacaagcacgcttaaggcctggctcaatgaacaccgcaagaacccgtaccccaccaag
ggcgagaagatcatgttggccatcatcaccaaaatgaccctcacccaggtgtccacctgg
ttcgccaacgcgcgccggcgcctcaagaaggaaaacaagatgacgtgggctccccgtagt
cgcacggacgaggagggcaatgcttatgggagcgagcgggaggaggaggacgaagaggaa
gacgaggaagagggcaaacgcgagctggagatggaggaggaggagctcgcaggagaggag
gaggacacggggggcgagggcctggccgacgacgacgaggatgaggagatcgatttggaa
aacttagacagcgcggcagccgggtcggaactaaccctggctgggacggcgcataggaac
ggagacttcggcctaggacccatttcagactgcaaaaatagcgactcggacgacagctcc
gaaagcttggaggagcgaccactgtccgtcctgagcttggctcccgcgccaccgcccgtg
gccagggctcctgcgtctccaccttctccaccctccggcctggacccctgcgctccggca
ccggcgccctcctccaccctccagaagcccaagatctggtcactggccgagacggccact
agcccggacaacccacgtcgatcgcctcccggagccggaggttctcctcccggggcagcc
gttgcgcccccgacgctgcagctctcgcccgcggccgccgcagcggctgctgcagcacac
agactggtgtcggcgccgcttggcaaattccccgcttggaccaacaggcctttcccaggc
ccgccggccggtccgcggccgcacccgctgtccatgctaggctcggccccacagcacctg
ctgggacttcccggagccgcaggccaccccgctgcggccgccgccgcctatgctcggcct
gcggagccagagagtggaacagatcgctgtagtgccttggaagtggagaaaaagttactt
aagacagctttccagccggtgccaaggcggccccagaaccacctggatgctgctctggtc
ttatcagctctctcttcgtcttaa
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integrated database retrieval system
