Rattus norvegicus (rat): 307766
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Entry
307766 CDS
T01003
Symbol
Smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
307766 (Smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rno03021
]
307766 (Smarca5)
03036 Chromosome and associated proteins [BR:
rno03036
]
307766 (Smarca5)
Transcription machinery [BR:
rno03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
307766 (Smarca5)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
307766 (Smarca5)
RSF complex
307766 (Smarca5)
WICH complex
307766 (Smarca5)
B-WICH complex
307766 (Smarca5)
NORC complex
307766 (Smarca5)
BRF complex
307766 (Smarca5)
NuRF complex (fruit fly)
307766 (Smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
307766
NCBI-ProteinID:
NP_001100889
RGD:
1308832
Ensembl:
ENSRNOG00000018149
UniProt:
A6IYH1
LinkDB
All DBs
Position
19:44172465..44208967
Genome browser
AA seq
995 aa
AA seq
DB search
MEEVFDDGSPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSP
LKMKPGRPRVKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKW
GKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVP
KSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVF
KKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPD
VFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLS
KMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMH
LVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE
RQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIG
QTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHG
ATHVFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGE
DYREKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFF
PPRLFELLEKEILYYRKTIGYKVPRSPDLPNAAQAQKEEQLKIDEAGPLNDEELEEKEKL
LTQGFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDI
EKIMAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLIC
MLHKLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEE
KEKAEKKKRGPKPSTQKRKMDGAPDGRGRKKKLKL
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagtatttgatgatggatcacctggaaagcaaaaagaaatccaagaacctgat
cctacatatgaagaaaaaatgcaaactgaccgagcaaatagatttgagtatttattaaag
cagacagagctgttcgcacatttcattcagcctgctgctcagaagactccaacctcaccc
ttgaagatgaaaccagggcgcccacgggtaaaaaaggatgaaaaacagaatttgctttcg
gttggagactaccgacatcgtagaacagagcaagaggaggatgaagagctattaacagaa
agttccaaagcaaccaatgtttgtactcgatttgaagattctccatcatatgtaaaatgg
ggtaaactgagagattatcaggtccgaggattgaattggctcatctctctgtatgagaat
ggcatcaatggtatccttgcagatgagatgggtttgggaaagactctgcaaacaatttct
cttcttgggtacatgaaacactatagaaatattcctggtcctcatatggttttggttccc
aagtctacattgcacaactggatgagtgaattcaagagatgggtgccaacacttaggtct
gtttgcttgataggagataaagagcaaagagctgcatttgtcagggatgttctattacca
ggagagtgggatgtatgtgtcacatcttatgaaatgcttattaaagagaagtctgtgttc
aaaaaatttaactggagatacttagttatagatgaagctcacaggataaaaaatgaaaaa
tctaagttgtcagaaatagtgagagaattcaagactacaaaccgactgttgctgacaggg
acgcctcttcagaacaacctgcacgagctctggtccctgctaaactttttgttaccagat
gtgtttaattcagctgatgactttgattcctggtttgatacaaataattgccttggggat
caaaaactagttgagaggcttcatatggttttgcgtccattccttcttcgtcgaattaaa
gctgatgttgaaaagagtttgcctccaaagaaagaagtaaaaatctatgtgggtcttagc
aaaatgcaaagggaatggtatactcggatattaatgaaagacatagacatactgaactca
gcagggaagatggacaagatgagactgttgaacatcttgatgcagctgaggaagtgctgt
aaccacccttatctctttgacggggctgagcctgggcctccctacaccacagatatgcat
ctggttaccaacagcggcaagatggtggtgttggacaaactgctccctaaattaaaagaa
caaggttcaagagtactaatctttagtcagatgacaagggtattagacattttggaagat
tattgcatgtggagaaattatgagtactgcaggttggatggacagacaccccatgatgag
agacaagactccattaatgcatacaatgaaccaaatagcaccaagtttgtatttatgcta
agcacacgtgctggtggtctgggcatcaaccttgcaactgctgatgtagtaattttatat
gattcagattggaatcctcaagttgatcttcaggctatggaccgagcacatagaattgga
caaacgaagactgttcgagtgttccgctttataactgataacactgtggaagaaagaata
gtagaacgtgccgagatgaagctcagactggattccatcgtaattcaacaagggaggctt
gtagatcagaacctgaacaaaattgggaaagatgaaatgcttcaaatgattcgacatggt
gccacacatgtgtttgcttcaaaagaaagtgaaatcactgatgaggatattgatggtatt
ttggaaagaggtgcaaagaagactgcagaaatgaatgaaaagctctccaagatgggtgaa
agctcacttagaaactttacgatggatacagagtccagtgtttataactttgaaggagaa
gactatagagaaaaacaaaagattgcattcacagagtggattgaaccacctaagagagaa
agaaaagccaactatgctgtagatgcgtacttcagggaagctctgcgtgtcagtgagcct
aaagcacccaaggcgcctcgacctccaaaacaaccaaatgttcaggatttccagttcttt
cctccacgtttatttgaattactggaaaaagaaattctatattacaggaaaactatcggt
tacaaggtacctcggagtcctgatctacccaatgcagcacaggcacagaaggaagagcag
cttaaaatcgacgaagcagggccccttaatgacgaggagttagaggaaaaagagaagctt
ctgactcaggggttcactaattggaataagagagattttaaccagtttatcaaggctaat
gaaaagtggggtcgcgatgatattgagaacatagccagagaagtagaagggaaaactcca
gaagaagtcattgagtactcagctgtgttctgggaaagatgcaatgagctccaggacata
gagaagattatggctcagattgaaaggggagaggcaaggattcaaagaagaataagtatc
aagaaagcactagatacaaagattggacggtacaaagcaccctttcaccaactaagaata
tcgtatggtactaacaaagggaaaaactacacggaagaagaggaccgctttctcatttgt
atgcttcacaagcttggcttcgacaaggaaaatgtttatgatgagttacgacaatgcatc
cgaaactcccctcagttcagatttgattggtttctcaagtccagaactgcgatggagctc
cagaggaggtgtaataccttaattactttgattgaaagggaaaatatggaactagaagaa
aaggagaaggcagagaaaaagaaaagaggaccaaagccttccacacagaaacgtaagatg
gatggtgcccctgatggccgaggaagaaaaaagaagctgaaactatga
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integrated database retrieval system
