Rattus norvegicus (rat): 308023
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Entry
308023 CDS
T01003
Symbol
Ssx2ip
Name
(RefSeq) afadin- and alpha-actinin-binding protein
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04517
IgSF CAM signaling
rno04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
308023 (Ssx2ip)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
308023 (Ssx2ip)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
308023 (Ssx2ip)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
308023 (Ssx2ip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADIP
HEPN_RES_NTD1
RNaseH_C
Motif
Other DBs
NCBI-GeneID:
308023
NCBI-ProteinID:
NP_783187
RGD:
708490
Ensembl:
ENSRNOG00000015425
Vega:
OTTRNOG00000002293
UniProt:
Q8CGZ2
A6HWD4
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All DBs
Position
2:237958286..237991026
Genome browser
AA seq
613 aa
AA seq
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MGDWMTVTDPVLCTENKNLSQYTSETKMSPSSLYSQQVLCSATPLSKNVHGVFSAFCTGE
NIEQSISYLDQELTTFGFPSLYEESKSKEAKRELSIVALLNCMNELLVLQRKNLLAQESV
ETQNLKLGSDMDHLQSCYAKLKEQLEASRREMISLQERDRQLQCKNRNLHQLLKNEKEEV
QKLQNIIASRATQYNHDVKRKEREYNKLKERLHQLVMNKKDKNIAMDVLNYVGRVDGKRG
SWRTDKTEARNEDEMYKILLNDYEYRQKQILLENAELKKVLQQMKKEMISLLSPQKKKPR
ERAEDSTGTVVISDVEDDAGELSRDGVWSLSCDTVREQLTNSIRKQWRILKSHVEKLDNQ
ASKVHSEGFHEEDVISRQDHEQETEKLELEIERCKEMIKAQQQLLQQQLATACDDDTTSL
LRDCYLLEEKERLKEEWSLFKEQKKNFERERRSFTEAAIRLGLERKAFEEERASWVKQQF
LNMTTFDHQNSENVKLFSAFSGSSDPDNLIVHPRPRQKKPHSVANGVPACTSKLAKSLPT
SPSDFCPSRSCVSEHSPVSALTVTPEETKPNEVGRESTDQKWSVVSRPSSREGCYGGCSS
AYTSSHVERDDLP
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgggagattggatgactgttacagatccagttctgtgtacagaaaacaaaaatctctct
caatatacctcagaaacaaagatgtctccgtcaagtttatactcgcagcaagtactgtgc
tctgcaacacctttatccaagaatgtgcatggtgttttcagtgccttctgcacaggagag
aacatcgaacagagtatttcgtatcttgatcaggaactgactaccttcggtttcccttcc
ttgtatgaagaatccaaaagtaaggaggcgaagcgagagttaagtatagttgctcttctg
aactgcatgaatgagctgcttgtgcttcagcggaagaacctcctggcccaagaaagcgtg
gagacacagaatctgaagctgggcagtgacatggaccacctgcagagctgctacgccaaa
cttaaggaacagttggaggcctccaggcgagagatgatcagccttcaggagagagacaga
cagctacagtgcaaaaacaggaatttgcatcagctcctgaaaaacgagaaagaagaggta
caaaaattacaaaatatcatagccagtcgggctactcagtataatcatgatgtgaagaga
aaggagcgggagtacaataaactgaaggagcgtctgcatcagcttgttatgaacaagaag
gataaaaatatagccatggacgttttaaattacgtgggccgagtggatggaaagcgaggc
tcctggaggactgataaaacagaagccaggaatgaagatgaaatgtacaaaattctgctg
aatgattatgagtaccgccagaagcagatcctgctggagaatgcggagctgaagaaggtc
ctccagcagatgaagaaagagatgatctctctcctttctcctcaaaagaagaaacccaga
gaaagagcagaggacagcacaggcactgttgtcatctccgatgtagaagacgacgctggg
gagctgagcagagatggtgtgtggagcctttcctgtgacactgtcagggagcagcttaca
aacagcatcaggaagcagtggagaattctgaaaagccatgtggaaaaacttgataaccaa
gcttcaaaggtacactcagagggctttcatgaagaggacgtcatctcacgacaagaccat
gagcaagagactgagaaactggagctggagattgagcggtgtaaagagatgatcaaggct
cagcagcagctcttacagcaacagctggccactgcgtgtgatgacgacaccacctcactg
ttgcgagactgttacttgcttgaagaaaaggaacgccttaaagaagagtggtcccttttt
aaagagcaaaaaaagaattttgagagagaaagacgaagctttacagaagctgctattcgc
ttggggttggagagaaaggcgtttgaggaagagcgagccagctgggtgaagcagcagttt
ttaaacatgacgacctttgatcaccagaactcagaaaatgtgaaacttttcagtgccttt
tcaggaagttctgatccagacaatcttatagtccacccacggccacggcaaaagaagcca
cacagtgtcgctaatggggtaccagcttgcacatccaaactggctaagtctcttccgacc
tcaccttcagacttctgcccgtctcgctcatgtgtgtctgagcacagtcccgtcagtgcg
ctgactgtgactcctgaagaaaccaaaccgaatgaggttggaagagaaagtacggaccag
aagtggagcgtggtgtccagacccagctcccgggagggttgctacggtggatgctcctcg
gcctacacaagctcccacgtggaacgagatgacttaccatag
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