Rattus norvegicus (rat): 308099
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Entry
308099 CDS
T01003
Symbol
Fndc1
Name
(RefSeq) fibronectin type III domain-containing protein 1 isoform 2 precursor
KO
K24484
fibronectin type III domain-containing protein 1
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rno04990
]
308099 (Fndc1)
Domain-containing proteins not elsewhere classified [BR:
rno04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
308099 (Fndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TARSH_C
fn3
Pur_ac_phosph_N
Interfer-bind
Tissue_fac
CRLF2-like_D2
Motif
Other DBs
NCBI-GeneID:
308099
NCBI-ProteinID:
NP_001033704
RGD:
1310640
Ensembl:
ENSRNOG00000030210
UniProt:
Q2Q0I9
A0A128E118
LinkDB
All DBs
Position
1:49686856..49769263
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AA seq
1779 aa
AA seq
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MAPEARASPRLLLRAALLLLAALLPVASSAGPPVDHPLKPRHVKLLSANMGLKVTWDPPK
DATSRPVEHYNIAYGKSLKSLKSIKVNAETHSFLIKDVEKEVPNKPLRMRVRASDDRLSV
AWKAPRLSGAKSPRRSRGFLLGYGESGRKMNYVPLTRDERSHEIKKLASESVYVVSLQST
NSQGQSQPVYRAALTKRKNAEEDELDVPEDISVRVMSSQSVLVAWVDPLVEKQKRVVASR
QYTVRYREKGESARWDYKQVSNRRALVDSLIPDTVYEFAVRISQGERDGKWSASVFQRTP
ESAPTTAPENLRVWPVNGKPTVVTVSWDALPESEGKVKEYILSYAPALKPFGAKSLTFSG
HTTSALVDGLQPGERYLFKIRATNRRGQGPHSKAFIVAIPTTSSTEASVQPNGRDNGKPE
KPQQPSSSAPKVAASSQHMPPAKNVKDALSDLKNKIQTNGVAPGRTQLHSKVGELDPQST
EVTGEEELDSLENPRSSRLETLNQKQPLRVPSRSGHGALAPGRTPARAGLPVLSRKEGMD
RRGPSLDPHPHPRVEPSASSAYHQLSSTDNDSVDRKEDDQAGSPDPKAASSGSSPKNPGR
SRPTSAPSRHAASNMLRDKSRVHPGTKAASSSTSRQSHSSTSEEDSSAQPSRHFPLHRGS
STSPLSRGWKDRQDTHASSSHTTSRTASSSHPSALTEGSEEEDGGADSDRAAEDTIRRAE
ATAQIQQTRPGLGHFSLIRNKPFTPHSRNPNRFPRLRGPRLQPSVSPQSTSASKVLTRSP
SLPASHTRPGSDVYGDGEDEEPLPATVINDRTPSYPRHPISGSSDTLRRGPQRGASLYRK
EPIPENSKAAGADVPPGGRSPLSSKAQGFQQSTTDEGAPQTSPASTSRQPSPARPPASRS
QPSPGSTVPRRMTPDRSSELSSSQSKDRSLSQPKLSVAHAGHDHPHTANSRGVLPSAPQN
QNEGAQSTYEDNSTEIEGPDSRTPTHSARAKDTTPPILKPRQVGSQSWSSDNRPQPSQAG
ASERPIRPGSTHPRAQVPGRAGVQATSVKKVSPSKRPLPLESQQSVFAEEEEENEGMLKG
KEDSLSTSVKKWPSSSSPRDKYADRNLDKDKAAIGLLVQEENTVPGRRPPGSPAIASHPS
TRHQPRNPATASPIANTHSWPRYTTRAPSSYSSTTPMLSLRQRMQRRFRTPVSRQPPPPR
PVLTPGYNGRPNAEENIPPGSIGKPNGQRIINGPQGTKWVVDLDRGLVLNAEGRYLQDSH
GNPLRVRLGGDGRTIVDLGGTPMVSPDGLPLFGQGRHGKPVASAQDKPILSLGGKPLVGL
EVVRTTTQVPTTTMPPSTTTTTVPPTTTLPPTTTTTRRTTTTRRTTTTRRPTTTTRATRR
TTTTTTTPEPTTPSPTCPPGTLEHRDEAGNLIMGSNGIPECYPEEDDFSGLEIDTALPTE
EDYVVYDDDYGLETTRPPTSTMPSTTAATPKVVPEQGTVSSFPEEEFDLAGKRRFVAPYV
TYLSKDPAAPCSLTDALDHFQVESLDELIPNDLTKNDLPPQHAPRNITVVAMEGCHSFVI
VDWNKAIPGDVVTGYLVYSASYEDFIRNKWSTQTSSVTHLPIENLKPNTRYYFKVQAKNP
HGYGPVSPSVSFVTESDNPLLVVRPPGGEPIWIPFAFKHDPGYTDCHGRQYVKRTWYKKF
VGVVLCNSLRYKIYLSDNLKDTFYSIGDSWGRGEDHCQFVDSHLDGRTGPQSYVEALPTI
QGYYRQYRQEPVSFGHIGFGTPYYYVGWYECGVSIPGKW
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgaggccagggcgtccccgcgcctgctgctcagggcggcgctgcttctcctg
gcggcgctgctccctgtagcttcctcagcgggacccccagttgaccacccactgaagcca
aggcatgtgaaactgctgtccgctaacatgggcctgaaggtcacatgggacccacccaaa
gacgctaccagtagacccgtggaacattacaacattgcctatgggaagtcactgaaaagt
cttaagtccatcaaggtgaatgcggagacacactccttccttattaaagacgtggaaaag
gaagtgcccaacaagcccttgcgtatgcgcgtccgagcctcagatgacaggctgtctgtt
gcatggaaggcaccacgtctgtctggagccaagagcccacggagatctcggggttttctt
ctgggctacggggaaagtggccggaagatgaattatgtcccactgaccagagatgagaga
tcgcatgaaattaaaaagcttgcctctgagtcggtgtatgtggtctccctgcagtccaca
aactcccaggggcagagtcagcccgtctatagagctgccctcacaaagcgcaagaatgca
gaagaggatgaactggatgtacctgaagacattagtgtccgggtcatgtcgtctcagtcc
gtgctcgtggcctgggtggatcctcttgtggaaaaacagaagagagttgttgcatcaaga
cagtacactgtgcgctaccgtgagaagggggagtcggccaggtgggattacaagcaagtc
tccaacaggcgtgcactggtggacagcctgatcccagacaccgtgtatgaatttgcggtc
cgtatttcacaaggagagcgagatggcaagtggagcgcatctgtcttccagagaacgccg
gaatcggctcccaccacagcgcctgagaacctgagagtctggccagtcaacggcaagccc
acggttgtcaccgtatcctgggatgcattgccagagtctgaggggaaagtgaaagaatac
attctttcatatgccccggctctcaaaccgtttggagcaaagtccctcaccttctctgga
catactacttctgccctcgtggacggtctgcagcctggggaacgctatctgttcaaaatc
cgggccacaaacaggagaggccaggggccacactccaaagccttcattgtcgctatacca
acaaccagttctactgaagccagtgtccagccgaatgggagagacaatgggaaacctgag
aaaccacagcaaccttcttcctctgctcccaaagttgcagcctcctcacaacacatgccc
ccagccaaaaatgtcaaggatgctctctcggacttaaagaacaaaatccagactaatggt
gtggcgcccggaagaacccagcttcactctaaagtgggtgagctggatcctcagtccaca
gaagtcactggcgaggaggaactggattcccttgaaaatcctcgttcatcacggttggag
accctaaaccagaagcaacccttgagggtaccaagtagatctggtcatggggctctggct
cctggcaggactccagccagggctggcctgccagtgctgtcccgcaaggaagggatggac
aggcgtggcccctcactggacccccatcctcatcctagggttgaaccttcagcttcttct
gcctaccaccagctcagctctacagacaatgattctgtggaccgaaaggaggatgatcaa
gcaggatcccctgaccctaaagctgcctcttccgggtcatctcccaagaatccaggcagg
tccaggccaacctctgcccctagccgccatgcggcttctaacatgctcagagacaaaagc
cgggtacacccaggtacaaaggcagcatcatcatctacgtcgaggcagtctcattcttcc
accagtgaggaagactccagtgcccaaccctcgagacatttcccactgcatagaggatct
tctacatccccgctttctaggggctggaaggaccgccaggatacccatgcctctagttcc
catacgacttcccggaccgccagctcttctcatccctctgccctgacagagggctctgag
gaagaggatggcggcgctgatagtgacagagctgcagaagacaccatcaggcgggctgag
gccactgctcagatccaacagacccggcctggcttgggtcactttagtttgatacggaat
aaacccttcactcctcacagcagaaatccaaacagattccccaggctccgtggaccaagg
cttcagccttctgtgtctcctcagtctacctcagcctcgaaagtcctcaccaggtctcct
tcgctgccagcatcccacactaggcctggctctgatgtctatggagatggtgaggatgaa
gagcctcttccagccactgtgatcaatgaccgtacaccttcctatcccaggcacccaatc
tctggcagctcagacactctgagaagaggtccccagagaggggccagcttgtaccggaag
gagcccatcccagaaaactccaaagctgctggagcggatgtacctcctgggggcagatcc
cctctgtcctccaaggctcagggctttcaacagagcaccaccgatgaaggtgctcctcaa
acatccccagcatccaccagccgccagccgtcgcctgctagacctccagcatcaagatca
cagccctcccccgggtccactgttcccagaagaatgacacccgatcgcagctcagaactc
tctagttctcagagcaaggatcggtcactttcccagcccaagctgtccgtcgctcacgca
gggcatgaccaccctcacactgcaaactcccgtggggtgctcccctcagctccccagaat
cagaatgagggtgcccagagcacctacgaggacaacagcactgaaattgagggtccagac
tcccggactcccactcattcagctcgagccaaggataccactccacccattctcaaacct
cggcaggtgggctcccagtcatggagcagtgacaacagacctcagcccagccaggcagga
gcctctgaaagacccatccggcctggcagcacccacccacgggcccaggttcctggcagg
gctggggtccaggccacgtcagtgaagaaggtctcaccttccaagcggcccctgccactc
gaatctcagcaatcggtcttcgctgaggaggaagaggaaaacgaaggaatgttaaaaggc
aaagaagattctctgtctacctcagttaaaaagtggccttcttcctcctccccgcgggac
aagtacgcagacaggaaccttgacaaagacaaggctgccattggcctccttgtacaggaa
gagaacaccgtccccggaaggcgaccaccaggcagccccgcaatagcctcacacccatct
acccggcaccagcctcgaaatcccgccactgcaagtcccatcgcaaacacacactcctgg
ccaaggtataccacccgggccccttccagctactcctccaccacaccgatgctctccttg
cggcagcggatgcagcggaggtttaggacgccagtctcgcgccagcctccaccgcccaga
cccgtgcttacaccaggttataatggaagaccaaatgcagaagagaacatacctcctggt
agtattggaaaaccaaacggacagagaattattaatggtcctcaaggaacaaagtgggtt
gtagacctggatcgtggcttggtgttgaatgcagaagggcggtacctccaagactcccac
ggcaatcctctccgggtgagactcgggggagacggtcgcaccatcgtggatcttggagga
acccctatggtgagtcccgatggcctccccctgtttgggcagggaagacatggcaaacct
gtggccagtgcccaggataaacccatcttgagtcttggagggaagcccttagtgggcttg
gaagtggtcagaacaaccacccaagttcctaccacaaccatgccgccaagcacaacgacc
accactgtgccgcccaccacaaccctgccgcccacaaccaccaccacccgccggaccacc
accacccgccggaccaccaccaccaggcgtcccacaaccacaacccgagctactcgcagg
acaactaccactaccaccactccggaacctaccaccccctctcctacctgtcctcctggg
accctggaacaccgggatgaagctggcaacctcataatgggctcaaatgggatcccagag
tgctaccccgaggaagatgacttctccggcctggagatagacacagcactacccacggaa
gaggattatgttgtgtacgatgacgattatggacttgagaccacaaggccaccgaccagc
accatgccctcaaccactgctgccacaccgaaggtcgtcccagagcagggcactgtcagc
tccttcccagaggaagaatttgaccttgccggaaagaggcggtttgttgctccttacgtg
acctacctcagtaaagacccagcagccccgtgctcactgactgatgccctggaccacttc
caagtggaaagcctggatgaacttattccaaatgacttgacaaagaacgatctccctcct
cagcatgctccccggaacattactgtggtcgccatggaaggctgccactcctttgtcatt
gtggactggaacaaagccatccctggagatgtggtaacaggatacctggtctacagcgcc
tcttatgaggacttcatcaggaataaatggtcaactcagacctcgtcagtgacccatttg
cccattgagaacctgaagccaaacacaaggtattacttcaaagttcaagcgaaaaaccct
cacggctatgggcctgtcagcccttcagtctcatttgtcacagaatcagacaatcctctg
ctggttgtgaggccaccaggtggtgagcccatctggatcccgtttgctttcaagcatgac
cccggctacactgactgccatggtcggcagtatgtgaaacggacgtggtacaaaaagttt
gtgggagttgttctttgtaattctctaaggtacaagatctacctcagtgacaatctcaaa
gacacattctacagcattggggacagctggggaaggggtgaagaccattgtcagtttgtg
gattcgcacctggatggaagaacggggcctcagtcttatgtagaagccctccccaccatt
caaggctactatcgccagtaccgtcaggagcccgtcagctttggacacattggatttgga
accccctattactatgtgggctggtacgagtgtggagtctccatcccaggaaagtggtaa
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integrated database retrieval system