Rattus norvegicus (rat): 308335
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Entry
308335 CDS
T01003
Symbol
U2af2
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 2
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
308335 (U2af2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rno03041
]
308335 (U2af2)
Spliceosome [BR:
rno03041
]
Complex A
U2 snRNP components
U2 related factors
308335 (U2af2)
Complex B
308335 (U2af2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Transformer
Motif
Other DBs
NCBI-GeneID:
308335
NCBI-ProteinID:
NP_001414126
RGD:
1310690
Ensembl:
ENSRNOG00000015914
UniProt:
A6KNR7
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All DBs
Position
1:complement(77789752..77807307)
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AA seq
471 aa
AA seq
DB search
MSDFDEFERQLNENKQERDKENRHRKRSHSRSRSRDRKRRSRSRDRRNRDQRSASRDRRR
RSKPLTRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIPATA
LLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQ
APGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSE
NPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSK
GYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLM
SSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGV
EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDFW
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttcgacgagttcgagcggcagctcaacgagaataaacaagaacgggacaag
gaaaaccggcaccggaagcgtagtcatagtcgctctcgaagccgggaccgaaagcgcagg
agccggagccgagatcggcgtaaccgggaccagcgcagtgcctcccgggacaggagacga
cgaagcaaacctttgaccagaggcgctaaagaggagcacggtggattgattcgttccccc
cgccatgagaagaagaagaaggttcgtaaatactgggacgtgccaccgcctggctttgag
cacatcaccccaatgcagtacaaggccatgcaagctgcgggtcagattccagccactgcc
cttctcccgactatgactcctgatggtctggctgtgaccccaacgccagtgcctgtggtt
gggagccagatgaccagacaggccagacgtctctacgtgggcaacatcccttttggcatc
actgaggaggctatgatggacttcttcaacgcccagatgcgcttgggggggttgactcag
gcccctggcaacccagtcttggctgttcagataaatcaagacaagaattttgcctttttg
gagttccggtcagtggatgagacgacccaggccatggcctttgatggcatcatcttccag
ggccagtcattgaagattcgaaggcctcatgactaccagccactgcctggcatgtcagag
aacccctctgtttatgtgcctggagttgtatccactgtagtcccagattctgcccataag
ctgttcatcgggggcttgcccaactacctgaatgatgaccaggtaaaagaactgctgaca
tcctttgggcctctaaaggccttcaacttggtcaaggatagtgccacagggctctccaag
ggctatgccttctgtgagtacgtggacatcaacgttacagatcaggctattgcggggctg
aatgggatgcagctaggggacaagaagctgcttgtccagagggcgagtgtgggagccaag
aatgccacgctgagcaccatcaatcagacacctgtgacccttcaagtgcccggcctgatg
agctctcaggtgcagatgggcggtcacccaactgaggtcctgtgcctcatgaacatggtg
ctccctgaggagctgctggacgatgaggaatatgaggaaattgtagaggatgtacgagac
gagtgcagcaagtatgggctggtcaaatccattgaaattcctcggcccgtggatggcgtc
gaggtgcctggctgcggaaagatctttgtggagttcacctctgtgtttgactgccagaaa
gccatgcagggtctaaccggccgcaagttcgccaacagagtggtggtcacaaaatactgt
gaccctgactcgtaccaccgtcgggacttctggtag
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