Rattus norvegicus (rat): 308458
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Entry
308458 CDS
T01003
Symbol
Sptbn4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04517
IgSF CAM signaling
rno04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
308458 (Sptbn4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
308458 (Sptbn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rno04812
]
308458 (Sptbn4)
Cytoskeleton proteins [BR:
rno04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
308458 (Sptbn4)
Intermediate filaments
Intermediate filament-binding proteins
308458 (Sptbn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
Rv3651-like_N
FlgK_D1
Motif
Other DBs
NCBI-GeneID:
308458
NCBI-ProteinID:
NP_001094315
RGD:
1304682
Ensembl:
ENSRNOG00000055371
UniProt:
A0A0G2K677
LinkDB
All DBs
Position
1:complement(91778379..91865970)
Genome browser
AA seq
2561 aa
AA seq
DB search
MAQVPGEVDNMEGPAASNNNNPAARWESPDRGWDREPPAAANAAASLFECSRIKALADER
EAVQKKTFTKWVNSHLARVGCHIGDLYADLRDGFVLTRLLEVLSGEQLPRPTRGRMRIHS
LENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRET
RSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDLSKLTKSNANY
NLQRAFRTAEQHLGLARLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRIGK
VLDQVLEVDKIIERYEELAAELLAWIHRTVDLISNQKFANSLSGVQQQLQAFTAYCTLEK
PVKFQEKGNLEVLLFSIQSKLRAHNRRLFVPREGCGIWDIDKAWGELEKAEHEREAALRA
ELIRQEKLELLAQRFDHKVAMRESWLNENQRLVSQDNFGYELPAVEAAMKKHEAIEADIA
AYEERVQGVAELAQALAAEGYYDARRVAAQRDSVLRQWALLTGLVGARRTRLEQNLALQK
VFQEMVYMVDWMEEMQTQLLSRECGQHLVEADDLLQKHGLLEGDIAAQSERVEALNAAAL
RFSQLQGYQPCDPQVICNRVNHVHGCLSELQEQAARRRAELEASRSLWALLQELEEAESW
ARDKERLLEATSGSGGAAGTAGGAHDLSSTARLLAQHKILQGELGGRRALLQQALRRGEE
LAAAGGSVGPGAEPLHLAGLAERAASARRRWQRLEEAAARRERRLQEARALHQFGADLDG
LLDWLRDAYRLAAAGDFGHDEASSRRLARQHRALTGEVEAHRGPVGGLRRQLATLGGASG
AGPLVVALQVRVVEAEQLFAEVTEVAALRRQWLRDALAVYRMFGEVHACELWIGEKEQWL
LAMRVPDSLDDVEVVQHRFESLDQEMNSLMGRVLDVNQTVQELVEGGHPSSDEVRSCQDH
LNSRWNRIVELVEQRKEEMSAVLLVENHVLEVAEVRAQVREKRRAVESAPRAGGALQWRL
SGLEAALQALEPRQAALLEEAALLAERFPAQATRLHQGAEELGAEWGALAGAAQACGEAV
AAAGRLQRFLRDLDTFLDWLVRAQEAAGAVEGPLPRSLEEADGLLARHAALKEEVDQREE
DYARIVAASEALLASDGAELGPGLALDEWLPHLEVGWHKLLGLWEERREALVQAHVYQLF
LRDLCQALAVLRNQEVALSGAELPCTVESVEEAMKRHRDFLTTMELNQQKMQVAVQAAEG
LLRQGNAYGEQAQEAVARLLEKSQENQLRAQQWMQKLLDQLVLQHFLRDCHELDGWIHEK
MLMARDGTREDSHKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLMQEKPELAASVRKK
LGEIRQCWAELESTTQAKARQLFEASKADQLVQSFAELDKRLLHMESQLQDVDPGGDLAT
VNSQLKKLQSMESQVEEWCREVGELQAQTAALPLEQASKELVGERQSAVGERLVRLLEPL
QERRRLLLASKELHQVAHDLDDELAWVQERLPLAMLTERGTGLQAVQQHIKKNQGLRREI
QAHGPRLEEVLERAGVLASLRSPEAEAVRRGQEQLQSAWTGLREATERRQQTLDAAFQVE
QYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEESIAQLSRQC
RALLEMGHPDSEQISRRQSQVDRLYVALKELGEERRVSLEQQYWLYQLSRQVDELEHWIA
EKEVVAGSPELGQDFEHVSVLQEKFSEFASETGTAGRERLAAVNQMVDELIECGHTAAAT
MAEWKDGLNEAWAELLELMGTRAQLLAASRELHKFFSDARELQGQIEEKRRRLPRLTAPP
EPRPSASSMQRTLRAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEHAEAIASREQEVLQGW
KELLAACEDARLHVSSTADALRFHSQARDLLSWMDGIAGQIGAADKPRDVSSVEVLMNYH
QGLKTELEARVPELTACQELGRSLLLNKSAMADEIQAQLDKLGSRKEEVSEKWDRHWEWL
QQMLEVHQFAQEAVVADAWLTAQEPLLQSRELGSSVDEVEQLIRRHEAFRKAAAAWEERF
SSLRRLTTIEKLKAEQSKQPPTPLLGRKFFGDPTELAAKAAPLLRPGGYDRGLEPLARRA
SDTLSAEVRTRVGYVRQELKPERLQPRIDRLPETSGKVEPAAPTAAALDTTDTPGTPAVT
EQVRPRPERQELADRAEELPRRRRSERQESTDQPEEAARRRRPERQESADHEGPHSLTLG
RYEQMERRRERRERRIERQESSEQETPTRGELVKGKATLADIVEQLQEKEAGPGLPAAVP
SLPQPRELPPGRLPNGLEPPERTPRPDRPRARDRPKPRRRPRPREGGEGGGSRRSRSAPA
QGGSAPAPPPPPTHTVQHEGFLLRKRELDANRKSSNRSWVNLYCVLSKGELGFYKDSKGP
ASGGTHGGEPLLSLHKATSEVASDYKKKKHVFKLQTQDGSEFLLQAKDEEEMNGWLEAVA
NSVAEHAEIARWGQTLPTTSSTDEGNPKREGGERRASGRRK
NT seq
7686 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagtaccaggggaagtggacaacatggagggcccggcagcctccaacaacaac
aaccctgcagcccgctgggagagcccagatcggggctgggaccgggagcctccggcagcc
gccaacgctgccgcttcgctcttcgagtgttctaggatcaaggccttagcagatgaacga
gaggctgtgcagaagaaaaccttcaccaagtgggtgaattcgcacctcgctcgcgtgggc
tgccacatcggagacctgtatgcagacctgagggatggctttgtcctcacccggctcctg
gaagtgctgtcgggggagcagctgccgagacccactcgcggccgcatgcggatccactcg
ctggagaacgtggacaaggctctgcagttcctgaaggagcagcgcgtgcacctggagaac
gtggggtcacatgacatcgtggatgggaaccaccgactgacgctggggctggtctggacc
atcatcctgcgcttccagattcaagtcatcaagattgagacagaagacaacagagagacc
cgctcggccaaggacgctctgctcttgtggtgccagatgaagacagctggttaccctgag
gtaaacatccagaatttcactactagctggagagatggcctggccttcaatgccctcatc
catcgccacaggcctgatcttgtggacctcagcaaacttaccaagtccaacgccaactac
aacctgcagagagctttccgcacagccgagcagcacctggggctagcacgtctgctggac
cccgaagacgtgaacatggaggctccagatgagaagtccatcatcacctacgtggtctcc
ttctaccactacttctccaagatgaaggctctggctgtggagggaaaacggattgggaag
gtcctggaccaggtgttggaggtggacaagatcatagagcgctacgaggagctggcggcg
gagctgctggcctggatccaccgcaccgtggacctcatcagcaaccaaaagtttgccaac
tcactgagtggggtgcagcagcagctgcaggctttcactgcctactgtaccctggagaag
ccggtcaagtttcaggagaaggggaacctggaggtgctactcttcagcatccaaagcaaa
ctgcgcgcccacaaccggcgcctctttgtgcctcgggaaggctgtggcatctgggatatt
gacaaggcatggggtgagctggagaaggcagagcatgagcgagaggcagccctcagagct
gagctcatccgacaggagaagttggaactcttggctcaaagatttgaccacaaggtggcc
atgagggagagctggctaaatgagaaccagcgcctggtctctcaggacaacttcggatat
gagctgccggcagtggaggcagccatgaagaagcacgaagccatcgaggctgacatcgcg
gcctacgaggagcgggttcagggtgtggcggagctagcccaggcattggcagctgaaggc
tactatgatgcccggcgagtggcagcccagcgtgacagcgtcctccgccagtgggccctg
ctgactgggctggtaggtgcccggcggacccggcttgagcagaatctggccctgcagaag
gtcttccaggagatggtctacatggtggactggatggaggaaatgcagactcagctgctg
tctcgggaatgtgggcagcacctggtggaggctgatgacctgctgcagaagcatgggcta
ctggagggcgacatcgcagcccagagcgagcgggtggaggccctcaatgctgcagccctg
agattctcccagttgcagggctaccaaccctgcgaccctcaggtcatttgcaaccgtgtg
aaccacgtgcacggttgtctgtcggagctgcaggagcaggcggcgcggcggcgcgcggag
ctggaagcctctcggagcctgtgggcgctgctgcaggagctggaggaggcggagagctgg
gcacgggacaaggagcgcctcctagaggccacgagcggcagtggtggcgcggcgggcacg
gcgggaggcgcgcacgacctgtccagcaccgctcgcctgctggcgcagcacaagatcttg
cagggcgaactgggcggccggcgggcgctactgcagcaggcgctgcgacgtggagaggag
ctggctgcggcgggcggctccgtgggccccggcgccgagcccttgcacttggctggtctg
gcggagcgcgcggctagcgctcggcgccgctggcagcgactggaagaggcggctgcgcgc
cgggaacggaggctgcaggaggcacgggcgttgcaccagtttggcgccgacctggacggg
ctcctggactggcttcgcgacgcgtatcgtctggcagccgccggagatttcggtcacgac
gaagcgtccagccgtcgcctggcgcgccagcaccgagctctcaccggggaggtggaagcg
caccgtggccctgtgggtggcctgaggcgtcagctggcaacactgggaggagccagtggc
gccgggccgctggtggtggcgctgcaggtgcgcgtggtggaagcagaacagttgttcgcg
gaggtgaccgaggtggccgcgctgagacgacagtggcttcgggacgcgctcgcggtgtac
cgcatgtttggagaggtgcatgcctgcgagttgtggatcggagagaaagagcagtggctg
ctggccatgcgtgtgcccgactccctcgacgacgttgaggtggtgcagcaccgatttgaa
agtctggaccaggaaatgaacagcctaatgggccgagtcttggatgtgaaccaaacagtt
caggagttggtggaaggaggtcaccccagctccgatgaggtgcgctcctgtcaggaccat
ctcaacagcaggtggaaccgcatcgtggagctggtagaacagcgcaaagaggagatgagc
gccgtgctgctggtggagaaccatgtactggaggtggccgaggtgcgcgcccaggtgcga
gagaagcggagggcggtggagagcgcgccccgggcgggcggagccctgcagtggcgcctg
agtggcctggaggcggccctacaggctctggagccgcgacaggccgcacttctggaggag
gcggcgttgttggcggaacgcttcccggcacaggcgacgcgcctgcaccagggcgccgag
gagctgggagcggagtggggtgcactggctggagcggctcaggcttgcggagaggcggtg
gcggcggcaggtcgcctgcaacgtttcctgcgcgatttggatactttcctggactggctg
gtgcgtgcgcaggaggcagcgggcgccgtcgaggggcctctgccgcgtagcctggaggag
gcggacgggctgctggcgcgccatgccgcactcaaggaggaggtggatcagcgcgaggag
gactacgcgcgcatcgtagctgccagtgaggcgttgctggcgtccgacggtgccgagctg
ggccccggtctggcgctagacgaatggctgccgcatctcgaggttggctggcacaaactg
ctcggcttgtgggaggagcgcagggaggctctggtccaggcgcacgtctatcagctcttc
ctgagagacctgtgccaggcgctcgcggtgctgcgcaaccaggaggtggcgctgtctggc
gctgaactcccttgcacagtggagtcggtagaggaggccatgaaaaggcaccgggatttc
ctcaccacgatggagctgaaccagcaaaagatgcaggtggcggttcaagctgcagagggc
ctgctgcggcaaggcaacgcctacggggagcaggcgcaggaggcagtggcccggctgcta
gagaagagccaagaaaatcagctgagggcccagcagtggatgcaaaaactcctggaccag
cttgtgctgcagcactttcttagagattgtcatgagctggatggctggatccacgagaaa
atgctgatggctcgtgatggcacccgagaagacagccacaagctgcacaagagatggctc
cggcaccaggcgttcatggctgagctggctcagaataaggagtggctggagaagatagaa
agggagggccagcaactgatgcaggagaaaccggagctggcagcttctgtgcgcaagaaa
ttaggtgagatccggcagtgctgggcagagctggagagcaccacacaggccaaggcgcgc
cagctcttcgaggccagcaaggcggaccagctggtgcagagcttcgcagagctggacaag
aggctgctccacatggaaagccagttgcaggacgtagaccccggtggagacctggccacc
gtcaacagccagctcaagaagttacagtctatggagtctcaggtggaggagtggtgtcga
gaggtgggcgagctgcaggcgcagacagcggcgcttccactggagcaggcgagcaaggag
ttggtgggcgagcggcagagcgcggtgggagagcgcctggtgcgcctgctggagcctttg
caggagcgtcgccgcttgctgctggcatccaaggagctgcatcaggtggcacacgacctg
gatgacgaactggcgtgggttcaagagcggctgccgctggccatgctgacagagcgaggc
actggcttgcaggctgtccagcagcacatcaaaaagaaccagggcctgaggcgggagatc
caggctcacgggccgcgcttggaggaggtgctggagcgcgcgggcgtgctggcctcgttg
cgcagcccggaggctgaggcggtgcgccgcggccaggagcagctgcagagcgcctggacc
ggactgcgggaagccactgaacggcggcagcagacgctggacgccgccttccaggtggaa
cagtactactttgacgtggctgaggtggaggcatggctgggcgagcaggagctgctcatg
atgagtgaggacaagggcaaggatgaacaaagcactctgcagctgctcaagaagcatctg
caactggagcagggagtggagaactatgaagaaagcattgcccagctgtcacgccagtgc
cgggcgctactggaaatgggacacccagacagtgagcagatcagccgtcgacagtcccag
gtggatcgcctctatgtggcgctcaaggagctgggtgaagagcgcagggtgagcctggaa
cagcagtactggctataccagctcagccgccaggtggacgagctggaacactggatagcc
gagaaggaggtggtagctggttcaccagagctgggccaggactttgaacatgtgtcggtg
ctacaggagaaattctcagagttcgccagtgagacaggaaccgcagggcgggagcggctg
gcagcagtaaaccagatggtggacgagctgattgagtgtggccacacagcagcggccacc
atggctgagtggaaggacgggctgaacgaggcctgggctgaactgctggagctcatgggc
actcgggcccagctgcttgctgcctctcgggagctgcataagttcttcagtgatgcccga
gagcttcaagggcagatcgaggagaagcggaggaggctgccccgcctgacggcaccacct
gagcccagacccagcgctagctccatgcagcggaccctgcgagcctttgagcacgacctg
cagctcctcgtgtcgcaggtgcggcagctgcaggaaggggcggcccagttgcggactgtg
tacgcgggcgagcacgcagaggccatcgccagccgtgagcaggaggtgttgcagggctgg
aaggagctgctggcagcctgtgaggatgctcgtctgcacgtcagctccacggctgacgcc
ctgcgcttccacagccaggcccgagacttgctctcctggatggacggcatcgcgggccag
atcggggcagctgacaaacccagggatgtatcatccgtggaggtgcttatgaactaccac
cagggcctgaagacagaattggaggctcgtgtgcctgagctgacagcctgccaggagctg
gggcgttctctattactcaacaaaagtgccatggctgatgagatccaggcacagttggac
aagctgggaagccggaaggaggaggtgtcggagaagtgggaccggcactgggagtggctg
caacagatgctggaggtacaccagtttgctcaggaggccgtggtggctgacgcctggctg
acagctcaggagccgctcctgcagagccgggagctgggcagcagtgtggatgaggtggag
cagcttatccggcgacacgaggccttccgaaaagcggctgcggcgtgggaggagaggttc
agctctctgcggcgcttgaccacgatcgagaaactcaaggcagaacagagtaagcagcca
cccaccccattgctggggcgcaagttctttggggaccccacagagctggcggccaaggca
gcacccttgctgcgtccagggggctatgacaggggcctggagcctttggcccgcagggcc
tcggacacgctgtcagcggaggtgcggacccgggttggttatgtgcgccaggagctcaag
cccgagcgtctccagccgcgcattgaccggctgccggagacctcggggaaggtagaaccc
gcggccccaacagccgcagcgttggacacgacggacacccctggaactccggcggtgacg
gagcaggtccggccccggccggagcgccaggagttagcggatcgtgcggaggagctgcca
cggagacgaagatcagaacgccaggagtccacggatcaacccgaggaggcagcgcggagg
cggcggcctgagcgccaggagtccgcggaccacgaggggcctcacagccttactctgggt
cgctatgagcaaatggagaggcggagggagcggcgggagcggcggatagaacgacaggag
tctagcgagcaggagactcccaccagaggagagctggtcaaagggaaggccaccctggct
gacatcgtggagcagcttcaggagaaagaggcaggcccagggctccctgctgcggtgccg
tcgctgcctcagcctcgggagcttccccctggtcgcctgcccaacgggcttgagccgccc
gagcggacacctcggcccgatcggccgcgggcacgggaccggcccaagccccgccggcgg
ccacggcctcgagagggtggtgagggcgggggaagccggcgctcgcgctccgcccctgct
cagggaggctccgcccccgcgcctccacctccgcccactcacacagtgcagcacgagggc
ttcctgctgcgcaagcgcgagctcgacgctaaccgcaagtcgtccaaccggtcgtgggtg
aacctgtactgtgtgctcagcaagggggagctgggcttctacaaggactccaaaggccca
gcatcagggggcacgcatggcggggagccactgctcagcctgcacaaagccaccagcgag
gtggctagtgactacaagaaaaagaagcatgtcttcaagctccaaacccaggatggcagc
gagttcttgctccaggctaaagatgaggaggagatgaacggctggctggaggctgtggct
aactccgtggcagaacacgccgagatcgcccgatggggccagacactacctaccacatca
tccacagacgagggcaaccccaagcgtgagggcggggagcgtagggccagcgggcgccgg
aagtga
DBGET
integrated database retrieval system
