Rattus norvegicus (rat): 308666
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Entry
308666 CDS
T01003
Symbol
Cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04519
Cadherin signaling
rno04810
Regulation of actin cytoskeleton
rno05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
308666 (Cyfip1)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
308666 (Cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
308666 (Cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
308666 (Cyfip1)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
308666 (Cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
308666 (Cyfip1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
zf-CW
LRIF1
BP28CT
Motif
Other DBs
NCBI-GeneID:
308666
NCBI-ProteinID:
NP_001100987
RGD:
1310332
Ensembl:
ENSRNOG00000011945
UniProt:
D4A8H8
A6KD28
LinkDB
All DBs
Position
1:115842754..115935163
Genome browser
AA seq
1253 aa
AA seq
DB search
MAAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVISGYEELLAD
IVNLCVDYYENRMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLSKIDKYFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSSSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLALQGLQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTTEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTV
YAALQDFSQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWETGHEPFNDPALRGEKDPK
SGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF
FYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYSLDLYNDSAHYALTKFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGS
LLLDKRLRSECKNQGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYKSL
ELAIGRFESEDLTSVVELDGLLEINRMTHKLLSRYLTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLHGSKALNLAYSS
IYGSYRNFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLIEQSLSLEEVC
DLLHAAPFQNILPRVHVKEGERVDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRIRTFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFAVLDFCYHLLKVQKHDGKDEIIKNVP
LKKMVERIRKFQILNDEIITILDKYLKSGDGESTPVEHVRCFQPPIHQSLASS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccaagtgacactagaggacgcactgtccaatgtggacctcctggaagagctg
cctcttcctgaccagcagccctgcattgagcccccaccttcctcgctgctctatcagcca
aatttcaacaccaactttgaagaccgaaatgcatttgtcactggcattgcaagatacatt
gaacaagcaactgtccactctagcatgaacgagatgctagaggaaggccaagagtatgct
gtcatgctgtatacctggaggagctgctcccgtgccatccctcaggtgaagtgcaatgag
cagcctaatagggttgaaatttatgagaaaactgtggaagtccttgaacccgaggtcaca
aaactgatgaattttatgtacttccagagaaatgccatcgagcgtttctgtggggaggtg
agacgcctgtgtcatgctgagaggagaaaggacttcgtgtctgaagcctacttgatcacc
ttgggcaagtttatcaacatgtttgctgtgttggatgagctgaagaacatgaagtgcagt
gtgaagaatgaccactcagcgtataagagggctgctcagtttttacgtaaaatggcagat
ccacaatccatccaggagtcacagaatttgtccatgttcctggccaaccacaacaagatt
acacaatctctacagcaacagcttgaggtcatttctggctatgaagaactcctggcagac
atagtgaatctgtgtgtggactactatgagaacagaatgtacttgacgcccagcgaaaaa
cacatgcttctcaaagtcatgggatttggtctgtacctgatggatgggagtgtgagtaac
atctacaaactagatgccaagaaaagaataaatttatccaaaatagacaagtatttcaag
cagctgcaggtggttccactctttggagatatgcagatagaactggcaagatacatcaag
accagcgcacactatgaggagaataagtcccggtggacctgtacgtcctcgagcagcagc
ccacagtacaacatctgtgagcagatgatccagatccgtgaggaccacatgcgtttcatt
tctgagctggcacgctacagcaatagcgaggtagtcacagggtctggccggcaggaggcc
cagaagacagatgctgagtaccggaagctctttgacctggcgctgcagggcctgcagctt
ctgtcgcagtggagcgcgcatgtgatggaagtgtattcctggaaacttgtacatccaaca
gacaagtactccaacaaggactgcccagacaatgctgaggagtatgaacgtgccacgcgt
tacaactacaccactgaggagaagtttgctctggtggaggtgattgccatgatcaaaggc
ctgcaggtgctgatgggcaggatggagagtgtgttcaatcacgccatcagacacacagtt
tatgctgcacttcaggacttctcccaggtgaccctcagggaaccactgcgacaggccatc
aagaagaaaaagaatgtcatccagagtgtcctacaggccatcaggaagactgtgtgtgac
tgggagactgggcatgaaccctttaacgacccagctctgcggggagagaaggaccctaag
agcggctttgacatcaaggtgccacgccgtgctgtaggaccctccagcacacagctttac
atggtgagaactatgctagagtccctcattgcagacaaaagtggttccaagaaaaccttg
agaagtagccttgaggggcccaccatattggacatagaaaaatttcatcgagaatcattc
ttctacactcacttgataaatttcagtgaaacactgcagcagtgctgtgacctttcccag
ctgtggttccgagagttcttcctggagctgaccatgggcaggaggatccagttccccatt
gagatgtctatgccctggattctgactgaccacatcctagagaccaaggaggcatcaatg
atggagtacgtcctctactccttggacctgtacaatgacagtgctcactatgcgctcacc
aagttcaacaagcagtttctctatgatgaaattgaagcagaggtgaatctgtgttttgac
caatttgtttataaactggcagaccagatatttgcatattacaaggttatggcaggaagt
ttgcttcttgacaaacggttacgatcagaatgcaaaaatcagggagccacgattcacctc
ccaccgtctaaccgctatgagacgttgttgaagcaaaggcacgtgcagctgcttgggaga
tccatcgatctcaatcgtctgattacacagcgtgtttcagcagccatgtacaaatctcta
gaactggcaattggacgatttgaaagtgaagatttaacatcagtagtcgagctagatggg
ctcttagaaatcaaccgtatgacgcacaagctgctgagtaggtacctcacactagacagc
tttgatgccatgttccgggaagccaaccacaacgtgtctgcaccttatggaagaatcacc
ctccatgtcttctgggagctaaactatgacttcttgcccaactactgctataatggctcc
accaaccggtttgttcggacagtactaccattttctcaggaatttcaacgagacaaacaa
cctaatgcacagccccagtatttgcacggctccaaggctttgaacctagcctactcaagc
atttatggcagctaccggaactttgtggggcctcctcacttccaggtcatctgccggctg
cttggctaccagggcattgcagtcgtcatggaagaactgctgaaggttgtcaagagcctg
cttcaaggcacaatcctgcagtatgtgaaaactctgatggaagtgatgcctaagatctgc
cgccttccccgacatgagtacggctctcctggcatcctagagttcttccaccaccagctg
aaggacattgtggagtatgcagagctgaaaacagtatgcttccagaacctgcgggaggtg
ggaaatgctgttctcttctgcctgctcatcgagcaaagcctgtctttagaagaagtctgt
gacctgttgcatgcagctccttttcagaatatcctgcctcgagtccacgtaaaagagggg
gagagagttgatgccaaaatgaaaagactagaatccaagtatgctccactgcatcttgtt
ccgctgattgaaaggctggggaccccacagcaaattgcaatcgcaagagagggggacttg
ctgaccaaggagcggctctgttgtggtctgtccatgtttgaagtcatcctcacacggatc
cggacctttctggatgatcccatctggcgtgggcccctgcccagcaatggggtcatgcat
gtggatgagtgtgtggagtttcacagactatggagtgccatgcagtttgtttactgcatt
cctgtagggacacacgagtttacagtggagcagtgttttggcgatgggctccactgggct
ggctgcatgatcattgtacttctgggacagcagcggcgctttgctgtgttggatttctgc
tatcatcttctcaaagttcagaaacacgatggcaaggatgagatcatcaaaaatgtgcca
ttgaagaagatggtggagaggattcgcaagttccagattctcaatgatgagatcatcact
atcctggacaagtacttgaaatctggagatggggagagcacacctgtggaacatgtacgc
tgcttccagccacccatccaccagtccctagccagcagctga
DBGET
integrated database retrieval system
