Rattus norvegicus (rat): 308738
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Entry
308738 CDS
T01003
Symbol
Chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
308738 (Chd2)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
308738 (Chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
308738
NCBI-ProteinID:
NP_001100993
RGD:
1310056
Ensembl:
ENSRNOG00000012716
Vega:
OTTRNOG00000000629
UniProt:
A6JBX9
A0A096MJY0
LinkDB
All DBs
Position
1:complement(136597993..136726874)
Genome browser
AA seq
1834 aa
AA seq
DB search
MMRNKDKSQEEDSSLHSNASSHSASEEASASDSGSQSESEQGSDPGSGHGSESNSSSESS
ESQSESESESAGSKSQPVLPEAKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPS
RFNIKEEASSGSESGSPKRRGQRQLKKQEKWKQDPSEDDQEQGSSAESEAEQKKVKARRP
IPRRTVPKPQVKKQPKIQRGKRKKQESSDDDDDDDEAPKRQTRRRAAKNVSYKEDDDFET
DSDDLIEMTGEGVDEQQDNSETIEKVLDSRLGKKGVDLNPFAATGASTTVYAVEANGDPS
GDFDTEREEGEIQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLG
KVSPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSALGQTDFPAHSRKPAPSNEPEY
LCKWMGLPYSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQ
PAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLY
GPFLIVVPLSTLTSWQREFEIWAPEVNVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALI
TTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSL
KELWSLLHFIMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKV
EQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIRAPED
SERETGQEVLQSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYP
FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQN
DLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLEN
NSGRSNSNPFNKEELTAILKFGAEDLFKEIEGEESEPQEMDIDEILRLAETRENEVSTSA
TDELLSQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELEEIYMLPRI
RSSTKKAQTNDSDSDTESKRQAQRSSASESETDDSDDDKKPKRRGRPRSVRKDLVEGFTD
AEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELVHNSCVSAMQEYEEQLK
ENASEGKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYCLTCRVK
AAHFDVEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVETDKKPQGKQLQTR
VDYLLKLLRKGLEKKGTVTSGEEAKLKKRKPRVKKENKAPRLKDEHGLELSSPRHSDNPS
EEGEVKDDGLEKSPTKKKQKKKENKENKEKPVSSRKDREGDKEKKKSKDKKEKVKGGDAK
SSSKSKRSQGPVHITAGSEPVPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKGL
NVQEQLEHTRSCLLKIGDRIAECLRAYSEQEHIKLWRRNLWIFVSKFTEFDARKLHKLYK
MAHKKRSQEEEEQKKKDDTLGGKKPFRPEASGSSRDSLISQSHASHNLHPQKPHLPASHG
PQMHGHPRDTYSHPNKRHFSNADRGDWQRERKFNYGGGNNAPWGGDRHHQYEQHWYKDHH
YGDRRHMDAHRSGSYRPNNMSRKRPYEQYNSDRDHRGHRDYYDRHHHDSKRRRSDDFRPQ
NYHQQDFRRMSDHRPTMGYHGQGPSDHYRSFHTDKLGEYKQPMPTLHTALSDPRSPPAQK
SPHDSKSPLDHRSPLERSLEQKNNPDYNWNVRKT
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaataaggacaaaagccaagaggaggacagttcgctacacagcaatgcatcg
agtcattcagcctctgaagaagcttcggcttcagactctggcagtcagtctgaaagtgag
cagggcagcgatcccggaagtggacatggcagcgagtccaatagcagttcggaatcttct
gagagccaatcagagtctgagagtgaatcagcaggttccaaatcccagccagtccttcca
gaagccaaagagaagcctgcctctaagaaggaacggatagctgatgtgaagaagatgtgg
gaagaatatcctgatgtttatggggttaggaggtcaaatcggagcagacaagaaccatca
cgatttaatattaaggaagaggcaagtagcgggtctgagagtgggagtccgaaaagaaga
ggccagaggcagctgaaaaaacaagaaaaatggaagcaggacccctcagaagacgatcag
gaacagggaagcagtgcagagagtgaggcagagcaaaagaaagtaaaagctagaagaccc
atccctagaagaacagtgcccaaacctcaagttaaaaagcaacctaagattcagcgtgga
aagaggaaaaaacaagagtcttcagatgatgatgacgacgatgatgaagctcccaaaagg
cagactcgacgaagagctgctaaaaatgtgagttacaaagaagatgatgactttgagact
gattcagatgatctcattgaaatgactggagaaggagttgatgaacagcaagataatagt
gaaactattgaaaaggtcttagattcaagactgggaaagaaaggagttgacttgaatcct
tttgcagccactggagcgtctaccactgtgtatgctgttgaagctaatggagatcctagc
ggtgactttgacacggagagggaagaaggtgaaatccaataccttatcaagtggaagggc
tggtcgtatattcacagcacgtgggagagtgaagaatccttacaacaacagaaagtaaag
ggcctaaaaaaactggagaatttcaagaagaaagaggacgagattaagcaatggttaggg
aaagtttctcctgaagatgttgaatatttcaattgccaacaggagctggcatcagagttg
aataaacagtatcagatagtagaaagagtaatagctgtgaagacaagtaaatctgcactg
ggccaaacagattttccagctcacagtcggaagccagcaccttcaaatgagcctgaatat
ctgtgcaagtggatgggactgccctactcagagtgcagctgggaagatgaagccttgatt
ggaaagaaattccagagttgtatcgacagcttccacagtcgaaacaactctaaaaccatt
cccacaagagaatgcaaggcactaaagcaaagaccacggtttgtagctttgaagaagcaa
ccagcatacttaggaggagagaatctggagctccgagactatcagctggagggtctcaac
tggcttgctcactcctggtgcaaaagtaacagcgtaatccttgctgatgaaatgggccta
ggaaagaccatccagaccatatcgtttctctcctacctgttccatcagcaccagctctac
gggccctttctcatagttgtccccttatccacccttacctcatggcagagagagtttgag
atctgggcaccggaggttaacgtcgtggtttacataggtgacctgatgagcaggaacacg
ataagggaatatgagtggattcattctcaaaccaaaaggttgaagttcaatgcacttata
acaacatatgagatcctattaaaagataagacggtgctgggaagtattaactgggccttc
ctgggagtagatgaagcccatcggttgaagaatgatgactctttgttgtataaaactctg
attgatttcaagtccaaccataggctactgatcacgggcacccctcttcagaattccctc
aaggaactttggtccttgctgcactttattatgccggagaagtttgagttctgggaagat
tttgaagaagaccatggaaaggggagagagaatggctaccagagtcttcataaggtacta
gagccttttcttcttcgaagagtcaaaaaagatgtggagaaatcccttcctgccaaagtg
gaacagattctcagggtggagatgtcagcccttcagaaacagtattataaatggatcctg
accaggaattacaaggctcttgccaaaggaacgagaggcagcacgtccggcttccttaat
attgtgatggagctgaagaagtgctgcaaccactgctacctgatcagagctcccgaggac
agcgaaagggagacgggccaggaggtccttcagtctctaattaggagcagtgggaagctg
attctgttagacaaactgttgacaagactccgagaaaggggaaacagagtccttatcttc
tctcagatggtgaggatgttggatatcctggctgagtacctgactatcaaacattatcct
ttccagcgcctggatggttctatcaagggagaaatccgaaaacaggcattggatcacttc
aatgcagatgggtctgaggacttctgcttcctgctctccacacgggctggcggcctggga
atcaacttggcttcagcggacacagttgtcatctttgactctgactggaacccccagaac
gacctgcaggcacaagcccgagcacatagaatcggtcagaagaagcaggtgaatatttac
cgcctggttacgaaggggactgtggaagaggaaatcatagaaagggccaaaaagaagatg
gtgttggaccatctggtgattcagcgcatggatactactggcaggacagttcttgaaaac
aactcagggagatccaactcaaatccttttaataaagaagagctgacagctattttgaaa
tttggagcagaggatctcttcaaagaaattgaaggagaggagtcagagcctcaggaaatg
gatatagatgaaattttgcgtttagctgaaaccagagagaatgaagtgtcaactagtgcg
acagatgagctgctatcacagtttaaggttgccaactttgcaacaatggaagatgaagag
gagctagaagagcgtcctcacaaggactgggatgaaatcattcccgaagagcagaggaaa
aaagtggaggaggaagagcggcagaaggagctggaagaaatttatatgctgcctcggatt
cgcagttctactaaaaaggctcagaccaatgacagtgattctgacactgagtctaagagg
caggcccagaggtcttcagcttctgagagtgagacggatgactctgacgatgataagaag
ccaaagcgcagagggcgcccccggagtgtgcgcaaagacctcgtggaaggcttcacggat
gccgagatcagaaggtttatcaaggcttataagaagtttggtctccctcttgaaaggcta
gagtgcatagcacgtgatgctgagctagttgataagtccgtggcagacctgaaacgccta
ggggagctggttcataatagctgtgtgtcagcaatgcaggagtatgaggaacagctgaaa
gaaaatgccagcgaaggaaaaggaccaggcaagagaagaggcccgacaatcaagatctct
ggggttcaggttaatgtgaagtccattatccaacatgaagaagagtttgagatgctgcat
aaatctatccctgtggaccctgaggaaaaaaaaaaatactgcttaacctgccgagtcaaa
gcagcacattttgacgtcgagtggggcgtggaggatgattctcgtctgttgcttggaatc
tatgaacatggctatggaaattgggagctaattaagacagaccctgagctaaagctaact
gataaaattctaccagtggagacagataagaagcctcagggaaagcagctgcagacccga
gtggactacttgctgaaactgctcaggaagggtctggagaagaagggcaccgtgaccagc
ggggaagaggccaaattaaagaagcggaagcctcgagtaaagaaggagaacaaagcaccc
aggctgaaggatgagcatgggctggagctttcgtctcctcgacactctgacaacccctct
gaggaaggggaagtgaaggatgatggtttagaaaaaagtccaacgaaaaaaaagcagaag
aagaaagagaacaaagagaacaaagagaaaccagtgagttctcggaaggacagagaagga
gacaaagaaaagaagaagtccaaggacaagaaagaaaaggttaaaggtggtgatgccaag
tcttcaagtaaatcaaagcgatctcagggtcctgtccacattacagcaggaagtgagcct
gttcccattggggaggatgaagatgatgatctggaccaggaaaccttcagcatttgtaag
gagaggatgaggcctgtgaagaaggcactgaaacagttggacaaacccgacaagggactc
aatgtgcaagaacagctggaacacaccaggagctgcctgctgaagattggagaccgcata
gctgagtgccttagagcttattcagagcaggagcacatcaaattgtggaggaggaaccta
tggatttttgtttccaagtttacagaatttgatgcacggaaactacataagttatataag
atggctcataagaaaagatctcaagaagaggaggaacaaaagaagaaagatgatacgctt
ggtggtaagaaaccatttcgaccagaggcctcgggctccagccgggactctctgatatct
cagtcccatgcctcacacaaccttcatcctcagaagcctcatttgcctgcctcccatggc
ccacagatgcatggacatccaagagatacctacagtcaccccaacaagagacactttagt
aatgcagatcgaggagactggcagagggaaagaaagttcaactatggcggcggtaataat
gccccctgggggggcgaccggcaccatcagtatgagcagcactggtataaggaccaccac
tatggtgaccggagacatatggatgcccaccgttctggaagctaccgacccaacaacatg
tccagaaagagaccatatgagcagtacaacagtgaccgagaccaccggggacacagagac
tattatgacaggcaccatcatgactccaagcggaggaggtcagatgactttaggccccag
aattaccaccagcaggatttccgacgaatgtctgaccacagacccaccatgggttaccat
ggccagggaccctcagaccattaccgctctttccacacagacaaattgggggaatacaaa
caacccatgcctacattgcacaccgcgctctcagaccctcgctccccccctgcccagaaa
tctccccatgattctaagtcacccttggatcacaggtctcctttggagagatcactagaa
cagaaaaacaacccagattataactggaatgttcggaagacataa
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integrated database retrieval system
