Rattus norvegicus (rat): 308790
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Entry
308790 CDS
T01003
Symbol
Mex3b
Name
(RefSeq) RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
308790 (Mex3b)
04121 Ubiquitin system [BR:
rno04121
]
308790 (Mex3b)
Enzymes [BR:
rno01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
308790 (Mex3b)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
308790 (Mex3b)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
308790 (Mex3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
RING_XB3-XBAT31
zf-C3HC4
KH_2
Prok-RING_4
KH_DEAH11_2nd
KH_PNO1_2nd
zf-RING_5
zf-P11
Motif
Other DBs
NCBI-GeneID:
308790
NCBI-ProteinID:
NP_001178555
RGD:
1306790
Ensembl:
ENSRNOG00000025142
UniProt:
D3ZFL6
LinkDB
All DBs
Position
1:146264319..146268554
Genome browser
AA seq
576 aa
AA seq
DB search
MPSSLFADLERNGSGGGGGGGGGGGGSGSGGGETLDDQRALQLALDQLSLLGLDSDEGAS
LYDSEPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVV
TGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQTTIQVRVPYRVVG
LVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIALRTGGII
ELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLG
SASTDSYFGGGTSGSTAATSRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGEASVPSPD
GGTELQPTFDPAPAPPPGTPLLWAQFERSPGGGSAAPVSSSCSSSASSSASSSSVVFPGG
GASSTPSNANLGLLVHRRLHPGTSCPRLSPPLHMATGAGEHHLARRVRSDPGGGGLAYAA
YANGLGTQLPGLPSSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSVCFESEVIAALVPC
GHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcgctgtttgcagacctggagcgcaacggcagcggcggcggcgggggaggc
ggcggcgggggaggcggcagtggcagcggcgggggagagactctggatgaccaaagagcc
ctgcagcttgcgctcgatcagctctccctgttgggactggacagtgatgagggcgcctct
ctgtacgacagcgaaccgcgcaagaagagcgtgaacatgaccgagtgcgtgccggtaccc
agttccgaacacgtcgcggagatcgtagggcggcaaggttgtaaaatcaaagctttgagg
gcgaagaccaacacttacatcaagaccccagttcgcggggaggagcctgtctttgttgtg
acgggcaggaaggaggatgtggctatggctcggagggagatcatctctgccgcagagcac
ttctccatgatccgagcctctcgtaacaagaacaccgctctcaacggcgctgtgcccggg
ccgcccaatctgccgggacagaccactatccaagtgagggtgccataccgcgtggtaggg
ctcgtggtggggccaaagggcgccacgatcaagcgcattcaacagcagacacatacatat
attgtgacacccagccgagacaaggagccggttttcgaggtgaccgggatgccagagaac
gtggatcgcgctagagaggagatcgaagctcacatcgcgctgcgcaccggtggcatcatc
gagctgacagatgagaacgacttccatgccaatggcacagacgtgggctttgatctgcat
cacgggtccggcgggtccgggccgggcagcctctggagcaaacccaccccaagcatcact
cctacccctggtcgcaagcccttctccagctatcgcaacgacagctccagctcgcttggc
agcgcatccacagactcttacttcggaggtgggaccagcggcagcacagcggccacttca
cgcctggcggactacagccctcccagccctgcactcagctttgcccacaatgggaacaac
aacaacaacggcaatggttacacctacacagcgggggaagcctcagtaccttccccggat
ggaggtactgagcttcagcctactttcgacccagctcctgccccaccacctgggacaccc
cttctctgggcccagttcgagcgttcgcctggaggtggatctgcagcaccagtatcctct
tcctgctcttcctcggcatcctcatctgcctcgtcgtcctctgtggtctttcccgggggt
ggcgccagcagcacaccctctaatgccaatctggggctgctggtgcaccgccgactacac
ccgggcaccagctgcccgcgcctgtctccacccttgcacatggccacgggggcgggagag
caccaccttgctcgccgcgtgcgcagcgacccaggcggtggaggcctggcctacgccgcc
tatgctaatgggctagggacgcagctccctggcctgccctcgtcggacacttcgggctcc
tcctcgtcctctagctcctcctccagctcttcctcctcttcctccgggctgaggcgcaaa
ggcagccgcgactgctctgtgtgcttcgagagcgaagtgatcgccgcgctggtgccctgt
ggccacaacctcttctgcatggagtgtgccaaccgcatttgtgagaagagcgagcccgag
tgtcccgtttgccacacggcggtcactcaggccatccgcatcttttcctga
DBGET
integrated database retrieval system
