Rattus norvegicus (rat): 308865
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Entry
308865 CDS
T01003
Symbol
Atg16l2
Name
(RefSeq) protein Atg16l2
KO
K20868
autophagy-related protein 16-2
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
308865 (Atg16l2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
308865 (Atg16l2)
03029 Mitochondrial biogenesis [BR:
rno03029
]
308865 (Atg16l2)
Membrane trafficking [BR:
rno04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
308865 (Atg16l2)
Others
Rab GTPases of specific organelles
Auto phagosome
308865 (Atg16l2)
Mitochondrial biogenesis [BR:
rno03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
308865 (Atg16l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
ANAPC4_WD40
TerY_C
IFT57
Motif
Other DBs
NCBI-GeneID:
308865
NCBI-ProteinID:
NP_001178489
RGD:
1311400
Ensembl:
ENSRNOG00000019413
LinkDB
All DBs
Position
1:complement(165100946..165123307)
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AA seq
623 aa
AA seq
DB search
MAGPSAPCDPCAPVAAWKRHILRQLRHRDRTQKALFLELVPAYNHLLEKAELLAKFSEKL
KSEPKDVISTPHQDSREEASGTGPDQVSSPASLKVKWQQEKKGLQLVCGEMAYQVVRKSA
ALNTLQSQLEERQGRLEALQACVVQLQEARAQQSRQLEERQAENSAQREAYETLREQAAH
QEAALRRLQEEARDLLEQLVQRKARAAAERNLRNERRERANQARVSQELKKAAKRTVSIS
EIPNTLEDGTKEETVALGPAAKPEFLESDSCEKWKRPYRSASATSLTLSRCVDVVKGLLD
FKKRRGHSVGGVSEQRYQSIPVCVSAQIPSQAQDVLDAHLSEVNAVCFAPNSSLLATGGA
DRLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGETQSKE
TLSGHKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLGRAYCSRTINVLSYCNDVVCGDHII
ISGHNDQKIRFWDSRGPHCIQVIPVQGRVTSLNLSHDQLHLLSCSRDNTLKVIDLRISNI
RQVFRADGFKCSSDWTKAVFSPDRSYALVGSSNGTLYIWDVNTGKLETSLQGPHCTAVNA
VAWCFSGNHVVSVDQVRKVVLWH
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgggacccagcgccccctgcgatccctgcgcgcccgttgccgcctggaagcgccac
atcctgcgacagctgcggcatcgggaccgcacgcaaaaggcgctcttcttggagctagtg
ccggcttataaccatctcttagagaaggctgaactgctagccaagttctcagaaaagctg
aagtcagaaccaaaggatgtcatctccaccccacatcaggactcgagggaggaggcctca
gggacaggccctgaccaagtctcatcaccagcctccctgaaggtgaagtggcagcaggag
aagaagggtctgcagctggtctgtggtgagatggcctaccaggtggtgaggaagagcgca
gccctaaacaccctgcagtcacagctagaggagcgtcagggcaggctggaagccctgcag
gcctgtgtggtgcagctacaggaggcgcgggctcagcagtcccggcagctggaggaacgg
caagcggagaactcggcacagagagaagcctacgagactctgcgcgagcaagctgcgcac
caggaagcggcactgcgcaggctccaggaagaggcacgcgacttgctggagcaacttgtg
cagcgtaaggcgcgcgccgccgccgagcgcaatctacgtaacgagcgtagagagagggcc
aatcaggctcgggtgtcccaggagctgaagaaagcggccaagcggactgtgagcatcagc
gagatcccaaacactctagaagatgggaccaaagaggagactgtggctctaggtcctgcc
gctaagcccgagttcctggagagtgacagttgtgaaaaatggaagaggccttataggtct
gcctcagccacctctctgacactgtcccgctgtgtggatgtggtgaaggggctgctggac
ttcaagaaaagaagaggtcactcggttgggggtgtctctgagcagcggtaccagagcatc
cctgtgtgtgtgtctgcccaaattccttcccaggctcaagatgtcttggatgcccatctc
tctgaggtcaatgctgtttgttttgcccccaatagcagcctcctggcaactggaggggca
gaccggcttatccatctctggaatgttgtaggcggtcgcctggaggccaaccaaaccctg
gaaggagctggtggcagcatcaccagtgtggattttgacccctcgggctcccaggttttg
gcggctacttacaaccaggctgcccagctctggaaggtgggagagacacaatccaaggaa
acattgtctggacacaaggacaaagtgacagctgccaaattcaagctaacaaggcaccag
gcagtgactgggagccgagaccggacagtgaaggagtgggacctgggccgcgcctactgt
tccaggaccatcaatgtactttcctactgcaatgacgtggtatgcggggaccacatcatc
atcagtggccacaatgaccagaagatccggttttgggacagcaggggcccacactgcatc
caggtcatccctgtacagggccgggttacctccctgaaccttagccatgaccagctgcat
ctgcttagctgttcccgagacaatacgctgaaggttatcgacctacgaatcagcaatatc
cgacaggtgttcagggcggatggcttcaagtgcagttctgattggaccaaagctgtgttt
agccccgacagaagctatgcactggtgggctcctcaaatggcaccctgtacatctgggat
gtgaacactgggaaactggagaccagcctacagggaccgcactgcactgctgtcaatgcc
gtggcttggtgcttctccgggaaccatgttgtgagtgtggaccaagtcaggaaggtggtg
ctctggcactag
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integrated database retrieval system