Rattus norvegicus (rat): 308968
Help
Entry
308968 CDS
T01003
Symbol
Rbbp6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
308968 (Rbbp6)
Enzymes [BR:
rno01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
308968 (Rbbp6)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
U-box type E3
308968 (Rbbp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
308968
NCBI-ProteinID:
NP_001414116
RGD:
1311964
Ensembl:
ENSRNOG00000012806
LinkDB
All DBs
Position
1:186934563..186966852
Genome browser
AA seq
1827 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADSDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTTKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKTLVGPPPPSYTCFRCGKPGHYIKNCPTNGD
KNFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAGRLLFHKLGTMGHK
QIDTYLWNRGDVYGAAATQITHLREAYAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLI
CKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDALIANKFLRQAVNN
FKNETGYTKRLRKQLPPPPPPISAPRPLIQRNLQPLMRSPISRQQDPLMIPVTSSSAHST
PSISSLTSNPSSLAPSVPGNPSSAPAPVPDITATVSISVHSEKSDGPFRDSDNKLLPAAA
LASEHSKGASSIAITALMEEKGYQVPVLGTPSLLGQSLLHGQLIPTTGPVRINAARPGGG
RPGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHSERSQRTQGPSLPATPVFVPVPP
PPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSVPPPGFPPAPANISTPWVSSGVQ
TAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRR
SFSRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKS
RNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRGQSPTKRNVPQGETEREYFNRYRE
VPPPYDIKAYYGRSVDFRDPFEKERYREWERKYREWYEKYYKGYAVGAQPRPSANREDFS
PERLLPLNIRNSPFTRGRREDYVAGQSHRNRNLGGNYPEKISTRDSHNPKDNPKSKEKES
ENVPGDGKGNKHKKHRKRRKGEESESFLNPELLETSRKSRESSGIDETKTDALFVLPSRD
DATPVRDEPMDAESITFKSVSEKDKREKDKPKVKSDKTKRKSDGSATAKKENVLKPSKGP
QDKVDGDREKSPRSEPPLKKAKEEATKVDSVKPSSSQKDEKVTGTPRKAHSKSAKEHQEA
KPVKEEKAKKDCSKDIKSEKPASKDEKAKKPEKNKLLESKGEKRKRKTEEKSVDFESSSM
KISKVEGTEIVKPSPKRKMEGDVEKLERTPEKDKSASSTTPAKKIKLNRETGKKIGNAEN
PSTTKEPSEKLESTSNKIKQEKVKGKARRKVAGTEGPSSTLVDYTSTSSTGGSPVRKSEE
KTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSKWDKDDFESEEEDDVRTTQPIQSVG
KPSSIIKNVTTKPSATVKCTEKENEQSEKIQKLTKEVSHEVIQHELRSSKGSVSSEKGRA
KDRDHSASEKDNPDKRKTSIQPDKESTVDRLSEQGHFKNLSQSSKETRTSEKHESVRGSS
NKDFTPGRDKKTDYDSRDYSSSKRRDERSELTRRKDSPPRSKDSLSGQKSKLREEKDLPK
KGTELKKSNSSPPRDKKPHDHKASYETKRSCEETKSVDKNAGKEREKHAAEASRNGKESS
GSKLPSIPNPPDPPMEKELAAGQIEKSTIKPKPQLSHSSRLSSDLTRETDEAAFEPDYNE
SDSESNVSVKEEEAVASVSKDLKEKATEKATESLNVATASQPGADRSQSQSSPSVSPSRS
HSPSGSQTRSHSSSASSAESQDSKKKKKKKDKKKHKKHKKHKKHKKHAGVDGDVEKSQKH
KHKKKKAKKNKDKEKEKDDQKVKSVTV
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcactataaattttcctctaaactcaactacgacaccgtcacctttgat
gggctccatatctccctctgcgacttaaagaagcagattatggggagagaaaagctgaaa
gctgccgatagcgatctgcagatcaccaacgcgcagacgaaagaagaatatactgatgat
aatgcactcattcctaaaaattcatctgtaattgtcagaagaattcctattggaggtgtt
aagtctacaagcaagacatatgttataagtcgaactgaaccagtgatgggaactacaaaa
gcaattgatgactcttctgcgtctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaggaagacaaaattaaagcaatgatgtcgcaatctggccat
gaatacgacccaatcaattacatgaagaaaactctagtaggcccgccacctccgtcttat
acctgttttcgttgtggtaaacctggtcattatattaagaattgcccaacaaacggggat
aagaactttgaatctggtcctaggatcaaaaagagcactggaattcctagaagttttatg
atggaagtgaaagatcctaacatgaaaggcgcaatgcttacgaacactggaaaatacgca
ataccgactatagacgctgggagactcctctttcacaaattgggaacaatggggcataag
caaattgatacttatttgtggaatcgtggtgatgtctatggagcagctgcaacacaaata
acacacctaagagaggcctatgcaattgggaagaaagagaaaccacccttcttaccagag
gagccatcgtcatcttcagaagaagatgatcctatcccagatgagctcttgtgcctcatc
tgcaaagacattatgactgatgccgttgtcattccctgctgtggaaacagttactgtgat
gagtgtataaggacagcactcctggagtcagatgagcatacatgtccaacatgtcatcaa
aatgatgtttctcctgatgctttaattgccaacaagtttttacgacaggctgttaataac
ttcaaaaatgaaactggctatacaaaaagactacgaaaacagttacctccacccccacct
ccaatatcagcgccaagaccactcattcagcggaacctgcaacctctgatgagatctccc
atatcaagacagcaggatcctctgatgattccagtgacatcttcctcagctcactcaact
ccctctatatcttcattaacttcaaatccatcctccttggctccttccgtgcctggcaac
ccatcttctgccccagctccagtgcctgatataactgcaacagtatctatatcagtccac
tcagaaaaatccgatgggccttttcgggattctgataataaactattaccagctgccgcc
cttgcatcagaacactcaaagggagcgtcctcaattgctattactgctcttatggaagaa
aagggttaccaggtgccagtccttgggactccatctttgttgggacagtcattattgcat
ggacagttaatacccacaactggtccagtaagaataaatgctgctcgtccaggtggtggt
cgaccaggttgggaacattccaacaaacttgggtacctggtttccccaccacagcaaatt
agaagaggagaaagaagctgttacagaagtataaaccgcgggcgacaccacagcgaacga
tcacagaggactcaaggcccatcactaccagcaactccagtctttgtgcctgtcccacca
cctcctttgtatccacctcctccccatacacttcctcttcctccaggtgtacctccccca
cagttttctcctcagtttcctcctggccagcctccaccagcaggatatagtgtccctcct
ccagggttcccgccagctcctgccaatatatcaacaccttgggtatcatcaggagtgcag
actgcccattcaaataccatccctacaacacaagcacctcctttgtccagggaagaattc
tatagagagcagcgacgactaaaggaagaggaaaagaaaaagtccaagctagatgagttt
acaaatgattttgctaaggaattgatggaatacaaaaagattcaaaaggagcgtaggcgc
tcattttccaggtctaaatctccctatagtgggtcatcgtattcaagaagttcatacact
tactcaaagtcaaggtctggctcaacacgttcacgctcttactctcggtccttcagccgc
tcacactctcgctcctattcacggtcacccccataccccaggagaggcagaggcaagagc
cgcaattaccgttcacggtccagatctcatggataccatcgatctaggtcaaggtcacct
ccctatagacgataccactcacggtcgagatctcctcaagcatttaggggacagtctccc
actaaacgcaatgtacctcaaggagaaacagagcgtgagtattttaatagatacagagaa
gttccacccccttatgatatcaaagcctattatgggcggagtgtcgactttagagaccca
tttgagaaagaacgctaccgggaatgggagaggaaataccgagagtggtatgagaagtac
tacaaagggtacgcagtgggagcccagcctagaccctcagccaacagagaggacttttct
ccagagagactcttacctcttaatatcagaaattcaccctttacaagagggcgcagagaa
gactatgttgctggacaaagtcatagaaatagaaatctaggtggcaactatccagaaaag
atttcgacaagagatagtcacaatccaaaagataatccaaagtcgaaagagaaggagagt
gaaaatgttccaggagacggcaaaggaaacaagcataagaaacacaggaaacgaagaaag
ggggaagagagtgagagcttcctgaacccagagctactggaaacttctagaaaatccagg
gaatcctcagggatcgatgaaacaaagacagatgcactgtttgttctcccaagcagagac
gatgctacacctgttagggatgaaccaatggatgcagaatctatcaccttcaaatcagta
tctgaaaaagacaagagagaaaaggataaaccaaaagtaaaaagtgacaagaccaaacgg
aaaagtgatgggtctgctacagccaagaaagaaaatgttttaaaaccttctaaaggaccc
caagacaaggtagatggagaccgtgaaaaatctcctcggtctgaacctcctctcaaaaaa
gccaaagaggaggctacaaaggtcgactctgtaaaaccttcctcatctcagaaggatgag
aaggtcactggaacccctagaaaagcccactccaaatctgcaaaagaacaccaggaggca
aagccagtcaaagaggagaaggcaaaaaaggactgttccaaagacatcaagtcagaaaag
ccagccagtaaggacgagaaggccaagaagcctgagaaaaataaactacttgaaagcaag
ggagagaaacgaaagagaaaaaccgaagagaagagtgtagattttgagtcctcttcaatg
aaaatctctaaagtggaaggaacagaaatagtgaaaccatcaccaaagcggaaaatggaa
ggtgatgttgaaaagctggaaaggaccccagaaaaggacaagagtgcatcatcaactacc
ccagccaaaaaaattaaactcaatagagaaactggaaaaaaaattggaaatgcagaaaat
ccatctactacaaaagaaccctctgaaaaactggagtcaacatctaacaaaatcaaacag
gaaaaagtcaagggaaaggccagacggaaagtagctgggacagaaggccccagctccacg
cttgtggactacaccagtacaagctcaactggaggcagtcctgtgaggaaatctgaagaa
aagacagatacaaagagaacagtcattaaaactatggaggaatataataatgataataca
gcgcctgcagaagatgttataattatgattcaggttcctcagtccaaatgggataaagat
gactttgaatctgaagaagaagatgatgttagaaccacacagcctatacagagtgtaggg
aaaccatccagtattataaaaaatgtcactactaagccatcagctacagttaagtgcact
gagaaagaaaatgagcagtctgagaaaattcagaagcttaccaaggaggtcagccatgag
gtgatacagcatgagctcaggagctcaaagggctctgtgtccagtgagaaggggagagcc
aaggaccgggatcactcagcgtcagagaaggacaaccctgacaagaggaagaccagtatc
cagccagacaaggagagcactgtggaccgcctgagtgagcaaggacattttaagaatctc
tctcagtcttccaaagagaccaggacttcagagaagcatgagtctgttcgtggctcctca
aataaagacttcactcctggtagagacaagaaaacggactacgacagcagagattattcc
agttccaaacgaagagacgaaagaagtgaattaacaagaagaaaagactctcctcctcgg
agtaaagattctttatctggacagaaaagtaagctgagggaggagaaagatttacctaaa
aaggggacagagttaaaaaaaagtaattctagtcccccaagagacaaaaagcctcatgat
cataaagcctcctatgaaaccaaacgctcatgtgaagagacaaagtctgtagataaaaat
gctgggaaggaacgggagaagcatgctgctgaagcttctcgaaacgggaaagagtccagt
ggcagcaagttgccatctatacccaacccgcctgaccctcccatggaaaaggagctggct
gccgggcagattgagaagagcaccatcaagccaaaaccccagttgagtcattcctcaagg
ctttcctctgatctcactagagagactgatgaggctgcttttgaacccgactataacgag
agcgatagtgagagtaatgtgtctgtgaaggaggaagaagctgttgccagtgtctccaag
gacttgaaagagaaagcaacagagaaagcaacagagagcttgaatgtagcaacagccagc
cagccaggtgcagacaggagccagagccaaagtagccccagtgttagtccaagtagaagt
catagcccttccggcagccagacccggagccacagcagcagtgccagctcggcagaaagc
caagacagcaaaaagaagaaaaagaagaaagacaagaaaaagcacaagaagcataaaaag
cacaagaagcacaagaagcatgcaggcgtggacggtgatgtggagaagagccagaaacat
aaacacaagaagaagaaggcgaagaaaaacaaagacaaggagaaggagaaagatgaccaa
aaagtgaaatctgtcactgtgtga
DBGET
integrated database retrieval system
