Rattus norvegicus (rat): 309016
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Entry
309016 CDS
T01003
Symbol
Wdr11
Name
(RefSeq) WD repeat-containing protein 11 isoform X1
KO
K24260
WD repeat-containing protein 11
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
309016 (Wdr11)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rno03037
]
309016 (Wdr11)
Membrane trafficking [BR:
rno04131
]
Endosome - Lysosome transport
Others
Others
309016 (Wdr11)
Cilium and associated proteins [BR:
rno03037
]
Other cilia and associated proteins
Other cilium assembly proteins
309016 (Wdr11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
RAB3GAP2_N
Rrn6_beta-prop
WDR54
Motif
Other DBs
NCBI-GeneID:
309016
NCBI-ProteinID:
XP_006230486
RGD:
1587347
Ensembl:
ENSRNOG00000020430
UniProt:
D3Z9L5
LinkDB
All DBs
Position
1:193595606..193641149
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AA seq
1224 aa
AA seq
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MLPYTVNFKVSARTLTGALNAHNKAAVDWGWQGLIAYGCHSLVVVIDSNTAQTLQVLEKH
KADIVKVKWARENYHHNIGSPYCLRLASADVNGKIIVWDVAAGVAQCEIQEHVKPIQDVQ
WLWNQDASRDLLLAIHPPNYIVLWNADTGTKLWKKSYADNILSFSFDPFDPSHLTLLTSE
GIVFISDFSPSKAPSGPGKKVYISSPHCSPAHNKLAAATGAKRALNKVKVLVTQEKPSAE
FVALNDCLQLAYLPSKRSHMLLLYPREILILDLEVNQTVGVIAIERTGVPFLQVIPCSQR
DGLFCLHENGCITLRVRRSYSSICTTSSDEPDLDPVQELTYDLRSQCDAIRVTKTVRPFS
MVCCPVNENAAALIVSDGRVMIWELKSAVCSRNARNSSSAVSPLYSPVSFCGIPGGVLQN
KLPDLSLDNMIGQSAIAGEEHPKGSILQEVHLKFLLTGLLSGLPSPQFAIRMCPPLTTKN
IKMYQPLLAVGTSNGSVLVYHLTSGLLHKELSVHSCEVKGIEWTSLTSFLSFAASTPNNM
GLVRNELQLVDLPTGRSTAFRGDRGNDESPIEMIKVSHLKQYLAVVFKDKPLELWDIRTC
TLLREMSKSFPAITALEWSPSHNLKSLRKKQLATREAMARQTVVSDAELGAVESSVISLL
QEAESKSELSQNISAREHFVFTDNDGQVYHLTVEGNSVKDSARIPPDGSMGSITCIAWKG
DTLVLGDMDGNLNFWDLKGRVSRGIPTHRSWVRKIRFAPGKGNQKLIAMYTDGAEVWDTK
EVQMVSSLRSGRNVTFRILDVDWCTSDKVILASDDGCIRVLEMSMKSTCFRMDEQELVEP
VWCPYLLVPRAALALKAFLLHQPWNGRYSLDISHIDYPENEEIKTLLQEQLHALSNDIKK
LLLDPEFTLLQRCLLVSRLYGDESELHFWTVAAHYLHSLSQAKSGDTVVTKDGAPKDKLN
NPLDICYDVLCENAYFQKFQLERVNLQEVKRSTYDHTRKCTDQLLLLGQTDRAVQLLLET
SADNQHYYCDSLKACLVTTVTSSGPSQSTIKLVATNMIANGKLAEGVQLLCLIDKAADAC
RYLQTYGEWNRAAWLAKVRLNSEECADVLKRWADHLCSPQVNQKSKALLVLLSLGCFVSV
AETLHSMRYFDRAALFVEACLKYGAFGVSEDTEKLITAIYTDYARSLKSLGFKQGAVHFA
SKAGAAGRDLLNELGSPKEEATEG
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgttaccctacaccgtgaacttcaaagtgtcagcgcgcaccctcaccggggctctcaac
gcgcacaacaaggcggcggtggactggggctggcaaggtttaattgcgtatggatgccat
tcgcttgtggtagtgatcgattccaatactgcccaaactctgcaagttctagaaaaacat
aaagctgacattgttaaggtcaagtgggccagggagaactatcaccacaacatcgggtct
ccatactgcctgcgcttggcttctgctgatgtcaatgggaagatcattgtttgggatgta
gcagcgggagtagctcagtgtgagatccaagagcatgtcaagcccatccaagatgtgcag
tggctgtggaatcaggatgcctcccgagatttactgcttgctatccacccgccaaattac
atcgtgctttggaatgcagacactggcaccaaactctggaagaagagctatgcagataac
atcctttctttttcttttgacccttttgatccttcacatttaactttactcaccagcgag
ggcattgttttcatctcggacttctctccatccaaggctccctccggccctgggaaaaaa
gtgtacatctccagcccacactgcagcccagctcataacaagctggccgcagccacagga
gccaagagggctcttaataaagtaaaggttttagtcacgcaggagaaacctagtgctgaa
tttgtagctctcaatgactgcctccagttagcctatctgccttcaaaaaggagtcacatg
ctgttgctctaccctcgggagattttaatccttgaccttgaagtgaatcaaacagttggc
gtgattgcaattgagcgaacaggcgttccctttctgcaggtaataccgtgctctcagcgc
gatggcctgttttgcctacatgaaaatggctgcataaccttacgtgtccggaggtcttat
agcagcatctgcaccacttcaagtgatgaaccagatctagatcctgttcaggagcttacc
tatgacctgagaagccagtgtgatgcaatcagggtgacgaaaactgtccgtcccttcagt
atggtgtgctgtcctgttaatgagaatgcagctgccctcatagtaagtgacggcagagtc
atgatatgggaactcaagtctgctgtgtgcagtcgaaatgcacggaacagtagttctgct
gtgtcccctttatactcgcccgtgtccttctgtgggatccctggaggagtgctgcagaat
aaactcccagacctctccctagataatatgattgggcaaagtgcaattgctggggaagag
catcccaaaggctccattctgcaggaagtgcacctcaaattcctgctgacgggactgctc
tcaggactcccctcccctcagtttgccatccggatgtgcccaccactgaccacaaaaaac
attaagatgtatcagccactccttgctgttggtacaagtaacggttctgtcctggtgtac
cacctcaccagtggtctgctacacaaggagctaagcgtccactcgtgtgaagtcaagggt
attgaatggacaagcttgaccagtttcctttcttttgctgcttcaaccccaaacaacatg
gggttagtaagaaacgaacttcagctggttgatctcccaacagggaggagcactgcgttc
cgtggtgaccggggcaatgatgaatcacccattgaaatgatcaaagtgtctcatttgaaa
cagtatttggcagttgttttcaaagataagcccctggaattgtgggatattagaacctgt
actcttctcagagaaatgtctaagagcttccctgctataactgccttggaatggtcaccg
tctcacaacctgaagagcctgagaaagaagcagctagccacccgggaggccatggcccgc
cagactgtggtctcggatgcagagctgggtgccgttgaatcatctgtgatcagtttatta
caggaggcagaaagtaagtctgaactcagtcagaacatctccgctcgggaacattttgtg
ttcactgacaacgatggccaagtttatcatctcactgtcgaaggaaattctgtgaaagac
agtgctcggattccaccggatggtagcatgggcagcattacctgcatcgcttggaaaggg
gatacattagtgcttggagatatggatggaaatttaaacttctgggatttgaaaggcaga
gtatccagaggaatacccacacacagaagttgggtgaggaagattcgttttgcccccggc
aagggaaaccagaagctaatagcaatgtataccgatggcgctgaagtgtgggataccaaa
gaggttcagatggtgagcagtttaagaagtggaagaaatgtgacctttcggattttggat
gtggactggtgcacgtcagacaaggtgatcttggcatctgatgacgggtgcatccgagtc
ctggagatgtccatgaagtctacgtgtttcaggatggatgagcaggagttagtagagcca
gtgtggtgcccatacctccttgttccaagggccgcccttgccttgaaagccttcctacta
caccagccttggaatggaagatattctctggacatttctcacattgattatccagaaaat
gaagaaataaagactctccttcaggaacagttgcatgcattgtctaacgacataaagaaa
ctcctgcttgatcctgaattcactctcctgcagaggtgtctgctcgtttccaggctttac
ggtgatgagtcagagctgcacttctggacagtggcggcccactacctgcacagcctgtcc
caagccaagtctggggacacagtggtaacaaaggacggtgctcctaaggacaagctgaat
aatcctctggacatctgctacgatgtgctctgtgaaaacgcctacttccagaaatttcag
ctagaaagagttaatctacaggaagtaaaacggtcaacttatgatcacacaaggaaatgc
actgaccagctcctgctgttgggccagacagacagggccgtgcagctgctgctggagaca
agtgcagataaccagcactactactgtgactcgctgaaagcttgcttggtcaccaccgtc
acctcctcaggcccttctcagagcacaattaagctggtagcaaccaatatgatcgccaat
ggcaagctggcagagggcgttcagttactctgcctgatagacaaggctgcagacgcctgt
cgctacctgcagacgtatggcgagtggaaccgggcagcatggcttgcaaaggttcggttg
aattctgaagagtgtgcggatgttctgaagcggtgggctgaccacctttgttctccacaa
gtcaaccagaagtccaaggccctcctggtcctcctctctctgggttgctttgtcagcgtg
gcagagacacttcacagtatgagatacttcgatagagctgccttgtttgtggaagcctgc
ctcaagtatggtgcatttggagtcagtgaggacacagagaagctcatcactgccatctat
acagactatgcccgaagcctgaagagcctcggctttaaacagggagcagtgcattttgct
tcaaaagctggagcggccggcagagatttattgaatgagcttgggtcccccaaggaagaa
gcaacagaaggttga
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