Rattus norvegicus (rat): 309139
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Entry
309139 CDS
T01003
Symbol
Tpcn2
Name
(RefSeq) two pore channel protein 2
KO
K14077
two pore calcium channel protein 2
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04020
Calcium signaling pathway
rno04142
Lysosome biogenesis
rno04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
309139 (Tpcn2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
309139 (Tpcn2)
09150 Organismal Systems
09154 Digestive system
04972 Pancreatic secretion
309139 (Tpcn2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rno04040
]
309139 (Tpcn2)
Ion channels [BR:
rno04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
309139 (Tpcn2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
DUF8173
Motif
Other DBs
NCBI-GeneID:
309139
NCBI-ProteinID:
NP_001386374
RGD:
1311779
Ensembl:
ENSRNOG00000013387
LinkDB
All DBs
Position
1:complement(209845827..209875561)
Genome browser
AA seq
733 aa
AA seq
DB search
MAAEAQPLLGRDRGGGQAHSGADQELCIDQAVVFIEDAIKYRSIYHRLDAGSLWLYRWYY
SNVCQRVLGFTIFLILALAFVEVPSSFTRTADVRYRSQPWQPPCGLTETIEALCLLVFLA
DLSVKGYLVGQAQLQQNLWLLAYFVVLVVSVVDWIVSLSLNCEESLRVRRLLRPFFLLQN
SSMMKKTLKCIRWSLPEMASVGLLLTIHLCLFTVIGMLLFTIAEKDEAQNKERLTYFRNL
PEALTSLLVLLTTSNNPDVMIPAYTQNRAYALFFIIFTLIGSLFLMNLLTAIIYNQFRGY
LMKSLQTSLFRRRLGARAAYEVLTLQAGPNGTTSELVGVNPENFLRVLQKTQLNKIHKQA
IIQKVHSYEGRPILADEFQKLFDEVDKGIVKERPPKPQYQSPFLQTAQFIFSHRYFDYLG
NLIALGNLLSICVFLVLDSNLLPGERNDFVLGILNYIFILYYLLELLFKVFALGLRGYLF
YHSNVFDGLLTIILLVLEISTLAVYRLPHPGWKPEQYGPLSLWDMTRLVNILIVIRFLRI
IPSIKPTAVVASTILGLIQNLRAFGGILVVVYYVFAMIGINLFRGVIVPPGNSSLVPDNS
SAPCGSFEQLGYWPNNFDDFAAALITLWDVMVVNNWQVILEAYKHYSGPWSMVYFVLWWL
VSSVIWINLFLALLLENFLHRWDPQGHKQLLVGTKQITYEMSVELMFRDILEEPKEEELM
EKLHKHPHLHLCR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagaagcgcagccccttctgggccgggaccgaggtggtggccaggcccactct
ggcgctgatcaggagctctgcatagaccaggctgtggtcttcattgaagatgccataaag
taccgatccatctaccaccgcctggacgctggctcactgtggctttaccgctggtattac
tcgaacgtgtgccaacgagtgctgggcttcaccattttcctgatcctggccttggctttt
gtggaggtcccatcttccttcacaaggactgcggatgtgcgctaccgctcccagccctgg
cagccaccctgtggcctgacagagacaattgaggcgctctgcttgctggtcttcctggct
gacctctctgtgaagggctacctggtggggcaggcccagttgcagcagaacctgtggctg
ctggcttactttgtggtgctggttgtgtctgtggtggactggatcgtttcgctgagcctc
aactgtgaggagtctctgcgggtgcgccggctactccgacccttcttcctgctgcagaat
tcctccatgatgaagaagaccctgaaatgtatacggtggtcactaccagaaatggctagt
gttgggctgctgctgactatccacctgtgtctcttcaccgtaatcgggatgctgctgttc
accattgctgagaaggatgaagcacagaacaaggagaggctgacctacttccggaacctt
ccagaagcactgacctcactcctagtgctgctgactacttccaacaaccctgatgtgatg
atccctgcgtatacccagaaccgggcctatgctctcttcttcataatcttcaccttgata
ggaagcttgtttctgatgaacctgctgacggccatcatctataatcagttccgaggctac
ctaatgaaatctctacagacttcactgttccggcggcgactaggggcccgtgcggcctat
gaagtcctcacccttcaggcagggccaaatggaaccacctctgagttagtcggggtaaat
cccgagaacttcctgcgagtgcttcagaaaacccagctgaacaaaatccacaaacaagcc
atcatacagaaggtgcactcctatgaaggccgcccgatcctggccgatgagttccagaaa
ctctttgatgaggttgacaaaggtatagtcaaagagcgcccgccgaagccccagtaccag
tctccgtttctgcagactgcccagttcatcttcagccaccgctactttgactacctgggg
aacctcattgctctgggaaacctcttgtctatttgtgtgttcctggtgctggactcaaac
ctgctgcctggggaacggaacgactttgtcctggggattctcaactacattttcatcttg
tactacctgctggagctgctgttcaaggtgttcgcgctgggcctacggggctacctgttc
taccacagcaacgtgttcgatggcctcctgaccatcatcctgctggttttggagatttct
actctggccgtgtaccgattgccgcacccaggatggaagccagagcagtatggccccctg
tcgctttgggacatgactcggctggtgaacattctgattgtgatacgcttcctgcgcatc
atccccagcataaagccaacggctgtggtagccagcaccatcctgggcctaatccagaac
ctgcgggcatttggtgggatcctggtggtggtatactatgtgttcgccatgattgggatc
aacctgttccgaggtgtcattgtgcctcccggaaacagcagcctggttcctgataacagc
tcagctccgtgtggaagctttgagcagctaggttactggcccaacaacttcgacgacttt
gctgctgctctgatcacactgtgggacgtgatggtggtgaacaattggcaggtgatcctg
gaagcctataagcactactccggcccgtggtcgatggtgtattttgtgctgtggtggttg
gtgtcctctgtcatctggatcaacctgtttctggctctgcttctggagaactttctccac
agatgggaccctcaaggtcataagcagctcctggttgggaccaagcagatcacctacgag
atgtctgtggagctcatgttcagagatatcctagaagagcccaaggaggaggaactgatg
gagaagctacacaagcatccacacttgcatctgtgcaggtga
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