Rattus norvegicus (rat): 309194
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Entry
309194 CDS
T01003
Symbol
Taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
309194 (Taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rno03021
]
309194 (Taf6l)
03036 Chromosome and associated proteins [BR:
rno03036
]
309194 (Taf6l)
Transcription machinery [BR:
rno03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
309194 (Taf6l)
Coactivators
SAGA/TFTC/STAGA complex
309194 (Taf6l)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
309194 (Taf6l)
STAGA complex
309194 (Taf6l)
TFTC complex
309194 (Taf6l)
SAGA complex
309194 (Taf6l)
SLIK complex
309194 (Taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
309194
NCBI-ProteinID:
NP_001101045
RGD:
1310123
Ensembl:
ENSRNOG00000019419
UniProt:
A0A9K3Y8B8
B5DF37
LinkDB
All DBs
Position
1:complement(215101266..215113888)
Genome browser
AA seq
623 aa
AA seq
DB search
MHSSTGAMSEREERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQ
FMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEVLPLRPAREGELYFPEDREVNLVELA
LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSSLTDDLLKYYQQVTRAVLGDDP
QLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLIRNPHLCLGP
YVRSLVGSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSL
QKVLTDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLPTYWTNLQAVLDDYSVSNAQVKA
DGHKVYGAILVAVERLLKMKAQAAEPNRGGLGGRGYRPAEDLPWDSLLLQESPPGGGSEP
GFGSGLLLPSGVAGSEDPSSLTLADIYRELYSFFGDSLATRFGTGQPAPTAPRPPGDKKE
PATTPDSVRKMPQLTASAVVSPQGDESPCGGTLAAANATSESRPLPRVHRARGAPRQQGP
GAGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPSPASRYVQKLP
MIGRTGRPARRWALSDYSLYLPL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcacagttccactggagccatgtcagaaagagaagagaggcggtttgtggagatccct
cgggagtcagtccggctcatggcagagagcaccgggctggagctgagtgacgaagtggcc
gctctgcttgctgaagatgtgtgctaccgtctcagagaggccacccagaacagctctcag
ttcatgaaacacaccaaacgaaggaagctgacagtggaggacttcaacagggctctcagg
tggagcagtgtggaggctgtgtgtggctatgggtcccaggaggtgttgcccttgcgccct
gcaagggagggggaactctactttccagaggatcgagaagtgaacctggtggagctggca
ctggccactaacatccccaagggctgtgcagagacagccgtcagagttcatgtctcctat
ctggatggcaagggaaatctggcacctcagggatcagtgcccagtgcagtgtcttcactg
acagatgacctgctcaaatactaccagcaagtgacacgggctgtgctgggcgatgatcca
cagctgatgaaggttgccctccaggacctgcagacaaactccaagattgcagcactcctg
ccttactttgtttatgtggtcagtggggtaaaatctgtaagccacgacctggagcagctg
caccgactactgcaggtagcacggagcctgatacggaacccacacctctgcttggggccc
tatgtccgatctctggtgggcagcgtgctttactgtgtcttggagccactggctgcctcc
atcaaccctttgaatgaccactggactctgcgagatggggctgccctcctactcagccac
atcttctggactcatggagaccttgtaagtggcctctatcagcagattctgctctccctg
cagaaggtcctgacagaccctgtacggcctctctgttctcactatggggcagtggtaggg
ctgcatgctctaggctggaaggcagtggagcgagtcctctacccacatctgcctacttac
tggacaaacttgcaggctgtgctggatgactattccgtatctaatgcccaggtcaaagca
gatgggcacaaagtatatggagctattctggtagccgtagagcgactacttaagatgaaa
gcccaggcagcagaacccaaccgcggtggccttggcgggagagggtaccgtcctgcggag
gacctgccttgggacagccttctcttacaagagtctccccctgggggcggttccgaacca
ggttttgggtctggcctcctgctgccgtcaggggttgcgggatcagaggatccttcttcc
ttgaccctagcagacatctaccgtgaactatactccttctttggtgacagcctggccacc
cgcttcggcactggccagcctgctcccacggccccacgaccgcccggagacaagaaggag
cctgcaactaccccggattcagtgcggaaaatgccgcagctgactgccagcgccgtggtc
agccctcagggtgacgaaagcccatgcggtggaaccctcgccgccgccaacgccacctcg
gagagcaggccgctacctcgtgtacaccgggcgcgaggcgctcctcgtcagcagggtccc
ggcgcgggaacgcgagacgtcttccagaagagccgcttcgcgccccgcggcgcccctcac
ttccggtttataatcgcagggcgtcaggccgggcggcgctgccgcgggcgcctctttcaa
actgctttccctgcaccgtatgggcccagtcccgcgtcccgctacgtgcagaagttgccc
atgatcggccgtactggccgcccggcccgccgctgggcgctctcagactattcgctgtac
ctgccgctatga
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integrated database retrieval system
