Rattus norvegicus (rat): 309458 Help Entry 309458            CDS       T01003                                  Symbol Pdcd11 Name (RefSeq) protein RRP5 homolog   KO K14792   rRNA biogenesis protein RRP5 Organism rno  Rattus norvegicus (rat) Brite KEGG Orthology (KO) [BR:rno00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:rno03009]     309458 (Pdcd11) Ribosome biogenesis [BR:rno03009]  Eukaryotic type   90S particles    Other 90S particles     309458 (Pdcd11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  S1_RRP5 S1 HAT_PRP39_C HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_Syf1_CNRKL1_C OB_RRP5_4th OB_RRP5 Suf Spt6_S1 TPR_14 TPR_19 ARM_TT21 UTP6_C TPR_15 TPR_6 ARM_TT21_5th DUF7017 DUF2110 NRDE-2 Motif Other DBs NCBI-GeneID:  309458 NCBI-ProteinID:  NP_001101074 RGD:  1304933 Ensembl:  ENSRNOG00000020304 LinkDB All DBs Position 1:255922198..255963336 Genome browser AA seq 1876 aa AA seqDB search MANLEESFPRGGTRKPHKSEKSSQPVVEQDNLFDISTEEGSVKRKKSQKGPAKTKKLKIE KRKSNKSMKEKFEILSLESLCEGMRILGCVKEVNELELVVSLPNGLQGFVQVTEICDAYT QKLNEQVAQEEPLEDLLRLPELFSPGMLVRCVVSSLDVTESGKKSVKLSVNPKRVNKVLS AEALRPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLSLQKAQEYIRQKNKGAKFKVGQYLT CVVEELKSNGGVVSLSVEHSQVSSAFATEEQSWNLNNLLPGLVVRAQVQKVTQFGLQLNF LTFFTGLVDFMHLEPKKMGSYSSKQTVKACILCVHPRTRVVRLSLRPIFLHPGRPLTRIS YQQLGTVLDDASVEGFFEKAGAIFRLRDGVLAYARLSHLSDSKKAFSAEAFKLGSTHRCR IIDYSQMDELALLSLRKSIIAAPFLRYQDIKTGTIVKGKVLALKPFGMLVKVGEQMRGLV PSMHLADIMMKNPEKKFNTGDEVKCRVLLCDPEAKKLIMTLKKTLVTSKLPAITCYEDAK PGLQTHGVIIRVKDYGCLVKFYNDVQGLVPKHELSAQHIPDPERVFYTGQVVKVAVLNCE PSKERMLLSFKLLSGSEPKDESVKNSKKKGSTVNTGQLVDVKVLEKTKNGLEVAILPHNI PAFLPTPHLSDHVANGPLLHHWLQTGDTLHRVLCLSQSEKHILLCRKPALVSTVEGGQDP KSLSEIQPGMLLIGFVKSIKDYGVFVQFPSGLSGLSPKTIMSDKFVTTPSEHFVEGQTVV AKVTNVDESKQRMLLSLRLSDCSLGDSASTSFLLLCQCLEELQGIRSLMSNQDSVLIQTL ADMTPGMVLDAMVQEVLENGSVVFGGGPVPDLILRASRYHRAGQELEPGQKKKVVVLHVD ALKLEVHVSLHQDLVNRKARKLRKNSRHQGIVQHLEESFAVASLVETGHLVAFSLISHLN DTFHFDSEKLRVGQGVCLTLKTTEPGVTGLILAVEGPASKRIRMPAQRDSETVDDKGEEE EEEEEEDLTVRSKKSHSLAIGDKVTGTIKSVKATHAVVTLDDGFIGCIHVSRILDDVPEG VSPTTTLKAGKKVTARVIGGRDVKTSKFLPISHPRFVLTILELSVRPSELKGDYRALNTH SVSPMEKIRQYQAGQTVTCFLKKYNVMKKWLEVDIEPDIRGRIPLLLTSLSFKVLKHPDK KFQIGQAIKATVVGPDIPRAFLCLSLIGPYKLEEGDVAMGRVLKVLPNKGLTVSFPFGRI GKVSVFHLSDSYSEEPLTDFCPQKIVRCYILSTAHRMLALSLRSSRTNKETKSKIEDPEV NSIEDIQAGQLLRGYVKSILPSSVVIGLGPSVMGLVKHSHVSQCVSREKELYDKCLPEGK LVTARVLCVNPKKNLIELSLLPSDTGKPDVFSASPEPPLPKQEGREGGTEKGLKGESKRS QRRREKNQKMREESGLYSQEKKEPRKSQRGGQSKRERQESESEQELVNKRPKKSGAPEDD DSGVEVYYREGEDEVEEPKVPPGGKQSKPTEVPRLQLSKGFIWDVGLDSLTPALPLRGES SDSEEDEQPHQAKKKKGKKERELEKQKAEKELSRIEEALMDPGRQPESADDFDRLVLSSP NSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQES LAKVFERAVQYNEPLKVFLHLADIYTKSEKFKEAGELYNRMLKRFRQEKAVWIKYGAFVL GRSQAGASHRVLQRALECLPTKEHVDVIVKFAQLEFQLGDVERAKAIFENTLTTYPKRTD VWSVYIDMTIKHGSQKEVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKA KALEYVEAKSSALEDQ NT seq 5631 nt NT seq  +upstreamnt  +downstreamnt atggcaaacctggaggaaagcttcccccgagggggtacacggaaaccccacaaatcagag aaatcgtcccagccggtggttgaacaagacaacttatttgacatttccacagaagaaggt tccgttaaaaggaaaaagagccagaaagggccagcaaaaacaaaaaagttgaaaattgag aagagaaaatccaataagtctatgaaagagaagtttgaaattcttagtcttgagtcctta tgtgaggggatgcgaattttggggtgtgtgaaagaggtgaatgagctggagctcgtggtc agtcttcccaatggcctccaagggtttgtgcaagtgaccgaaatctgtgatgcctacacg cagaagctgaacgagcaggtggcacaagaggagcctctggaggacctactccgcttgcct gagctcttctcacctggaatgctagtgaggtgtgtggtgagcagcctggatgtcacagag agtggcaagaagagcgttaagctttccgtgaaccccaaacgtgtcaacaaagtgctgagt gccgaggccctgaggcctggcatgctgctgacaggtacagtgtccagcctggaagaccat ggctacctagtggacattggggttgatgggaccagagcttttctgtcactacaaaaggca caagaatacattcgacagaagaacaaaggtgctaagttcaaagtcggccaatacctgacc tgtgtggttgaagagctgaaaagcaacggaggagttgtgagtctctctgtagaacactcc caggtttcttctgcctttgcaaccgaggagcagagctggaacctgaataacttactgcca gggctggtggtcagggcccaggtgcagaaggtgactcagtttggactccagctaaatttc cttacgttcttcacgggtctggttgacttcatgcacttggagcccaagaaaatggggtct tattcttcaaagcaaacagtaaaggcctgcatcctctgtgtccatcctcgtaccagagtt gtgcgactgagcctgcggcccatcttcctgcatcctggacgtccactcacccgcatctct taccagcagctagggactgtgctggacgatgcttctgttgagggttttttcgagaaggct ggggccatcttcaggctgagggatggggtactggcctatgcccggctcagccatctctct gattctaagaaggcattcagtgctgaggccttcaaactggggagcactcacagatgcaga atcattgactacagccaaatggatgagctggccctgctgtctctgcggaaatcaattatt gcagctccgtttcttagatatcaggacatcaagacagggacaatagtaaagggcaaggtg ctggctttgaagccatttgggatgctggtgaaggtgggtgagcaaatgagaggcctggta ccctccatgcacctggctgacatcatgatgaagaacccagagaagaagttcaacacaggg gacgaggtcaagtgcagggttttgctctgtgatcctgaagccaagaagctaataatgacc ctgaagaaaacccttgtcacatccaaactacctgccattacctgctatgaggatgccaag cctggcctacagacacatggtgttatcataagggtcaaggactatggctgccttgtgaag ttctacaatgatgtgcaggggctagtgcccaagcacgagctcagtgcccagcacatccct gacccagagagggtcttttacactggccaggtggtcaaggtggcagtgctgaactgtgag ccttccaaagagaggatgctcctgtcctttaaactgttgagtggttcggagccaaaggac gagagtgttaagaacagtaagaagaaaggaagcaccgtgaacactgggcagttggtggat gtgaaggttctggagaagaccaaaaatgggctggaggtggccatcctgccccacaacatc cctgcattcctcccgacgcctcacttgtctgaccatgttgccaatggcccgttgttgcat cactggctccagacaggtgacacccttcaccgagttctgtgtctgagccagagcgagaaa cacattcttctctgcaggaagccagctttggtctccacagtagaaggtggccaggacccc aagagcctctcggaaatccagcccggaatgctgctcattggttttgtgaagagcattaag gactatggagtgttcgtccagttcccctcaggtcttagtggactgtcccccaaaactatc atgagtgacaagttcgtaaccacgccaagtgaacactttgtggagggtcagacagtcgtt gctaaggtgaccaatgtggatgagtcgaagcaaaggatgttgctgtctctgcggctgtca gactgcagtctgggggactcggccagcaccagcttcctcctcctgtgccagtgcctggaa gagctgcagggcattcgaagccttatgagcaaccaagactcggtattgatccagacactg gctgacatgaccccagggatggtccttgatgccatggtacaagaggtgttggaaaatggt tcagtggtgttcggcgggggccctgtgcctgacctgatcctgagagccagcagataccac cgggcagggcaggagctggagcctgggcagaagaagaaagtcgtggttctgcatgtggac gcgttgaagttggaggtccatgtttcccttcaccaggacttggtgaataggaaagctaga aagctgagaaaaaacagcagacaccagggaattgtacagcatctggaagagtccttcgct gtggcctccttggtagagactggccaccttgtggctttctctctgatctctcacctcaac gataccttccactttgactctgagaagctacgtgtggggcagggtgtctgcctcaccctc aagaccacagaaccaggagtgactggtctgattttggctgtggaaggaccagcttctaag agaatcaggatgccagctcagagggattcagagacagttgatgacaaaggggaggaagag gaggaggaagaggaggaggacttgactgtgaggtctaagaagagtcatagcctggctatt ggggacaaagtcaccgggaccattaagtctgtgaaagccacacatgctgttgtgacccta gatgatggcttcattggttgtatccatgtatcccgcattctagatgatgtcccagagggc gtctctcctacgaccacactgaaagctgggaagaaagtcactgcgagagtgatcggtggg cgagatgtgaagacatctaagtttcttccaataagtcaccccagatttgttctgaccatc ctggagctgagtgttcggccaagtgagttgaagggtgactacagggctcttaatactcac tctgtgagccccatggagaagattaggcagtaccaggctggccagactgtgacttgcttc ttaaagaagtacaatgtgatgaagaagtggcttgaagtggacattgaaccagacatccga gggagaattcccttgttgctcacttcgctcagcttcaaggttctgaaacacccagacaag aagttccagattgggcaggccatcaaggccactgttgtcggcccagacattcccagggct ttcttatgtctgtcactcataggtccttacaaacttgaggaaggtgacgtggccatgggc cgagtgctaaaggtgttgcccaacaagggactgactgtctccttcccctttgggaggata gggaaagtcagtgtgtttcatttgagtgactcctactccgaggagcccctgacagacttc tgcccccagaagattgtccgatgttatatcctgtcaacagcacaccgtatgctggccctg tcactgcgatcatccaggacaaacaaagagacaaaaagtaaaatagaagacccagaagtg aactccatcgaggacatccaggcagggcagctccttcggggctatgtgaagtccatcctg ccgagtagtgtggtcataggccttggaccttcagttatgggtctggtcaagcactcacat gtctctcagtgtgtctcacgtgagaaagagctttacgacaaatgcctccccgagggaaag ctggtcactgccagggtcctatgtgtgaaccccaagaagaacctgatagagctgtcgctc cttcccagcgacactgggaagccggatgtgttctctgcttccccagaaccacctcttcct aaacaagaggggagagaaggtgggactgagaagggcctgaaaggagaatcgaagaggagt cagagaaggagagagaagaaccagaagatgcgagaagagtctgggctgtacagccaggag aagaaagaaccccggaagtcacagaggggtgggcagagcaagcgggagcgccaggagtct gagagcgagcaggaactagtgaacaagaggccaaagaagtctggggcaccagaagatgac gacagtggtgtggaagtgtactaccgggaaggagaggatgaggtggaggagccaaaggtg cctcccgggggaaaacagagcaaacccacagaggtgccccggctgcagctctctaaaggc ttcatctgggacgtggggctcgactctctgactccagccctgccactccgaggagagagc tcagacagcgaggaggatgagcagccacaccaagccaagaagaagaagggcaagaaggaa agggagctggagaagcagaaggcagagaaggagctgtcacgcattgaggaggcactcatg gaccccgggcgacagccagaatccgcggacgactttgacaggctggtgctgagctccccc aacagctccatcctttggctgcagtacatggctttccacctccaggccaccgagattgag aaggcccgggctgtagctgagagggccctgaagaccatctcgttcagagaggagcaggaa aagctgaacgtgtgggtggctctgctgaacctagaaaacatgtacggctctcaggagtcg ctggccaaggtcttcgagcgagctgtgcagtacaatgagcctctcaaggtcttcctgcac ctggctgacatctacaccaagtccgagaagttcaaggaagctggtgagctgtacaaccgg atgctgaaacgattccggcaggagaaggctgtctggatcaaatatggtgcctttgttttg gggaggagtcaggccggggccagtcaccgcgtgctgcagcgagccctggagtgcctgccc accaaggaacatgtggatgtgattgtcaagtttgcccagctagagttccagctcggggat gtggagcgggctaaagccatttttgaaaacacactgaccacctacccaaaacgcacagat gtctggtcagtctacatcgacatgaccatcaagcacggcagccagaaagaagtcagggac atctttgagcgggtcattcatctgagcctggcccccaagaggatgaagttcttcttcaag cgctacctggactacgagaagcagcatggcaccgaaaaggacgtgcaggctgtcaaggcg aaggccttggagtatgtggaggccaagagctcggcgctggaggaccagtag

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