Rattus norvegicus (rat): 309499
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Entry
309499 CDS
T01003
Symbol
Myof
Name
(RefSeq) myoferlin
KO
K22125
myoferlin
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
309499 (Myof)
Membrane trafficking [BR:
rno04131
]
Endosome - Lysosome transport
Others
Ferlins
309499 (Myof)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
PI3K_C2
Pex24p
Motif
Other DBs
NCBI-GeneID:
309499
NCBI-ProteinID:
NP_001341044
RGD:
1564216
Ensembl:
ENSRNOG00000016117
LinkDB
All DBs
Position
1:complement(245086109..245234768)
Genome browser
AA seq
2048 aa
AA seq
DB search
MLRVIVESATNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLD
SSSSLVIVVKDFETIGQNKLIGTATVSLKDLIGDQNRSLPYKQISLLNEKGQDTGATIDL
VIGYTPPSAPYPNDPSGTSVTGVGEEEEEDQGDEDRVDGMVRGPGPKGPSGTMSEAQLAR
RITKGKSSRRMLSNKPQDFQIRVRVIEGRQLCGNNIRPVVKVHVCGQTHRTRIKRGNNPF
FDELFFYNVHITPSELMDEIISIRVYNSHSLRADSLMGEFKIDVGFVYDEPGHAVMRKWL
LLNDPEDTSSGAKGYMKVSMFVLGTGDEPPSEKRDRDNDSDDVESNLLLPAGIALRWVTF
LLKIYRAEDIPQMDDAFSQTVKEIFGGNADKKNLVDPFVEVSFAGKKVCTNIIERNANPE
WNQVVNLQIKFPSMCEKIKLTVYDWDRLTKNDVVGTTYLYLSKIAASGGEVEANTGETEV
GFVPTFGPCYLNLYGSPREYTGFPDPYDELNSGKGEGVAYRGRILVELNTFLEKKPPEKK
LEPISNDDLLVVEKYQRRRKYSLSAVFHSATMLQDVGEAIQFEVSIGNYGNKFDATCKPL
ASTTQYSRAVFDGNYYYYLPWARTKPVVTLTSYWEDISHRLDAVNTLLVMAERLQSNIEA
VKSGIQGKIPTNQLAELWLKLIDEVIEDTRYTLPVTEGKANVTVLDTQIRKLRLRFLSQI
HEAALRMRSEATDVKSTLLEIEEWLDKLMQLTEEPQNSMPDIIIWMIRGEKRLAYARIPA
HQVLYSTSGGNASGKYCGKTQTILLKYPQEKNNGPKVPVELRVNIWLGLSAVEKKFNSFA
EGTFTVFAEMYENQALVFGKWGTSGLVGRHKFSDVTGKIKLKREFFLPPKGWEWEGDWVV
DPERSLLTEADAGHTEFTDEVYQNETRYPGGEWKQAEDTYTDANGDKAASPNEMTCPPGW
EWEDDAWTYDINRAVDEKGWEYGITIPPDNKPKSWVAAEKMYHTHRRRRLVRKRKKDLTQ
TASSTARAMEELEDREGWEYASLIGWKFHWKQRSSDTFRRRRWRRKMAPSETHGAAAIFK
LEGALGADTTEDGDEKSLEKQKHSATTVFGANTPIVSCNFDRVYIYHLRCYIYQARNLMA
LDKDSFSDPYAHVSFLHRSKTTEIIHSTLNPTWDQTIIFDDVEIFGEPQTVLQNPPKVII
ELFDSDQVGKDEFLGRSICSPLVKLNSETDTTPKLLWHPVMNGDKACGDVLVTAELILRN
KDGSNLPILPSQRAPNLYMVPQGIRPVVQLTAIEILAWGLRNMKNYQMASITSPSLVVEC
GGERVESVVIKSLKKTPNFPSSVLFMKVFLPKEELYMPPLVIKVIDHRQFGRKPVVGQCT
IDHLDRFRCDPYAGKEDIVPQLKASLMSAPPCRDVIIEIEDTKPLLASKLSEKEEEIVDW
WSKFYASSGEHEKCGQYIQKGYSKLKIYDCELEDVADFEGLTDFSDTFKLYRGKSDENED
PSVVGEFKGSFRIYPLPDDPSVPAPPRQFRELPDSVPQECTVRIYIVQGLQLQPQDNNGL
CDPYIKITLGKKVIEDRDHYIPNTINPVFGRMYELSCYLPQEKDLKISVYDYDTFTRDEK
VGETTIDLENRFLSRFGSHCGIPEQYCVSGVNTWRDQLRPTQLLQNVARFKGFPPPVLSE
DGSRIQYGGRDYHLDEFEANKILHQHLGAPEERLALHILRTQGLVPEHVETRTLHSTFQP
NISQGKLQMWVDVFPKSLGPPGPPFNITPRKAKTYYLRVIIWNTRDVILDEKSITGEDMS
DIYVKGWISGSEENKQKTDVHYRSLDGEGNFNWRFVFPFDYLPAEQLCIVAKKEHFWSID
QTEFRVPPRLIIQIWDNDKFSLDDYLGFLELDLHRTIIPAKTSEKCSLDMIPDLKAMDPL
KAKTASLFEQKSMKGWWPCYADKDGSRVMAGKVEMTLEVLNEREADERPAGKGRSEPNMN
PKLDPPNRPETSFLWFTNPCKTMRFIVWRRFKWVIIGLLLLLILLLFVAVLLYSLPNYLS
MKIVRPNA
NT seq
6147 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgagtgattgtggaatctgctactaacatccctaaaacgaaatttgggaaaccg
gatcctatcgtttctgtcatttttaaggatgagaaaaagaaaacaaagaaagttgataat
gaactcaaccctgtctggaatgagattttggaatttgacttgagggggataccactggac
tcttcatcttccctggtgattgttgtcaaagattttgagacgattggacaaaataaatta
attggcacagcaactgtgtccctgaaggacctgatcggggaccagaacagatctctgccc
tacaaacagatctccctgctaaacgagaagggacaagacacgggggccaccattgacctg
gtgattggctataccccaccttcagctccatatccaaatgatccgagtgggaccagtgtg
acaggcgtgggagaagaagaggaagaagaccagggggatgaagacagggtagatggcatg
gtcagaggccctggacccaaggggccatctgggacaatgtcagaagctcagcttgctcgg
aggatcaccaaagggaagagcagccggaggatgctgtccaacaagccacaggatttccag
atccgtgtcagagtgattgaaggccgtcagttatgcggcaacaacataaggcctgtggtg
aaagttcacgtctgtggtcagacacaccgcacgagaatcaagagagggaacaatccattt
tttgatgagttatttttctacaatgtgcacatcacaccctctgaactcatggatgagatc
atcagcatccgggtttataattcccactctctgagggcagatagtctgatgggggaattt
aagattgatgttggatttgtttacgatgaacctggccatgctgtcatgaggaaatggctc
cttctcaatgacccagaagacaccagctcaggtgcaaaggggtacatgaaagtcagcatg
tttgtcctgggaaccggagacgaacccccatctgagaaacgagaccgggacaatgacagt
gatgacgtcgagagcaacttgttacttccagctggcattgccctccggtgggtaaccttc
ttgctgaagatctaccgagctgaggacatcccccagatggatgatgccttctcacagaca
gtgaaggaaatatttggtggcaatgctgataaaaaaaatctcgtggaccctttcgtagag
gtctcctttgctgggaaaaaggtgtgtacaaatattattgagagaaatgcaaaccccgaa
tggaatcaagttgtcaatcttcagatcaagtttccttccatgtgtgaaaaaataaaacta
acagtgtatgactgggaccggcttaccaaaaatgatgtagttgggacgacatacctgtac
ctctctaaaattgctgcctctgggggagaagtggaagcaaatacaggagagactgaggtg
ggtttcgtcccaacatttggaccttgttatttgaacctttatggaagccccagagagtac
acaggatttccagatccctacgatgagctgaattcaggaaagggagaaggggtggcctac
agaggcaggatcttggttgaactgaacacgttccttgaaaagaaaccaccagaaaagaag
cttgagcccatttcaaatgatgaccttctggttgttgagaaataccagcgacggcggaag
tacagcctgtcggccgtgttccattcagccaccatgttgcaagatgttggcgaggccatt
cagtttgaagtcagcattgggaactatggcaacaagtttgatgcaacctgtaaacctctg
gcatcaacaactcaatacagccgtgcagtatttgatgggaactactattactatttacct
tgggcccgcacaaagcctgttgtcaccctgacttcctactgggaggatattagtcatcgc
ctggatgcagtgaacactctcctagtcatggcagaacggctgcaatcaaacatcgaggct
gtaaaatcaggaatccaaggtaaaattcccacaaaccagttggcagagctgtggctgaag
ctaatagacgaagttatagaagacacaagatacaccttgcctgtcactgaaggaaaagcc
aacgtcacagttctggatactcagatccgaaagttgcggctgaggtttctctcgcagata
cacgaggcggctctgaggatgagatctgaagccacggatgtgaaatccaccttgctggag
atcgaggagtggcttgataaattaatgcaacttactgaagagcctcagaacagtatgccc
gacatcatcatctggatgatccgcggggagaaaagactggcttatgcacggattcctgcc
caccaagtcttatactccaccagtggtgggaacgcctccggaaaatactgtgggaaaacc
caaaccatccttctgaagtatccacaagaaaagaacaatgggcccaaagtgcctgtggaa
ttgcgagtgaacatctggctgggtttaagcgccgtggaaaagaagttcaatagcttcgct
gaaggcacattcaccgtctttgctgaaatgtatgaaaaccaagccctcgtgtttgggaag
tggggcacctctggactggtgggacgccataaattctctgatgtcacaggaaaaataaaa
ctcaaaagagaattctttttacctcccaaaggctgggaatgggaaggagactgggtagtt
gaccctgaacgaagcctcctgactgaggctgatgcaggtcacacagagttcactgatgaa
gtgtaccagaacgagactcgctatcctggaggcgagtggaagcaggcagaggacacctat
accgatgcgaatggagataaagcagcatcacccaatgagatgacttgccctccgggttgg
gagtgggaagatgacgcatggacatatgacataaatcgagcagtggacgagaaaggctgg
gagtatggaattaccattcctcctgacaataagcccaaatcctgggtcgcagcagagaag
atgtatcacactcacaggcggcggagactggtccgaaagcgcaagaaagatttgacacag
acggcttccagcactgcgagggccatggaagaacttgaagaccgggagggctgggaatac
gcctcgttaattggctggaaattccactggaaacagcgcagttcagatacctttcgccgc
aggcgctggaggagaaaaatggctccttcagagacacatggcgcagcggccatctttaaa
cttgaaggtgcccttggggcagacaccacagaggatggagatgaaaagagcctagagaag
cagaagcacagtgccaccactgtgtttggagcaaacacacccattgtttcctgtaatttc
gacagagtctacatctaccacctacgctgctacatttatcaagcccggaacctcatggct
ttggacaaagacagcttttcagacccgtatgctcatgtctccttcctccatcgaagcaaa
accactgagatcattcactccaccctgaatcccacctgggaccaaaccattatatttgat
gacgttgaaatctttggggagccccaaacagttctgcagaacccgcccaaagtcatcatc
gaactttttgacagtgaccaagtgggcaaagatgagtttttaggtcgaagcatttgctct
cctctggtgaaactgaactcagaaacagacaccacacctaagcttctctggcacccagtt
atgaatggagataaggcctgtggggatgtccttgtaacagcagaactgattctgaggaac
aaggacggctccaaccttcccatcctcccctctcaaagagcaccaaacttatacatggtc
cctcaagggatcagacctgtggttcagctcaccgctattgagatcctagcttggggctta
agaaatatgaaaaactaccagatggcttccatcacctcgcccagcctcgtggtggagtgc
ggaggagagagagtagaatcggtggtgatcaaaagcctcaagaagacacccaacttccca
agttctgttctcttcatgaaagtgttcttgcccaaggaagaattgtacatgccaccactg
gtgatcaaggtcattgatcacaggcagttcgggcggaagcctgtggtcggccaatgcacc
attgaccacctggaccgctttcggtgtgatccatatgcaggaaaggaggacattgtaccg
caactaaaagcttcccttatgtctgcacccccatgccgggatgtcattattgaaatagaa
gacaccaaaccattgctggcttctaagctgtcagaaaaggaggaagaaatcgttgactgg
tggagtaaattttatgcttcctcgggggagcatgaaaaatgtggacagtatattcagaaa
ggctattccaaactcaagatctatgactgtgaactggaggacgtagctgactttgaaggc
ctgacagatttctcagataccttcaagttgtacagaggcaagtccgatgagaatgaagat
ccgtccgtggtaggagagtttaaaggctccttccgaatctaccccttgccggatgacccc
agtgtgccggcccctcccaggcagtttcgggaactgcctgacagtgtcccgcaggaatgc
acggttaggatttacattgttcaaggcttacagctccagccccaggacaacaatggcctg
tgtgatccttacataaaaataaccctgggcaaaaaagtaattgaagacagagaccattac
attcccaacactatcaacccagtgttcggcagaatgtatgaactgagctgctacttacct
caagagaaagacctgaagatctctgtctatgactacgacaccttcacccgagatgagaag
gtgggagagacaaccattgacctggagaaccgcttcctgtcccggttcgggtctcactgc
ggcatccctgagcagtactgtgtttctggagtgaacacctggcgagatcagctgagaccg
acacagttgcttcaaaacgtagccagattcaaaggcttcccgccaccagtcctttctgaa
gatggaagcaggatccaatatggaggaagagactatcatctggatgagtttgaggccaac
aaaatcctgcaccagcaccttggagcccctgaagagcgtcttgccctccatattctcagg
actcagggcctggtccctgagcacgtggagacaaggactttgcacagcaccttccagccc
aatatttcccagggaaaacttcagatgtgggtggatgtcttccccaagagtctaggacca
ccaggtccccctttcaacatcactcccaggaaagccaagacgtactatctgcgtgtcatc
atctggaataccagggacgttatcttggatgagaagagcatcactggggaggacatgagc
gacatctacgtcaaaggctggatttccggcagcgaagaaaacaaacagaaaacagatgtc
cactacaggtccttggatggcgaaggcaattttaactggagatttgttttcccatttgac
tacctccccgctgagcagctctgtatcgtcgctaaaaaagagcatttctggagtattgat
caaacagaattccgagtgccccctcggctgatcattcagatatgggacaatgacaagttt
tccctggacgactacttgggttttctggaactcgacttgcatcgtacgatcatcccagcc
aagacctcggagaaatgcagtttggacatgattccagacctcaaagccatggaccctctt
aaggctaagactgcttctctctttgaacagaagtccatgaaaggctggtggccatgctac
gcagacaaagatggctcccgcgtgatggctgggaaagtggagatgacactggaggtcctc
aacgagagggaggccgacgagaggccagccgggaaagggcggagtgaacccaacatgaac
cccaagcttgacccaccaaaccgaccggaaacctccttcctctggttcacgaacccttgc
aagaccatgcgcttcatcgtgtggcgccggttcaagtgggtgatcatcggcctgcttctg
ctgctcatcctgctgctgttcgtggctgtgctcctgtactcgctgccgaactatttatcc
atgaagattgtgaggccaaatgcatga
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integrated database retrieval system
