Rattus norvegicus (rat): 309533
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Entry
309533 CDS
T01003
Symbol
Sorcs1
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 precursor
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
309533 (Sorcs1)
Membrane trafficking [BR:
rno04131
]
Protein recycling
Others
Others
309533 (Sorcs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
309533
NCBI-ProteinID:
NP_001178492
RGD:
1305910
Ensembl:
ENSRNOG00000011313
UniProt:
F1LUZ4
LinkDB
All DBs
Position
1:complement(259022007..259535731)
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AA seq
1168 aa
AA seq
DB search
MGKVGAGDGSSAALSALLTGAGLLMLLAPGICSSLSCCPPQHPSSTPRWTLTPRGFSYPG
PLGRAPATPPPLFMRPLFAVAPGDRALFLERAGGSRVSVATASRSGRRRRSGMDPEKTEP
GEGTSRSRRDMLRDGGQQGPGTGARDPDKATRFRMEELRLTSTTFALTGDSAHNQAMVHW
SGHNSSVILILTKLYDYNLGSITESSLWRSTDYGTTYEKLNDKVGLKTILSYLYVCPTNK
RKIMLLTDPEIESSLLISSDEGATYQKYRLNFYIQSLLFHPKQEDWILAYSQDQKLYSSA
EFGRRWQLIQEAVVPNRFYWSVLGSNKEPDLVHLEARTVDGHSIYLTCRMQNCTEANRNK
PFPGYIDPDSLIVQDDYVFVQLTSGGRPHYYVSYRRNPFAQMKLPKYALPKDMHVISTDE
NQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVQSSRGPEGNVMIDLYEVAGIKGMFL
ANKKIDNQVKTFITYNKGRDWRLLQAPDADLRGDPVHCLLPYCSLHLHLKVSENPYTSGI
IASRDTAPSIIVASGNIGSELSDSDISMFVSSDAGNTWRQIFEEEHSILYLDQGGVLVAM
KHTSLPIRHLWLSFDEGRSWSKYSFTSIPLFVDGVLGEPGEETLIMTVFGHFSHRSEWQL
VKVDYKSIFDRRCAEEDYRPWQLHSQGEACIMGAKRIYKKRKSERKCMQGTYAGAMESEP
CVCTEADFDCDYGYERHSSGQCLPAFWFNPSSLSKDCSLGQSYLNSTGYRKVVSNNCTDG
VREQYTAKPQKCPGKAPRGLRIVTADGKLTAEQGHNVTLMVQLEEGDVQRTLIQVDFGDG
IAVSYVNLSSMEDGIKHVYQNVGIFRVTVQVDNSLGSDSAVLYLHVTCPLEHVHLSLPFV
TTKNKEVNATAVLWPSQVGTLTYVWWYGNNTEPLITLEGSISFKFTSEGMNTITVQVSAG
NAILQDTKTIAVYEEFRSLRLAFSPNLDDYNPDIPEWRRDISRVIKKSLVEATGIPSQHI
LVAVLPGLPTAAELFVLPYQDGARENKRSPEDLEQISEVLIHKLNQNLVHFELKPGVQVL
VHAAHLTAAPLVDLTPTHSGSAMLMLLSVVFVGLAVFVIYKFKRRVALTSPPSPSTQPGD
SSLRLQRPRQATPPSSPKRGSAGAQFAI
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagttggcgccggggacggctcctcggccgcgcttagcgcgctcctaacggga
gccgggcttctgatgctcttagcccctggcatctgcagcagcctttcttgctgccctccg
caacaccctagctcgaccccacgctggacccttaccccaagaggcttttcttaccccgga
ccgctgggtcgggctcctgccacgcccccgcccctcttcatgagacccctgttcgcagtg
gcccccggggaccgggcgctgtttctggagcgagctgggggcagcagggtgtcagtggcg
accgcttcacgctctggccgtaggagacggagtggaatggatcctgagaagactgaaccc
ggagagggtacgagtcggagccgccgggacatgctaagggatggagggcagcaggggcct
gggactggcgcgcgggacccggacaaagccactcgcttccggatggaggagctgagattg
accagcaccacatttgcgctgactggagactcggcacacaaccaagctatggtccactgg
tctggccacaacagcagcgtgattctcattttgacaaagctctatgactataacctggga
agcatcactgagagctcgctttggaggtcaaccgattatgggacaacctacgagaagctg
aatgataaagtggggttgaagaccattttgagctatctctatgtgtgcccaaccaacaag
cgtaagattatgctactcacggacccggagattgagagcagtttgttgatcagctcagat
gaaggggcaacctatcaaaagtaccggctcaacttttacatccagagtttgcttttccat
ccgaagcaagaagactggatcctggcctacagtcaagaccaaaagttatacagctctgct
gagtttggcagaagatggcagcttatccaggaagcagtggtacccaataggttttactgg
tctgtgctggggtcgaacaaagaaccagaccttgtgcatctcgaggccaggaccgtagat
ggtcactccatatacttaacttgtcggatgcaaaactgcactgaagccaacagaaataaa
cctttcccaggatacattgacccggattctttgattgttcaggatgattatgtgtttgtt
cagctcacatcaggaggaagaccacattactatgtgtcctaccgaagaaacccatttgca
caaatgaaacttccgaaatatgctttgcccaaggatatgcatgtcatcagtacggatgag
aatcaggtgtttgcagcagttcaagaatggaaccagaatgacacctacaacctgtacatc
tcagacacacgcggggtctacttcacgctggccttggagaacgtgcagagcagcagaggc
cctgaaggcaatgtcatgattgacctttatgaggtagcagggataaagggaatgttcttg
gctaacaagaagattgacaaccaagtgaagactttcatcacttacaacaaaggcagagac
tggcgtttgctgcaggctccagatgcagatctaaggggggaccctgtgcactgtttgctg
ccctactgttcactacaccttcatctcaaagtttctgagaatccctacacatctgggatc
attgccagcagagacacagccccaagtattatagttgcatcaggtaacataggctctgag
ttgtcagacagcgacatcagcatgtttgtatcatcagatgcagggaacacttggaggcag
atttttgaagaagagcacagcattttgtaccttgatcaagggggagtcctggttgctatg
aaacacacatctctcccaattcggcacctgtggttgagttttgatgaagggaggtcttgg
agcaaatacagttttacatccattccactttttgtggatggagtcctgggggagcctgga
gaagagacactaatcatgacagtgtttggacacttcagtcatcgttctgagtggcagctg
gtcaaagtggattacaagtccatttttgacagacgctgtgctgaagaagactacagaccc
tggcagttacatagccagggggaagcatgcatcatgggagccaagaggatctataagaag
cgaaaatctgagcgcaagtgtatgcaagggacgtatgcaggagcgatggagtctgagcct
tgtgtgtgtacagaggcggactttgactgtgactatggctacgagagacatagtagtgga
caatgcctaccagcattttggttcaacccgtcctcactgtcaaaagactgcagcttggga
cagagttacctcaacagcactgggtacaggaaggtggtctccaataactgcacggacgga
gtgagggaacagtacaccgccaaaccacagaagtgtccagggaaggcccctcgtgggcta
cggattgtcactgcagatgggaaactgacagcagaacaggggcacaatgtcactctcatg
gtgcagttggaagagggggatgtacagcggacactcatccaagtggactttggagatggc
attgcggtgtcttatgtcaacctcagctcgatggaagacggaatcaagcatgtatatcag
aatgtgggcattttccgagtgaccgtgcaggtggacaacagtctggggtctgacagcgcc
gtcctgtacttacatgtaacttgtcccctggaacatgtgcacctgtcccttccttttgtc
acaacaaagaacaaagaggtcaacgcaactgccgtgctgtggcccagccaagtgggcact
ctcacttacgtgtggtggtatgggaacaacacagagcccctgatcaccttggagggcagc
atatcattcaagtttacttctgaaggaatgaacactatcacggtacaggtctcagctggg
aatgccatactgcaagacactaagaccattgcggtatacgaggaattccgctctcttcgc
ttggctttttctccaaacttggatgactacaaccctgacatcccggagtggaggagggac
atcagccgagtaatcaaaaagtctctggtggaagccacagggattcccagccagcatatc
ctggtggcagtgttacctggcttacccactgctgctgagctctttgttttgccctatcaa
gatggagctagagaaaacaaaaggtccccagaggacctggagcagatatctgaagttcta
atccacaaactcaaccaaaacttggtgcactttgagctgaagcctggggtccaagttctt
gtccacgcagctcacctaacagcagcccccctggtggacctcactcctacccacagcgga
tctgccatgctgatgttgctctcagtggtgtttgtggggttggccgtgttcgtcatctac
aagtttaaaaggagagtagctttaacctcccctccctccccttctactcaacctggggac
tcatctctccgattgcaaagaccaagacaagccacaccaccttcatcgccaaagcgggga
tctgctggggcacaatttgcaatctaa
DBGET
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