Rattus norvegicus (rat): 309548
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Entry
309548 CDS
T01003
Symbol
Shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04014
Ras signaling pathway
rno04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
309548 (Shoc2)
09133 Signaling molecules and interaction
04519 Cadherin signaling
309548 (Shoc2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_9
LRR_At5g56370
LRR_5
LRR_13
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
309548
NCBI-ProteinID:
NP_001013173
RGD:
1308146
Ensembl:
ENSRNOG00000015339
UniProt:
Q6AYI5
A6JHX2
LinkDB
All DBs
Position
1:262964345..263052898
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AA seq
582 aa
AA seq
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MSSSLGKEKDSKEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKESSAA
QPGVAFSVDNTIKRPNPALGTRKKSSNAEVTKELNKCREENSMRLDLSKRSIHILPPSVK
ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLDSLTTLYLRFNRITAVEKDVRNLPRLSTLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIP
RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtagtttaggaaaagaaaaagactcgaaagagaaagatcccaaagtaccatct
gccaaggaaagagaaaaggaggcaaaagcctctggaggttttgggaaagaaagcaaagaa
aaagaacctaaaaccaaagggaaagatgccaaagatggaaagaaggagtccagtgctgcc
caacctggtgtggctttttcagtcgacaataccatcaaacggcctaatccagcacttggg
actagaaagaaatccagcaatgccgaggtaactaaggagcttaacaaatgccgggaggag
aactcaatgcgcttggacttatccaagcggtctatacatatactgccgccgtcagtcaaa
gagttgacacaactcacggaactttatttatacagtaacaaattgcagtccctcccagca
gaggtgggctgtctagtcaatcttatgacgctggctctcagtgagaattcactcaccagt
ttgcctgactctctcgataacttgaagaagctgcggatgcttgatttacggcataataaa
ctgagagaaatcccttcggtggtgtacaggctagactccctgactactctctaccttcgc
tttaaccgcataaccgctgtggagaaggacgtcagaaacctgccgaggctcagcacgctt
agcatccgagagaacaaaatcaagcagctccctgccgagatcggtgaactgtgtaacctc
attaccctggatgtagctcacaatcaacttgaacaccttccgaaggagattgggaactgc
acccagataaccaacctggacctgcagcacaatgagctgctagacctcccagacacaata
ggaaacctgtccagtttaaatcgccttggcctgaggtacaatagattgtcagcaataccc
agatcattagcaaaatgcagcgcacttgaggagctaaatctagagaacaataacatttct
actctgccagagagtcttttatccagtcttgtaaaattgaatagcttgaccttagctaga
aattgcttccagttgtacccagtgggaggcccatctcagttttccaccatttattccctc
aacatggaacacaatcgaatcaacaaaatcccatttggaattttttccagagctaaagtg
ctgagtaagctgaatatgaaggacaatcagttaacatcacttcctttggattttggaact
tggaccagtatggtagaattgaatttagcgaccaatcagctcacaaagatcccggaggac
gtgtctggtcttgtttctcttgaggttctaatattatcgaacaatcttctaaagaagctt
ccccatggtcttggaaaccttagaaagttacgagaattagacctggaggagaacaagctg
gagtccttgcccaatgagattgcttatcttaaggatttacagaaattagtcttgacaaac
aaccagttgaccactctccccagaggcatcggtcaccttaccaacctcacacaccttggt
ctcggagagaaccttctcactcaccttcctgaggaaattggtacactggaaaacctagag
gagctgtacttgaatgacaaccccaaccttcacagcctccccttcgagcttgccctctgc
agcaagctgtcaatcatgagtattgagaactgtccactcagtcacctcccacctcaaatt
gttgctggagggccttcattcattattcagttcttaaagatgcagggtccgtatcgtgcc
atggtctga
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