Rattus norvegicus (rat): 309728
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Entry
309728 CDS
T01003
Symbol
Arid5b
Name
(RefSeq) AT-rich interactive domain-containing protein 5B
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
309728 (Arid5b)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Helix-turn-helix
ARID
309728 (Arid5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
309728
NCBI-ProteinID:
NP_001101094
RGD:
1311735
Ensembl:
ENSRNOG00000000635
UniProt:
A6JKU7
LinkDB
All DBs
Position
20:20305693..20489689
Genome browser
AA seq
1184 aa
AA seq
DB search
MEPNSLQWVGSPCGLHGPYIFYKAFQFHLEGKPKILSLGDFFFVRCTPKDPICIAELQLL
WEERTSRQLLSSSKLYFLPEDTPQGRNSDHGEDEVIAVSEKVIVKLEDLVKWAHSDFSKW
RCGLRATPVKTEGFGRNGQKEALLRYRQSTLNSGLNFKDVLKEKADLGEDEEENNVIVLS
YPQYCRYRSMLKRIQDKPSSILTDQFALALGGIAVVSRNPQILYCRDTFDHPTLIENESV
CDEFAPNLKGRPRKKKTCPQRRDSFSGSKDPNNNCDGKVISKVKGEARSALTKPKNNHNN
CKKSSSEEKPKLSIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAA
QKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPP
IKPRKQENNAQENENKTKVSGNKRIKQEMAKNKKEKENTPKPQDPSEVSSEQRKEEETLS
QKSVPEPLPAPEVKKKPEGHKDLVVRAPVSRADPEKGNETDQGSNCEKEAEEVGDKGLAP
LLPSPPLPPEKGSAPTPGAGKQPLASPSAQMDSKQEAKPCCFPESPENDLQGAPFSSLPT
TEQPLAVQPEAEEEKLPAMANYIANCTVKVDQLGSDDIHTALKQTPKVLVVQSFDMFKDK
DLTGPMNENHGLNYTPLLYSRGNPGIMSPLAKKKLLSQVSGASLSSSYPYGSPPPLISKK
KLIARDDQSQAHHSQSSDHMAISRPSVIQHVQSFKNKASEDRKSINDIFKHDKLSRSDAH
RCGFSKHQLGSLADSYILKQEAQESKDKLLEKRAVSHAHVPSLLADFYSSPHLHSLYRHT
EHHLHNEQSAKYAARDVYQESENGAFLSHKHPEKIHVNYLASLHLQDKKLAAAEASTDEQ
PTDLSLPKNPHKLTSKVLGLAHSASGSQEIKGTSQFQVISSQSRDCHPKACRVSPMTMSA
PKKYPESLARSGKPHHVRLENFRKMEGMVHPILHRKMSPQNIGAARPIKRSLEDLDLVIA
GKKARAVSPLDPAKEASGKEKASEQESEGNKAAYSGHSGAASEGHKVPLSSPIFPGLYSG
SLCNSGLNSRLPAGYSHSLQYLKNQTVLSPLMQPLAFHSLVMQRGIFTSPTNSQQLYRHL
AAATPVGSSYGDLLHNSIYPLAAINPQAAFPSSQLSSVHPSTKL
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaactcactccagtgggtcggctcaccgtgtggcttacacggaccttatatt
ttctataaggcttttcaattccaccttgaaggaaaaccaaaaatcttgtcccttggcgac
tttttctttgtaagatgtacgccaaaggatccgatttgcatagcggagctccagctgttg
tgggaagaaaggaccagccggcaacttttatccagctcgaaactttatttccttcccgaa
gacactccccaaggccgaaatagcgaccatggcgaggacgaggtcatcgccgtctctgaa
aaggtgattgtaaagctcgaggacctcgtcaaatgggcgcattctgatttctccaagtgg
aggtgtgggctccgagccactccggtgaagaccgagggctttgggagaaatggccagaag
gaggctctgctcaggtacaggcagtcaacccttaacagtgggctcaacttcaaagacgtt
ctcaaggaaaaggctgatctcggggaagatgaggaagaaaacaacgtgattgtgctcagt
taccctcagtactgtcggtaccggtccatgcttaaacgcatccaggataagccatcgtcc
atcctcacggaccagttcgcgttagccctggggggcatcgcggtggtcagcagaaacccc
cagatcctgtactgccgggacacctttgatcaccccactctcatcgagaacgagagcgtg
tgtgatgagtttgcgccaaatctcaaaggcagaccacgcaaaaagaaaacatgtccccag
agaagagactccttcagtggctcaaaggaccccaacaataactgtgacggtaaagtcatc
agcaaggtgaaaggggaggccaggtcagccttgaccaagccgaaaaataaccacaataac
tgtaaaaaatcctcgagtgaagaaaagccaaagttgtccattggcgaagagtgcagggca
gatgaacaagccttcttagtggccctgtacaaatacatgaaagaaagaaaaacgcccatc
gagcgaattccctacttgggtttcaaacagattaacctttggactatgtttcaagctgct
caaaaactgggaggatatgaaacaataacagcccgccgtcagtggaaacacatttacgac
gagttaggcggtaatcctgggagcaccagtgcggccacttgtacccgcagacactacgaa
aggttaatcctgccgtatgaaagatttattaagggggaagaagataagcctctgcctcca
atcaaacctcggaaacaggaaaataatgcacaggaaaatgagaataaaacaaaagtctcg
ggaaacaaacgcatcaaacaggaaatggccaaaaacaagaaagaaaaagagaataccccc
aaaccccaagatccgtctgaggtctcatcagagcaaagaaaggaagaagaaacgttaagc
cagaaaagtgtcccagagcctctcccagctccagaagtaaagaagaaaccagaagggcac
aaggatcttgtagtgagggccccagtgtccagagcagacccagaaaagggcaatgaaact
gaccaaggttccaactgcgagaaagaagctgaggaggtgggagataagggccttgcccct
ctgctcccaagccctcccttgccccccgaaaaaggttcggctcctacccctggggctggc
aaacagccccttgcctctcccagtgcccaaatggactcaaagcaagaagccaaaccctgc
tgctttccagagagccctgagaatgacctccagggagcaccgttctccagcctccccacc
accgagcaaccactggccgtccagcctgaagccgaggaagagaagcttcctgccatggct
aattacatcgccaactgcactgtgaaagtggaccagctgggcagcgacgacatccacact
gccctcaagcagaccccgaaggtcctcgtggtccaatcatttgacatgttcaaagacaaa
gacttgaccggccccatgaatgagaaccacggacttaactacacacccctgctttactcc
cggggcaaccctggtatcatgtccccactggccaagaaaaagcttttgtctcaggtgagt
ggggccagcctctccagcagctatccctatggctccccaccccccttgatcagcaaaaag
aaacttatcgccagggacgaccagtcccaggcccaccacagccaaagctctgatcacatg
gccatcagccggccatccgtaatccaacatgtccagagcttcaaaaacaaggcctctgaa
gacaggaagagcatcaacgacatcttcaagcatgacaaactgagccggtctgacgcccac
cgctgtggcttctccaagcaccaactcggctccctggcggactcctacatcctgaaacaa
gaggcacaggagagcaaggataaactgttggagaaaagagcagtctcccacgcccacgtg
cccagtttgctggccgatttctactcctccccgcatctgcacagcctctaccggcacacg
gaacaccatcttcataacgaacagtccgctaagtatgccgctagggacgtgtaccaggaa
tcggaaaacggcgcctttctttctcacaagcacccagagaagatacacgtcaattatctc
gcatctctccatctgcaagataagaagctggctgcggcagaagcctctaccgatgagcaa
ccaacagatctgagccttcccaagaacccacataaactgaccagcaaagtcctgggcctg
gcccactcagcctcaggatcccaggagatcaaaggcacctcccagttccaggtcatcagc
agccagagccgagactgtcatcccaaagcctgccgggtatcacccatgaccatgtcggcc
cctaaaaaataccccgagtcacttgcgaggtcaggaaagcctcaccacgtgagactggag
aacttccggaaaatggaaggcatggtccatcccatcctgcaccggaagatgagcccacag
aacattggagctgctcgccccataaagcgcagtctggaggatttagatcttgtgatcgcc
gggaaaaaagccagggctgtgtctcccttggacccagccaaggaggcttctgggaaagaa
aaggcctccgaacaggagagcgagggcaacaaagcagcctacagtgggcattctggggct
gcatcggaaggtcacaaggtccccctctcctcccctatcttcccaggtttgtattctggt
agcctgtgtaactcaggcctcaactccaggctcccggccgggtactcccattctctgcag
tacttgaagaaccagacggtgctttctcctctcatgcagcccctggctttccactcgctt
gtgatgcaaagaggaatttttacatcgccaacaaattctcagcagctgtacagacacttg
gccgcagccaccccggtaggaagttcctacggggacctgttacacaatagcatctaccct
ttagctgctatcaaccctcaggccgccttcccgtcttctcagctgtcatccgtacacccc
agcacaaaactgtaa
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