Rattus norvegicus (rat): 309758
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Entry
309758 CDS
T01003
Symbol
Herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
309758 (Herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
309758 (Herc4)
Enzymes [BR:
rno01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
309758 (Herc4)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
HECT type E3
309758 (Herc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RLD
RCC1
HECT
RCC1_2
Alsin_RLD
Motif
Other DBs
NCBI-GeneID:
309758
NCBI-ProteinID:
NP_001012074
RGD:
1310971
Ensembl:
ENSRNOG00000061040
UniProt:
Q5PQN1
LinkDB
All DBs
Position
20:complement(25329005..25403443)
Genome browser
AA seq
1057 aa
AA seq
DB search
MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG
SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS
PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR
SQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIA
CGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIGSED
YFCVKRIFSGGDQSFSHYSSPQSCGPPDDFRRSDPSKQIWTVNEALIQKWLSYPSGRFPV
EIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHRLIQPDHPQISQ
QVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDCNNFTTIAIPFGTALVNLEKAP
LKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEIL
HRVNERTGQLIQYDKFYIHEVQELIDIRNDYINWVQQQAYGVDVSHGITELADIPVTICT
YPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPCLILVVRRENIVG
DAMEVLRKTKNIDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSR
LIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKKLLKRKPSLDDLKELMPD
VGRSMQQLLDYPEDDIEETFCLNFTITVENFGATEVKELVLNGADTAVNKQNRQEFVDAY
VDYIFNKSVASLFDAFHAGFHKVCGGKVLLLFQPNELQAMVIGNTNYDWKELEKNTEYKG
EYWAEHPTIKIFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLKLVIQSTGGGESYLP
VSHTCFNLLDLPKYTEKETLRCKLIQAIDHNEGFSLI
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctggggaaacgcatcctatggacaactaggtttgggtggaattgatgaagaa
attgtactagagcccaggaaaagtgactttttcgtaaataaaaaggtccgagatgtagga
tgtggactcagacatactgtgttcgtcctggacgacggaactgtgtacacatgtggatgt
aatgatctaggacagctaggtcatgaaaagtccagaaagaaaccagagcaggttgttgcc
ctggatgcccaaaatatcgtagctgtttcatgtggagaagctcatacattagcacttaat
gacaagggccaggtgtatgcttggggtctcgactctgatggacagcttggcctgcaagga
tcagaggaatgtatcagagtacccagaaatattaaaagtctttcggacatccagatagta
caggttgcatgtggttactatcattcacttgcactttctaaagcaagtgaagttttctgt
tggggacagaataaatatggccagctcggtctcggcattgaatgtcaaaagcaaacctca
ccacagctgattaagtctttgcttggaataccattcatgcaagtcgcagcaggaggagcc
catagttttgtactcaccctttctggagctatctttggatggggacgtaacaaatttggt
cagctaggtcttaatgatgagaacgataggtatgttcctaatttactaaagtcactaaga
tctcagaaaatagtttatatttgttgcggagaagatcatactgctgcattaaccaaggaa
ggtggagtgtttacctttggagctggaggctatggccagctgggtcataattctaccagt
catgaaataaaccccaggaaagtgtttgagcttatgggaagcattgttactcaaattgct
tgtggaaggcagcatacttctgcatttgttccttcttcaggacgaatttactccttcggt
ctcggtggtaatgggcagttgggaactggttcaacaagcaacagaaaaagccctttcact
gtaaaaggaaactggttttcttataatggacaatgtccacaagatattggttctgaagac
tatttctgtgtcaaaagaattttctcaggtggagatcaaagcttttcacattactctagt
cctcagagctgtggacctccagatgactttagacgctctgacccttcaaagcagatctgg
acagtgaatgaagctctgattcagaaatggctcagctacccctctggaaggttccctgtg
gagatagccaatgagatagatggaacattttcttcgtctggttgcctaaatggaagtttt
ctggctgttagcaatgatgatcactatagaacaggcaccagattttcaggggtcgacatg
aatgccgctagactcttattccacagactcatacagcctgaccacccgcagatatctcag
caggtggcagctagtttggaaaagaaccttatccctaaactgactagttccttacctgat
gttgaagctttgaggttttatcttaccctgccagagtgccccctgatgagtgactgcaac
aatttcacaaccatagcaatcccctttggcacagcccttgtgaacctagaaaaagcacca
ctgaaagtacttgaaaactggtggtcagtacttgaacctccactattcctcaagatagta
gaactttttaaggaagttgtggtacatcttttgaaactctacaagatcggcattccccct
tctgaaagaagaattttcaacagttttcttcataccgcattaaaggttttagaaatatta
catagggtaaatgagagaacaggacaacttatacagtacgacaagttttacatacatgaa
gtccaagagctgatagacataaggaatgactatatcaactgggtccagcagcaagcctat
ggagtggatgtcagccatggaataactgagttggcagatatccctgtgacaatttgtaca
tatccatttgtatttgatgcccaggcaaaaactactctgctacagacagacgcagtcttg
cagatgcagatggctattgaccaggcccataggcagaatgtctcctctctttttctgcca
gtgattgagtctgtgaatccttgcttaattctggttgttcgcagagaaaatattgtagga
gatgcaatggaagtcctcaggaaaaccaagaatatagattataaaaagccactcaaagtt
atatttgttggagaagatgctgttgatgctggaggtgtacgcaaagaatttttcttgctc
atcatgagggaattattggatcctaaatatggcatgtttcgatattatgaagattccagg
cttatttggttttcagataagacatttgaagacagtgatttgttccacttaattggtgtt
atctgtggattagcaatttataattttactattgtggacctccacttccctttggcttta
tataagaagctactgaaaaggaagccatccctggatgatctgaaagagctgatgccagat
gtagggagaagcatgcaacaattgctggactacccggaggacgatatagaggaaacattt
tgtctaaactttacgatcacagttgaaaattttggtgcaacagaagtgaaagagctggtt
ctgaatggtgcagacaccgctgttaacaaacagaatcggcaggagtttgttgatgcctat
gtggattacatattcaataaatcagtggcatctttatttgatgctttccatgccggcttt
cataaggtctgtggaggaaaagttcttctgctcttccagcccaatgaattacaagctatg
gttattgggaatacaaattatgattggaaagaactggagaagaatacagaatacaaagga
gagtattgggcagaacatcccacgataaaaattttttgggaagtatttcatgaattacca
ctagaaaagaagaaacaattcctattatttttgacaggtagtgatcgaattcctattctt
ggtatgaagagtctgaaactagtcatccagtcaacaggaggtggtgagagctatctcccg
gtttcccatacctgttttaatcttctagatctcccaaaatatacagagaaagaaacccta
cgatgtaaactgatccaagctattgatcacaatgaaggcttcagtttaatataa
DBGET
integrated database retrieval system
