Rattus norvegicus (rat): 310019
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Entry
310019 CDS
T01003
Symbol
Utp15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
310019 (Utp15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rno03009
]
310019 (Utp15)
Ribosome biogenesis [BR:
rno03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
310019 (Utp15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
NBCH_WD40
WD40_RFWD3
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_SCAP
Beta-prop_NWD2_C
WDR54
Beta-prop_LRRK2
Beta-prop_DCAF4
KNTC1_N
Beta-prop_IFT122_2nd
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
310019
NCBI-ProteinID:
NP_001101117
RGD:
1310992
Ensembl:
ENSRNOG00000016591
UniProt:
A2RRU3
A6I536
LinkDB
All DBs
Position
2:complement(31329222..31347022)
Genome browser
AA seq
528 aa
AA seq
DB search
MAGYKPVVIQTYPVLGEKITQDTLYWNNYKTPVQIKEFGAVSKVDFSPQPPYNYAVTASS
RIHIYGRYSQEPVKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDISGRAPLRQFEG
HTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLF
VTGSYDHTVKMFDARTNKNVLCVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQL
LVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKIYSTTSYKVVHSFDYAASILSLALSHQ
DETVVVGMTNGILSVKHRKSEAKKESLPRRRRPAYRTFIKGKIYTKQRDDIVVTRPAKKH
LEWYDRDLKSFRISKALDRVLEPNCVIKTPEVTVSIIKELNRRGVLANALAGRDEKEITR
VLNFLIRNLSQPRFAPVLINAAEIIIDIYLPVIGQSSVVDKKFIVLQGLVEKEIDYQREL
LETLGMMDMLFATMTRNGSAPVWEHVPAELPEEKTESPRQPSDTDKNS
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggctggttataaacctgtagtgattcagacatatcctgtacttggtgagaaaatcacc
caagacactctgtactggaacaactataagacccctgttcagattaaggaatttggtgca
gtgtccaaagtagacttttctcctcagcctccatataactatgccgtcacagcttcttca
aggatccacatttatggccggtactctcaagagcctgtaaaaaccttttcccgctttaag
gacacagcatactgtgctacttttcgtcaggatggtcagttgcttgtcgctggcagtgaa
gatggcgtggttcaactttttgatattagtgggagggctcccctcaggcaatttgaaggc
cacacaaaagcggttcatacagtagattttacagctgacaaatatcacgtggtctctgga
gccgatgactatactgttaaattatgggatattccaaactccaaagaaattctgacattc
aaagaacattctgactatgtgaggtgtggctgtgctagcaaactgaacccagaccttttt
gtaacaggatcatatgatcataccgtgaagatgtttgatgcccggacaaataaaaatgtt
ctctgtgtggagcatgggcagcctgtggagagtgtcctccttttcccctctggagggctt
ctggtgtctgcaggaggccgctacgttaaagtctgggacatgttaaaaggcgggcagctg
cttgtttctttgaaaaatcatcacaagacggtgacgtgtttatgtctgagcagctctgga
cagaggttactttccggctcactggacaggaaagtcaaaatctacagcaccacttcctac
aaagtcgtccacagctttgactatgcagcctcaatcttgagtctggcgctttctcatcaa
gatgagacggttgttgtaggaatgaccaatggaatactgagcgttaaacaccggaagtct
gaagcaaagaaggagtctcttcccaggagaaggaggcctgcatatcgaacctttattaaa
ggaaaaatttacacgaagcaacgggatgacattgtggtcactaggccagcgaagaagcac
ctagagtggtatgacagggatctgaaaagttttcggatctcaaaggccctcgacagagtc
ctcgagcctaactgtgtgataaagacccctgaggttacagtttccatcataaaggaactg
aatcggagaggcgtccttgccaacgctcttgcaggtcgggacgagaaggagattacccgg
gtccttaactttttgataaggaatctgtctcagccaagatttgcccccgttttgattaac
gctgctgaaataatcattgatatatatttacctgtaattggccagtcatcagtagtcgat
aaaaagtttatagtacttcaaggactcgtagaaaaagaaatcgattaccaaagagaactc
ctagaaaccttggggatgatggacatgctgtttgctaccatgacacggaatggcagcgcc
cctgtgtgggagcacgtgcctgctgaactcccagaggagaagacagagtcaccgaggcag
cccagtgacacagacaagaactcctaa
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