Rattus norvegicus (rat): 310090
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Entry
310090 CDS
T01003
Symbol
Ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
310090 (Ddx4)
Enzymes [BR:
rno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
310090 (Ddx4)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Gene silencing
piRNA pathway
310090 (Ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
310090
NCBI-ProteinID:
NP_001071115
RGD:
1308793
Ensembl:
ENSRNOG00000026686
UniProt:
Q64060
A0A8I5ZVB9
LinkDB
All DBs
Position
2:complement(45961174..46016097)
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AA seq
713 aa
AA seq
DB search
MGDEDWEAEILKPHVSSYVPVFEKDKYSSGANGDTFNRTSASSSEMEDGPSGRDHFMRSG
FSSGRNLGNRDIGESSKRETTSTTGGFGRGKGFGNRGFLNNKFEEGDSSGFWKESTNDCE
DTQTRSRGFSKRGGYPDGNDSEASGPFRRGGRDSEYDQDQGSQRGGGLFGSRKPAASDSG
SGDTFQSRSGNGRGGYKGLNEEVVTGSGKNSWKSEAEGGESSDIQGPKVTYIPPPPPEDE
DSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQ
KYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTR
ELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEKI
GLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGEF
LKSNYLFVAVGQVGGACRDVQQSILQVGQYSKREKLVEILRNIGDERTMVFVETKKKADF
IATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINF
DLPSTIDEYVHRIGRTGRCGNTGRAISFFDTESDNHLAQPLVKVLSDAQQDVPAWLEEIA
FSSYAPPSFSNSTRGAVFASVDTRKNFQGKNTLNTAGISSAQAPNPVDDESWD
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgaagattgggaggcagaaatcctcaaacctcatgtgtcttcctacgttcct
gtatttgagaaggataaatattcttctggggcaaatggagacacttttaacaggacttca
gcttcatcatcagaaatggaagatggaccttctggaagagatcatttcatgagaagtgga
ttttcctctggaagaaatttaggaaacagagatattggcgagtctagtaaaagagagact
acatctacaaccggtggctttggaagaggaaagggttttggaaacagaggttttttaaat
aacaagtttgaagaaggtgacagctctggtttctggaaagagtctactaatgactgtgaa
gatactcagactcggagcagagggttttccaagcgaggcggctatccagatgggaatgat
tcggaagcttcaggcccattcagaagaggtggaagagatagtgaatatgaccaagatcag
ggatcacagcgtggtggtggcctttttggttctaggaaaccagcagcaagtgattcaggc
agtggtgacactttccagagcagaagtgggaatggccgaggtggctacaaaggcttaaat
gaagaagtagtaacaggctctggaaagaattcttggaagtcagaagctgaaggaggcgaa
agcagtgatattcaaggtccaaaagtgacatatataccccctcctccaccagaggatgag
gactccatctttgcacattatcagacaggcataaactttgataaatatgataccatactt
gttgaagtatctggacatgatgcaccaccggcaattttgacttttgaagaagcgaatctc
tgccagaccctgaataacaacattgctaaggctggctataccaagctcactcctgtgcag
aagtacagcattcccattgtgttagcaggaagagatttgatggcttgtgctcaaacaggg
tctgggaagacggcagcttttctcttgcctattttggctcatatgatgagggatggaata
actgccagtcgctttaaagaactgcaggaaccagagtgtattattgtagcaccaactcga
gaattgatcaaccaaatttatttggaagccagaaaattttcttttgggacttgtgtaaga
gctgttgtcatatatggaggaacccagtttgggcactcaattcgacagatagtgcaaggg
tgtaatatattatgtgctactccagggaggctgatggatatcataggcaaagaaaagatt
ggtctcaaacaagtcaagtacttagttttggatgaagctgatcgaatgttggatatgggt
tttggacccgaaatgaagaagttaatttcttgtccaggaatgccatcaaaggaacagcgc
caaactcttttattcagtgcaacttttccagaagaaatccagaggttggctggcgagttt
ttaaagtcaaattatttgtttgttgctgttggacaagtgggaggagcttgcagagatgtg
cagcagtccattcttcaagttggccagtattcaaaaagagaaaaacttgttgagattcta
cgaaacataggtgatgaaagaactatggtctttgttgaaaccaagaaaaaagcagatttc
attgcgacttttctttgtcaagaaaaaatatcaactacaagtattcatggcgatcgggaa
cagagggagcgagaacaagctcttggagattttcgctgtggaaagtgcccagttcttgtt
gctacttcagtggctgccagaggacttgatattgaaaatgttcaacatgttatcaatttt
gaccttccttctaccattgatgaatatgttcatcgaattggacgtactggacgttgtgga
aatactggcagggcgatttctttttttgataccgaatctgataatcatttagcacaacct
ctagttaaagtactgtcagatgctcaacaggatgttcctgcgtggttagaagagattgcc
tttagttcatatgcgcctcccagcttcagtaatagcacaagaggggctgtgtttgcatct
gttgacactaggaagaatttccagggcaagaacacactgaacacagctgggatttcttct
gcacaagctcccaatccagttgatgacgagtcatgggattaa
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