KEGG   Rattus norvegicus (rat): 310511
Entry
310511            CDS       T01003                                 
Symbol
Rbbp4l1
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03082  ATP-dependent chromatin remodeling
rno03083  Polycomb repressive complex
rno04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    310511 (Rbbp4l1)
   03083 Polycomb repressive complex
    310511 (Rbbp4l1)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    310511 (Rbbp4l1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    310511 (Rbbp4l1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     310511 (Rbbp4l1)
  Histone modification proteins
   HAT complexes
    HATB complex
     310511 (Rbbp4l1)
   HDAC complexes
    Sin3A-HDAC complex
     310511 (Rbbp4l1)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     310511 (Rbbp4l1)
    PRC2.2
     310511 (Rbbp4l1)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     310511 (Rbbp4l1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    310511 (Rbbp4l1)
  Chromatin remodeling factors
   NuRD complex
    310511 (Rbbp4l1)
   NuRF complex
    310511 (Rbbp4l1)
   NuRF complex (fruit fly)
    310511 (Rbbp4l1)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz CAF1C_H4-bd WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd WD_LRWD1 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 ANAPC4_WD40 eIF2A WD40_RFWD3 MIOS_WD40 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_RIG_1st Beta-prop_DCAF4 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 310511
NCBI-ProteinID: XP_063138969
RGD: 1563620
Ensembl: ENSRNOG00000028052
LinkDB
Position
2:156268806..156270963
AA seq 424 aa
MADKEVAFEDVVEERVINEEYKIWKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDF
GIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASYYDSEKGEFGGFGSVSGKIEIEIKI
NYEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNSDLHLRGHQKEGY
GLSWNPYLSGYLLSASDDHTICLWDISAVPKEGKVVGAKTIFTGHTAVVEDVSWHLLHES
LFGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAEVNCLSFNPNSEFILASGSPDKTVALW
DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAED
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDPE
GQGS
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggctgacaaggaagtggcctttgaggacgtggtggaagaacgtgtgatcaacgaggag
tacaagatatggaagaacaccccatttctttatgatttggtgatgacccatgccctggag
tggcccagcctaactgcccagtggcttccagatgtgaccaggcctgaagggaaagatttc
ggcattcatcggcttgtcctgggaacacacacatcagatgaacaaaaccaccttgtgata
gccagtgtccagctccctaatgacgatgcgcagtttgatgcatcctattatgacagtgaa
aaaggagaatttggaggttttggttctgtcagtgggaaaattgaaatagaaatcaagata
aactatgaaggagaagtaaacagggccaggtacatgcctcagaacccttgcatcattgca
acgaagactccatccagtgatgttcttgtttttgactacacaaagcacccttctaaacca
gacccttctggagaatgcaactcagacttgcatctccgtgggcatcagaaggaaggttat
gggctttcttggaatccatatctcagcgggtacttacttagtgcttcagacgaccatacc
atctgcctgtgggacatcagtgcagttcccaaagaaggaaaagtggtgggtgcaaagacc
atctttacagggcacacagcagtagtggaggacgtttcctggcatctgctccatgagtct
ctgttcgggtcagttgctgatgaccaaaaactcatgatttgggatactcgttcaaacaat
acttccaagccaagccactcggttgatgcttacacagctgaagtgaattgcttatctttc
aatcctaatagtgagttcattcttgcctcgggatcacctgacaagactgttgccttgtgg
gatctgagaaatctgaaactcaagttgcattcctttgaatcacataaggatgaaatattc
caagttcaatggtcacctcacaatgagactatcttagcttccagtggcactgatcgtcgg
ctgaatgtctgggatctaagtaaaattggagaagaacagtccccagaagatgcagaggat
ggcccaccagagttgttgtttattcatggtggtcacactgctaagatatctgacttctcc
tggaatcccaatgaaccttgggtaatttgttctgtatcagaagacaatatcatgcaagtg
tggcagatggcagagaacatttataatgatgaagaccctgaaggaagtgtggatccagaa
ggacaaggatcctag

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