Rattus norvegicus (rat): 310588
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Entry
310588 CDS
T01003
Symbol
Tchh
Name
(RefSeq) trichohyalin
KO
K18626
trichohyalin
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rno04812
]
310588 (Tchh)
Cytoskeleton proteins [BR:
rno04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
310588 (Tchh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S_100
EF-hand_1
EF-hand_8
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
310588
NCBI-ProteinID:
NP_001385665
RGD:
1309635
LinkDB
All DBs
Position
2:181787109..181795463
Genome browser
AA seq
1592 aa
AA seq
DB search
MSPLIRSIVDITEVFNQYASQSCDGASLSKRELKNLLERELGDVLQKPHDPETVDLTLEL
LDRDCNGRVDFNEFLLFLFKIAQACYYALDQAAELGEKRTLTKEKRSLSQDRRQEDQRRF
EPRDRQLDEEPGRGSWQKRREQEERAEELRLEQRDRQHRDEEQQLQRRELQELEERLAEK
EPLSWSKGRDAEEFSEVEEQQRQERQELKGKGQTEERRLQRRRQEELREPLLRREQDLNR
RQELRQELRREPELRREQELSRGQEQRREQELRQELRREQELRREQVLRREQELRQEQRR
EQELRHEQELRQELRREQALAEEDEQTRVREPDQSITQRWQWQLESEAEARQNKVYSRPR
RQEQRLRQELEERQLREEEGQRRDLQRQRPAEEARQRYQWERPQRAEERLEQEQRFRDRE
EQRFREERLQRAELQDSLLEEEQRRRQAERREPNASWELREESQRRHTLYTKPSLRQRRE
EELREERLLQEEQRQQRERKYRREEDLQQEEERLQQDEEQLQREKRRLQQERQYQEEDLQ
LEEERLQQEEERLQRERRRLQQERQYQEEDLQRLQDEDRRRDLKWQWQPRKEVEVRSNRL
FTKRREDEETIQQLEDSREQGRRQDRRPLQNEQEERRELEQERRRLQQRDRQILEEEQLQ
REQQREARRRDETFQEEEQLLEESRRQQQEREGKFLEEERQLQTEREEQRRHQEQEREFR
EEEEERLQEPEKELRQERDRKSREEQERRQQREEEQLRRQERDRRFRREQEQRQETEEEQ
LRDRPFRREQERRQEREEEQLRDRKFRREQEPRQEREEEQLRDRKFRREQEPRQEREEEQ
LRDRKFRREQEPRQERVEEQLRDRKFRREQERFQEREEEQLRDRPFRREQERRQEREEEQ
LRDRPFRREQELRQEREEEQLRDRKFRREQERRREREEEQLRDRKFRREQERRREREEEQ
LRDRPFRREQERLQEREEEQLRDRPFHREQERRQEERDRPSRREQELLRELEEEQLRDRK
FRREQELRRDRKLREEEERRPELEEEQLRGQERDRLRVEEQLRQEREEEQRRRQERDRKS
REEQELRQELEEEQLRDRKFRREQELRRDRKLHDEERRQELEERQLSGQERERKFRLEQE
LRREREEEERRQQRDRKFRREEELRQELEEEQLRDRKIRREQELRRDRKFREEEERRQEE
FEEKQLRLQEPDRRFRREQELRREREEEQRRRQERDRKSREEQELRQELEEEQLRDRRIR
QELQEEELRRQERDSKFLEEQEIRRALQEEELRRQERDRKFREEQELRQELEEERLRDRK
IPREQEFRRPREEEQLRDRKFRREQEFRREPGVEQRRRQEREEEQIRFEEQQQRRQEREQ
QLRQERDRRVREEEELRQEREELLHREVGGRKFREEERFRQEREEQRRHLQERDNRRFRE
EVELRQEREEQQLRQERQERERKFREVEELRQEEEQRRRQEFDRKFREEKRLREEREGQQ
LRREKRDGQYPAEEQFARDKIRRQEQELRQEEEQRRRQERERKFQEEQIRRRQEEQRRRP
ILEPGTRQFANVPVRSSPLYEYIQEQRSQYRP
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atgtctccacttataagaagcattgttgatatcactgaagttttcaatcaatatgcatca
caaagttgtgatggagcatcgcttagcaagagagaactgaaaaacctccttgagagagaa
cttggagatgtccttcagaaaccacatgatccggagactgtagatctgaccctagaactt
ctggatcgtgactgcaacgggcgtgttgatttcaacgaattcctcctgttccttttcaag
attgctcaagcttgctattatgctctcgatcaggctgcagagttaggcgagaagagaacc
ctaaccaaggaaaagaggagcctgtcacaagatcgcaggcaagaagatcaaaggagattc
gagccccgggacagacaactggacgaagaacctgggcgcggaagctggcagaagagacgt
gagcaggaggagcgcgctgaggagctgaggctggagcagcgcgacaggcagcaccgcgac
gaagagcagcaactgcaaaggagagaactgcaagaactggaggagcgccttgcagaaaaa
gagcctctaagctggagtaagggtcgtgacgctgaggagttttctgaggtagaggaacag
caaaggcaagagagacaggaactcaagggcaagggccagacagaggagagaaggttgcag
aggcgccggcaagaagagctacgcgaacccctgctgaggcgcgagcaggatctgaatcgt
agacaggagctgaggcaggaactgaggcgcgaaccagagctaaggcgcgaacaggagctg
agtagaggacaggaacagaggcgcgagcaggagctgaggcaggaactgagacgcgagcag
gagctaaggcgcgagcaggtgctgaggcgcgagcaggagctgaggcaggaacagagacgc
gagcaggagctaagacacgagcaggagctgaggcaggagctcaggcgcgagcaggcgctg
gctgaggaggatgagcagacgcgagtccgggaacccgaccagagcatcacccagaggtgg
cagtggcagctcgaaagcgaggcagaagcccgtcagaacaaggtctactctaggcctcgc
aggcaagagcagaggcttcgccaggagctggaggagcgtcagctccgggaggaggagggg
caacgccgcgacctccaacggcagcgtcccgctgaggaggctcgccagcgttaccaatgg
gagaggccgcaacgggcggaggagcgcctggagcaggagcagcggttccgcgaccgggag
gagcagcgcttccgggaagagaggctgcaaagagctgagctccaggacagcctccttgag
gaagaacagaggcgacgtcaggcggagcgccgagagccaaacgcgagctgggagcttcgg
gaagaaagccagagacgccacacactgtacaccaaacccagcctgaggcagcgtagggag
gaagagctacgcgaggagcggttgttgcaagaagagcagcgccagcagcgggagaggaaa
taccgcagggaggaggatctgcagcaggaggaagagcggctgcagcaagatgaagagcaa
ctgcagcgggaaaagaggcgcctgcagcaggagaggcagtatcaagaggaggacctgcag
ctggaggaagagcggctgcagcaggaggaagagcggctgcagagagaaaggaggcgcctg
cagcaggagaggcagtatcaagaggaggacctgcagcggctgcaggatgaagatcggcgc
agggatctgaaatggcagtggcaacctaggaaagaagtcgaagttcgtagtaacaggctt
ttcaccaaacgcagagaggatgaggaaacgatccagcagctggaagactctcgagagcaa
gggagacgtcaggatcggcggcctctgcaaaacgaacaggaagagagaagagagctggag
caggagaggaggcgcctacagcagcgcgaccggcagatcctagaggaagagcagctgcag
cgagagcagcaacgggaagccagaagacgagatgagacgttccaggaggaagaacagctc
ctggaagaatcgagaagacagcaacaggagagagagggcaaattccttgaggaagaaagg
cagctgcagacggaacgggaagaacagaggcggcatcaagaacaagagagagaattccga
gaagaggaggaggagcgcctccaagaacctgagaaagaacttcggcaggagcgtgacaga
aaatcccgtgaagaacaagagcgccgccagcagcgtgaggaagagcagctgaggcgccag
gagcgggacagaagattccgccgggaacaagaacaacgccaggagactgaggaagagcag
ctgcgagacagaccattccgccgggaacaagaacgccgccaggagcgcgaggaagagcag
ctgcgggacagaaagttccgtcgagaacaagaaccccgtcaggagcgcgaggaagagcag
ctgcgggacagaaagttccgtcgggaacaagaaccccgtcaggagcgcgaggaagagcag
ctgcgggacagaaagttccgccgggaacaagaaccccgccaggagcgtgtggaagagcag
ctgcgggacagaaagttccgccgggaacaagaacgcttccaggagcgtgaggaagagcag
ctgagggacagaccattccgccgggaacaagaacgccgccaggagcgtgaggaagagcag
ctgcgggatagacctttccgccgggaacaagaactccgtcaggagcgtgaggaagagcag
ctgagggacagaaagttccgccgggaacaagaacgccgccgggagcgtgaagaagagcag
ctgagggacagaaagttccgccgggaacaagaacgccgccgggagcgtgaggaagagcag
ctgagggacagaccattccgcagggaacaagaacgcctccaggagcgtgaggaagagcag
ttgagggataggccattccaccgagaacaagaacgccgccaggaggagcgcgacagacca
tcccgccgggaacaagagctcctccgggaactcgaggaagagcagctgcgggacagaaag
ttccgccgggagcaagagctcagacgcgacagaaaactccgtgaggaagaagagcgccgc
ccggaactggaggaagagcagctgcgtggccaagagcgagaccgtttaagggtggaagag
caacttcgccaggagcgcgaggaagagcagcggcgccgccaggaacgtgacagaaaatcc
cgtgaggaacaagagctccgccaggaactcgaggaagagcagctgagggacagaaagttc
cgccgggaacaagagctcaggcgcgacagaaaactccacgacgaagagcgccgccaggag
ctagaggaaaggcagctgagcgggcaagaacgagagagaaagttccgcttggaacaagag
cttcgccgggagcgcgaggaagaggagcgccgccagcagcgtgacagaaagttccgccgg
gaagaggagctccgccaggaactggaggaagagcaactgcgggacagaaagatccgcagg
gaacaagagctcaggcgggacagaaaattccgtgaggaagaagagcgccgccaggaggag
ttcgaggaaaagcagctgcggctccaggaaccagacagaagattccgccgggaacaagag
ctccgccgggaacgcgaagaagagcagaggaggcgccaagaacgtgacagaaaatctcgt
gaggaacaagagctccgccaggaactggaggaagagcagctgagggacagaaggattcgc
caggaactccaggaagaagagctaaggcgccaggaacgtgacagtaagttccttgaggaa
caagaaatccgccgggcactccaggaagaagagctaaggcgccaggaacgtgacagaaag
ttccgtgaggaacaagagctccgccaagaactggaggaagagcggctgagggacagaaag
atcccccgagaacaagagttccgccggccgcgagaggaagagcagctgcgggacagaaag
ttccgcagggaacaagaattccgccgagagccgggggtagagcagcggcgccgccaggag
cgcgaagaggaacaaattcgctttgaggagcaacagcagcgccgccaggagcgcgagcaa
cagttaagacaagaacgcgacaggagagtccgggaggaagaagagcttcgtcaggaaagg
gaggagctgctacaccgtgaggtgggtggcaggaaattccgggaagaggagcgattccgc
caggaaagagaggaacagcggcgtcacctccaggagcgggacaacagaagattccgcgag
gaagtagagctcaggcaagaaagggaagagcagcagctgcgtcaagagcgccaagagcgt
gagagaaaattccgtgaggtagaagagcttcgccaggaagaagagcagcgccgccgccag
gagtttgacaggaaattccgggaagagaaacgcctgcgtgaggaacgcgagggccagcaa
ctgcggagggagaagcgagatggtcagtacccggctgaggagcaatttgccagggataag
attcgtcgccaggaacaagaactacgtcaagaagaggaacaaagacgtcgccaagagcgg
gagagaaaattccaagaagagcagatccgtcgtaggcaagaggagcagaggcgccgccca
atcctagagcctggcacacgccagtttgccaacgtcccagtgcgttccagtcctctctac
gagtacatccaagagcagaggtctcaataccgcccttaa
DBGET
integrated database retrieval system