Rattus norvegicus (rat): 310836
Help
Entry
310836 CDS
T01003
Symbol
Abca4
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
rno
Rattus norvegicus (rat)
Pathway
rno02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
310836 (Abca4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rno02000
]
310836 (Abca4)
Transporters [BR:
rno02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
310836 (Abca4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
AAA_22
SRP54
AAA_29
Motif
Other DBs
NCBI-GeneID:
310836
NCBI-ProteinID:
NP_001101191
RGD:
1309445
Ensembl:
ENSRNOG00000012892
UniProt:
A6HVF7
LinkDB
All DBs
Position
2:212849470..212986730
Genome browser
AA seq
2290 aa
AA seq
DB search
MGFLRQIQLLLWKNWTLRKRQKIRFVVELVWPLSLFLVLIWLRNANPLYSQHECHFPNKA
MPSAGMLPWLQGIFCNMNNPCFQNPTPGESPGTVSNYNNSILARLYRDFQELFMDTPEVQ
RLGRVWTELRTLSQLMDTLRTHPERFTGRGLPIRDILKDEETLTLFLKKNIGLSDSVAYL
LVNSQVRMEQFAYGVPDLELKDIACSEALLQRFIIFSQRWGAQAVRGALCPLSQVTLQWI
EDTLYADVDFFKLFRVLPTLLDSSSQGINLRFWGEILSDLSPRVQKFIHRPSVQDLLWVT
RPLLQNSGPETFTQLMGILSDLLCGYPEGGGSRVFSFNWYEDNNYKAFLGIDSTRRDPTY
SYDKRTTWRATKPLLMGKILFTPDSPAARRLLKNANSTFEELDRVRKLVKAWEEVGPQIW
YFFEKSTQMAVIRDTLQHPTVKDFINRQLGEEGITTEAILNFFPNGPRENQADDMTSFDW
RDIFNITDRFLRLANQYLECLVLDKFESYDDEVQLTQRALSLLEENRFWAGVVFPDMYPW
TSSLPPHVKYKIRMDIDVVEKTNKIKDRYWDSGPRADPVEDFRYIWGGFAYLQDMVEQGI
VRSQTPAEPPIGVYLQQMPYPCFVDDSFMIILNRCFPIFMVLAWIYSVSMTVKGIVLEKE
LRLKETLKNQGVSNAVIWCTWFLDSFSIMSMSIFLLTLFIMHGRILHYSDPFILFLFLLA
FATATIMQCFLFSTFFSKASLAAACSGVIYFTLYLPHILCFAWQDRMTADLKTTVSLLSP
VAFGFGTEYLVRFEEQGLGLQWSNIGKSPLEGDEFSFLLSMKMMLLDAALYGLLAWYLDQ
VFPGDYGTPLPWYFLLQESYWLGGEGCSTREERALEKTEPLTEEIEDPEYPEDSFFEREL
PGLVPGVCVKNLVKVFEPGSRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPP
TSGTVLIGGKDIEISLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEARLEM
EAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDSKVVVLDEPTSGVDPYSRRSIWD
LLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCFGTGFYLTLVRK
MKNIQSQRCGCEGACSCTSKGFSARCPARVDEITEEQVLDGDVKELTDLVYHHVPEAKLV
ECIGQELIFLLPNKNFKQRAYASLFRELEETLADLGLSSFGISDTPLEEIFLKVTEDSES
GSKFVGGTQQKREHTGLRHPCSAPVEKHRQHAQASHTCSPGQVDPPKGQPSPEPEDPGIP
FNTGARLILQHVQALLVKRFHHAVRSRKDFVAQIVLPATFVFLALMLSIIVPPFGEFPAL
TLHPWMYGHQFTFFSMDEPNNEHLEVLADVLLNRPGFGNRCLKEEWLPEYPCGNATSWKT
PSVSPNITHLFQKQKWTAAHPSPACKCSTREKLIMLPECPEGAGGLPPPQRIQRSTEVLQ
DLTNRNISDYLVKTYPALIRSSLKSKFWVNEQRYGGISIGGKLPDIPISGEALVGFLSDL
GQMMNVSGGPVTRESSREMLDFLKHLETKDNIKVWFNNKGWHALVSFLNVAHNAILRASL
PKDRDPEEYGITVISQPLNLTKEQLSEITVLTTSIDAVVAICVIFAMSFVPASFVLYLIQ
ERVTKAKHLQFISGVSPTTYWMTNFLWDIMNYAVSAGLVVGIFIGFQKKAYTSTDNLPAL
VTLLMLYGWAVIPMMYPASFLFDVPSTAYVALSCANLFIGINSSAITFVLELFENNRMLL
RFSATLRELLIVFPHFCLGRGLIDLALSQAVTDIYAQFGEEYSANPFQWDLIGKNLVAMA
IEGVVYFLLTLLIQHHFFLTRWIAEPAREPVFDEDDDVAEERQRVMSGGSKSDILKLNEL
TKVYSGSSSPAVDRLCVGVHPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATIAGKSI
LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPSKEIEKVANWGIQSLGLSLY
ADRLAGTYSGGNKRKLSTAIALTGCPPLLLLDEPTTGMDPQARRMLWNTIVNIIRQGRAV
VLTSHSMEECEALCTRLAIMVKGTFQCMGTIQHLKYKFGDGYIVTMKIKSPKDDLLPDLN
PVEQFFQGNFPGSVQRERHHSMLQFQVPSSSLARIFQLLISHKDSLLIEEYSVTQTTLDQ
VFVNFAKQQTETYDLPLHPRAAGASWQAKLEGKSGRLETQEPLPAGSSEHLANINNPTAV
ADNKHTRSPQ
NT seq
6873 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcctcagacagatacagcttttgctttggaagaactggactctgaggaaaagg
caaaagattcgctttgtagtggaactcgtgtggcctttgtctttgtttttggtgttaatc
tggctgaggaatgccaaccccctctacagtcaacatgaatgccactttcccaacaaggcg
atgccttcagcaggaatgttaccatggctccaggggattttctgcaatatgaacaaccct
tgttttcaaaaccccacccctggagaatctcccggaactgtatcaaactataataattcc
atcttggcaagactatatcgagattttcaagagctcttcatggacacaccggaggtccag
cgtcttggccgggtttggacagagctccgcaccttatctcagctcatggacaccctgcgg
actcaccctgagagatttacaggaagaggattaccaatccgagacatcctgaaagatgaa
gagacactgacactatttctcaagaaaaacattggcctgtctgactcagttgcctatctt
ctggtcaactcccaagttcgtatggaacagtttgcttatggagtcccagacttggaactg
aaagacattgcctgcagcgaggccctgttgcaacgcttcatcatcttcagccagcgttgg
ggggcacaggcggtacgcggtgccctgtgtcccctctcccaggtcaccctacagtggata
gaagacactctgtatgccgacgtggacttcttcaaactcttccgtgtgctccccacactc
cttgacagcagctctcaaggaatcaacttgagattttggggagaaatactgtctgatctg
tcaccaagagtgcaaaagtttatccatcggccaagtgttcaagacttgctgtgggtaacc
agacctcttctgcagaacagtggtcccgagaccttcacacagttgatgggcatcctgtct
gacctcctgtgtgggtacccagagggaggaggctctcgagtgttctccttcaactggtat
gaagacaataactataaggccttcctggggattgattccacaaggagagaccccacctat
tcttatgacaaaagaacaacctggagggcaacaaagccattgctgatgggaaaaatcctc
tttactccagattcccctgctgctcgaaggctgctgaagaacgccaactcaacttttgaa
gaactggatcgagttaggaagctggtcaaagcctgggaggaagtagggccccagatttgg
tacttctttgagaagagcacacagatggccgtgatcagagataccctgcagcacccaaca
gtaaaagacttcataaataggcagcttggagaagaaggcattaccactgaagccatatta
aatttcttccctaatggtccccgagagaaccaagctgatgacatgaccagctttgactgg
agggatatattcaacatcactgaccgcttcctgcgcctggctaatcaatacctggagtgt
ctggtcctggataagtttgaaagttacgatgatgaagttcagctcacccagcgagccctg
tctctcctggaggagaacaggttctgggctggagtggtattccctgacatgtatccgtgg
accagctccctacctccccatgtgaagtacaagattcggatggacattgatgtggtggag
aagaccaataagatcaaagacaggtactgggattctggtcccagggcagatcctgtcgaa
gatttccggtacatctggggaggctttgcctatctacaggacatggttgagcaaggaatc
gtgaggagtcagaccccggcagagcctccaattggagtctatctccagcagatgccttac
ccctgctttgtggatgactccttcatgatcatcctgaatcgctgtttccccatcttcatg
gtgctggcatggatctactctgtctccatgactgttaagggcattgtcttggaaaaggag
ctgaggctgaaggagaccttgaagaaccaaggtgtctctaacgctgtgatttggtgtact
tggttcctggacagcttctccattatgtcaatgagtatcttcctcctgacgctgttcatc
atgcacgggagaattctccattacagcgatcccttcattctcttcctgttcctattggcc
tttgccaccgcgaccatcatgcagtgcttcctgttcagtactttcttttccaaggccagc
ctcgccgcagcctgcagcggggtcatctacttcaccctctacctgccacacattctgtgc
tttgcgtggcaagaccggatgaccgccgacctgaagaccactgtgagcctgctttctccg
gtggcatttgggtttggcaccgagtacctggtccgctttgaagagcaaggcctgggactg
cagtggagcaacattgggaagagtcccctggaaggggatgagttcagtttcctgttgtct
atgaagatgatgctcctcgatgctgctctgtacggcttgcttgcttggtatcttgaccag
gttttcccaggagactatggcaccccacttccctggtacttccttctacaggagtcttac
tggcttggaggtgaaggttgttcgaccagagaagaaagggcactggaaaagactgaaccc
ttaacagaggaaatagaggatccggagtacccagaagactccttttttgaacgtgagctt
ccagggttggtgcctggagtgtgtgtgaagaacctggtgaaggtgtttgagcccggtagc
cggccagccgtggaccgccttaacatcactttctatgagaaccaaatcactgcattcctg
ggtcacaatggagccggaaaaaccaccaccttgtccatcctcacgggtctgttgccgcca
acatcaggaactgtgcttattgggggaaaagacattgaaatcagcctggatgcagtacgc
cagagcctgggcatgtgtccccaacacaacatcctgttccatcacctcacggtggctgag
catatcttgttctatgcccagctgaaagggaggtcctgggaggaggcccggcttgagatg
gaagccatgttagaagacacgggccttcaccacaagagaaacgaagaagctcaggacctt
tcagggggcatgcagaggaagctgtctgttgccattgcttttgtgggagattccaaggtg
gtggtcctggatgagcccacctctggggtggacccttactctagacgctccatctgggac
ctgctcctgaagtatcgctcaggtagaaccatcatcatgtccactcaccacatggatgag
gcagacctccttggtgaccgcattgccatcatttctcagggaaggctctactgctctggg
acgccactcttcctgaagaactgctttggcacaggcttctacttgaccttagttcgcaag
atgaaaaacatccagagccaaagatgtggctgtgagggggcctgcagctgtacatcaaag
ggtttctctgccaggtgtccagcccgagtcgatgagataacggaagaacaagtcttggat
ggggatgtgaaggagctgacagatttggtgtaccaccatgttccagaggcaaagctggtg
gaatgcattggccaagaacttatcttcctcctcccaaacaagaatttcaagcagagagca
tatgccagcctcttccgagagctggaggagactctggctgacctggggctcagcagcttt
ggaatttctgacactcccctggaagagattttcctgaaggtcacggaggattctgaatca
ggttctaagtttgtaggtggcacacagcagaagagagagcatactggtcttcggcatcct
tgttcggctcccgtcgagaagcacaggcagcatgcccaggcctcacatacctgttcccca
ggacaagtggatcctcccaagggccagccttccccagagccagaggaccccggtatccca
ttcaacacaggtgctcggctgatccttcagcatgtgcaggcactgctggtcaagcgattc
catcatgctgtccgcagccgcaaggattttgtggctcagattgttctccctgccactttt
gtgttcttggctctgatgctttccatcatcgtgcctccgtttggtgaattcccagctttg
acccttcacccctggatgtatgggcatcaatttaccttcttcagcatggatgaacccaac
aatgaacaccttgaagtactggcagatgtccttttgaacaggccaggttttggcaaccgt
tgtctaaaggaagagtggcttccggagtacccctgcggcaacgcaacctcctggaagacg
ccttccgtgtccccaaacatcacccacctgttccagaagcagaaatggacagcagcccac
ccttcgcccgcctgcaagtgcagcaccagagagaagctcatcatgctccccgaatgcccc
gagggtgctggggggctcccacccccacagaggatacagcgcagcacagaagtcctacaa
gacctcacgaacaggaacatctctgactacttggtaaaaacgtatcctgctctcatacga
agcagcttaaagagcaaattctgggtcaatgaacagaggtatggaggaatttccattgga
gggaagctccctgacatccccatcagcggggaagcacttgtgggcttcttaagtgacctg
ggccagatgatgaatgtgagcgggggtcctgtcaccagagagtcttccagagagatgtta
gatttcctcaaacacctcgaaaccaaagacaacattaaggtgtggtttaacaacaagggc
tggcatgccctggtcagcttcctgaacgtggctcacaacgccatcttgcgggccagcctg
cccaaggacagggacccggaagaatatggaatcaccgttatcagccagcctctgaacctg
accaaggagcagctctcagagatcacagtgctgactacttccatcgatgccgtggttgcc
atatgtgtgattttcgccatgtccttcgttccagccagctttgtcctctacctgatccag
gagagagtgacgaaagccaaacatttgcagtttatcagtggtgtgagccccaccacctac
tggatgaccaacttcctctgggacattatgaattatgctgtgagtgcgggactagtggtg
ggtatcttcattggatttcaaaagaaagcctacacatccacagacaaccttcctgcgctt
gtcactctgctcatgctgtatggatgggcagtcatcccaatgatgtatccagcgtccttc
ctgtttgacgtccccagcacagcctatgtggctttgtcttgtgctaacctgttcatcggc
atcaacagcagcgcaatcacatttgtcctggaactatttgagaataaccggatgctgctc
aggttcagtgccacgctgagggagttgctcattgtcttcccacacttctgcctgggcagg
ggcctcatcgacctggcactcagccaagctgtgacagacatctacgcccagtttggtgag
gagtactctgcaaacccattccagtgggacctgattgggaagaacctggttgctatggca
atagaaggggtggtgtacttccttctgaccctgctcatccaacaccactttttcctcacc
cggtggatcgctgagcctgctagagagcccgtttttgatgaagatgatgatgtggctgaa
gaaaggcaaagagttatgagtggaggaagtaaaagtgacatcttaaagctaaacgaacta
accaaggtttactcaggctcctccagtccagcagtagatcggttatgtgtcggcgtccac
cctggggagtgctttggcctcctgggagtgaatggtgcaggcaaaaccaccacattcaag
atgctcactggggacaccacagtgacatcaggggatgctaccatagcaggcaagagcatt
ttaactaatatttctgatgttcatcaaaacatgggctactgtcctcaattcgatgcaatt
gatgacctactcacaggccgggaacatctctacctctatgccaggctgcggggtgtgcca
tcgaaggaaattgagaaggttgccaactggggcatccaaagcctgggcttgtctctctac
gctgaccgcctagcgggcacctacagtggaggcaataagaggaaactctccacggccata
gcactcaccggctgcccgcccctgctgctgctggatgagcccacaacagggatggatcca
caggcccgccgcatgctgtggaataccattgtgaacatcatcagacaagggagagccgtg
gtgctcacctcccacagcatggaagagtgtgaagcactgtgcacgaggctggccatcatg
gtgaagggcacctttcagtgcatgggcaccattcaacacctcaagtacaagtttggagac
ggctacattgtcacaatgaaaatcaaatccccaaaggacgacttgcttcctgatttgaat
cctgtggagcagttcttccagggcaactttcctggcagcgtgcagagggagagacaccac
agcatgctccagttccaggtcccctcgtcctccctggccaggatcttccagctgctcatt
tcccacaaggacagcctgctcatcgaggagtactcagttacccagaccacactggaccag
gtatttgtaaacttcgccaaacagcagactgagacctatgacctccctctgcaccctcgg
gctgccggagccagctggcaagccaagctggaagggaaatccggacggctagagacacag
gagcctttacccgctggatcatctgaacacctggctaacataaacaaccccactgcagta
gcagataataagcacacgaggagtccgcagtga
DBGET
integrated database retrieval system
