Rattus norvegicus (rat): 311071
Help
Entry
311071 CDS
T01003
Symbol
Zeb2
Name
(RefSeq) zinc finger E-box-binding homeobox 2
KO
K23560
zinc finger homeobox protein 2
Organism
rno
Rattus norvegicus (rat)
Pathway
rno05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
311071 (Zeb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
311071 (Zeb2)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
311071 (Zeb2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
Teflon_C
zf-C2H2_15
zf-C2H2_2
zf-H2C2_5
zf-C2H2_6
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
311071
NCBI-ProteinID:
NP_001028873
RGD:
1307272
Ensembl:
ENSRNOG00000004677
UniProt:
Q3T921
E9PTC3
LinkDB
All DBs
Position
3:complement(49624028..49754323)
Genome browser
AA seq
1215 aa
AA seq
DB search
MKQPIMADGPRCKRRKQANPRRKNVVNYDNVVDAGSETDEEDKLHIAEDDGIANPLDQET
SPASMPNHESSPHMSQGLLPREEEEDEIRESVVEHSWHSGEILQASVDGPEEMKEDYDAL
GPEATIQTTINNGTVKNANCTSDFEEYFAKRKLEERDGHAVSIEEYLQRSDTAIIYPEAP
EELSRLGTPEANGQEENDLPPGTPDAFAQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEEN
FSCPLCSYTFAYRTQLERHMVTHKPGTDQHQMLTQGAGNRKFKCTECGKAFKYKHHLKEH
LRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLISVNGRMRNNIKTGSSPNSVSSS
PTNSAITQLRNKLENGKPLSMSEQTGLLKIKTEPLDFNDYKVLMATHGFSGTSPFMNGGL
GATSPLGVHPSAQSPMQHLGVGLEAPLLGFPTMNSNLSEVQKVLQIVDNTVSRQKMDCKT
EDISKLKGYHMKDPCSQPEEQGVTSPSIPAVGLPVVSHNGATKSIIDYTLEKVNEAKACL
QSLTTDSRRQISNIKKEKLRTLIDLVTDDKMIENHSIPTPFSCQFCKESFPGPIPLHQHE
RYLCKMNEEIKAVLQPHENIVPNKAGVFVDNKALLLSSVLSEKGLTSPINPYKDHMSVLK
AYYAMNMEPNSDELLKISIAVGLPQEFVKEWFEQRKVYQYSSSRSPSLERNSKPLAPNSN
PTTKDSLLPRSPVKPMDSITSPSIAELHNSVTSCDPPLRLTKSSHFTNIKAVDKLDHSRS
NTPSPLNLSSTSSKNSHSSSYTPNSFSSEELQAEPLDLSLPKQMREPKSIIATKNKTKAT
SISLDHNSVSSSSENSDEPLNLTFIKKEFSNSNNLDNKSTNPVFGMNPFSAKPLYTALPP
QSAFPPATFMPPVQTSIPGLRPYPGLDQMSFLPHMAYTYPTGAATFADMQQRRKYQRKQG
FQGELLDGAQDYMSGLDDLTDSDSCLSRKKIKKTESGMYACDLCDKTFQKSSSLLRHKYE
HTGKRPHQCQICKKAFKHKHHLIEHSRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSY
CKREAEEREAAEREAREKGHLEPTELLMNRAYLQSITPQGYSDSEERESMPRDGESEKEH
EKEGEEGYGKLRRRDGDEEEEEEEEESENKSMDTDPETIRDEEETGDHSMDDSSEDGKME
TKSDHEEDNMEDGME
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagccgatcatggcggatggcccccggtgcaagaggcgcaaacaagccaatccc
aggaggaaaaacgtggtgaactatgacaacgtagtggacgcaggttccgaaacagacgag
gaggacaagctgcacattgctgaggatgacggcattgcaaaccctctggaccaggagacg
agtccagctagcatgcccaaccacgagtcctccccacacatgagccaaggcctgctacca
agagaggaagaagaagacgagataagggagagcgttgtggaacacagctggcacagcggt
gagattctgcaagcctctgtagacggtccagaagaaatgaaggaggattatgatgctctg
gggccagaagccacgatccagaccacaattaacaatggtacagttaagaatgcaaattgc
acatcagactttgaggaatactttgccaaaagaaaactggaggaaagagatggccacgca
gtcagcattgaagagtaccttcagcgaagcgacacggccattatttacccagaagcccct
gaggagctgtctcgccttggcacgccagaggccaatgggcaagaagaaaatgacctgcca
cctggaactccagatgcttttgcccaactgctgacctgcccctactgcgaccgcggctac
aagcgcttgacatcgctgaaggagcacatcaagtaccgccacgagaagaatgaagagaac
ttttcctgccctctttgtagctacacgttcgcctaccgcacccagctcgaaaggcatatg
gtgacgcacaagccagggacagatcagcaccaaatgctaacccaaggagcaggtaaccgc
aagttcaagtgcacagagtgtggcaaggccttcaagtacaagcaccacctgaaagaacac
ctgagaattcacagtggtgaaaaaccttacgaatgccccaactgcaagaaacgcttctct
cattctggttcctacagttcacatatcagcagcaagaaatgtattggtttaatctcagta
aatggccgaatgagaaacaatatcaagacgggttcttcccctaattctgtttcttcttct
cctactaactcagccattactcaactaaggaacaagttggaaaatggaaaaccacttagc
atgtctgagcagacgggcttacttaagattaaaacagaaccactagacttcaatgactat
aaagttcttatggcaacacatgggtttagtggcactagtccctttatgaacggtgggctt
ggagccaccagccctttaggtgtgcacccatctgctcagagtccaatgcagcacttaggt
gtagggttagaagcccctttacttggatttcccactatgaatagtaatctgagtgaggta
caaaaggttctacagattgtggataatacggtttctaggcaaaagatggactgcaaaact
gaagacatttcaaagttgaaaggttaccacatgaaggatccatgttctcagccagaagaa
caaggggttacttctcctagtattccagccgtcggtcttccagtagtgagtcataatggt
gccactaaaagtatcattgactataccttagagaaagtcaacgaagccaaagcttgcctc
cagagcttgactactgactcaaggagacagatcagtaatataaagaaagagaagctacgt
actttgatagatttggtcaccgatgataaaatgattgagaaccacagcatacccactccg
ttttcatgccagttctgtaaagaaagcttcccaggtcctatccccctgcatcagcatgaa
cgctacctgtgtaaaatgaatgaagagatcaaggcggtcctgcaacctcacgaaaacata
gtccccaacaaagctggggtgttcgttgacaataaagccctcctcttgtcatctgtactt
tctgagaaaggactgacaagcccgatcaacccgtacaaggaccacatgtctgtactcaaa
gcatactatgctatgaatatggaacccaactctgatgaactgctgaaaatctccattgct
gtgggccttcctcaggagtttgtgaaggaatggtttgagcagagaaaagtctaccagtac
tccagttccaggtcaccatcactggagaggaactccaagcccttagctcccaacagcaac
cccaccacaaaagactctttgttacccaggtctcctgtaaaacctatggactcaatcacg
tcaccatctatagcagaactccacaacagtgtcacgagttgtgatcctcctctcaggcta
acaaaatcttcccacttcaccaatattaaagcagttgataaactggaccactcaaggagt
aacactccttctcctttgaatctttcttccacgtcttctaaaaactcccacagtagctcg
tacactccaaatagcttctcttccgaggagctgcaggctgagccgttggacctgtcatta
ccaaaacaaatgagagagcccaaaagtattatagccacaaagaacaagacgaaagctact
agcataagtttagaccacaacagtgtttcttcatcctctgaaaactcagatgaacctctg
aatttgacttttatcaagaaagagttttcaaattctaataacctggacaataaaagcact
aaccctgtgttcggcatgaacccatttagtgccaagcctttatacacagctcttccacca
cagagcgcatttccccctgccactttcatgccaccagtccagaccagcatccccgggcta
cgaccatacccagggctggatcagatgagcttcctaccacatatggcctatacctaccca
acgggagcagctacctttgctgatatgcagcaaaggaggaaataccagcggaaacaagga
tttcagggagaattgcttgatggagcacaagactacatgtcgggcctagatgacttgaca
gactccgattcctgtctgtctcgaaagaagataaagaagacagaaagtggcatgtatgca
tgtgacttatgtgacaagacattccagaaaagcagttcccttctgcgacataaatacgaa
cacacaggaaagagaccacaccagtgtcagatttgtaagaaagcgttcaaacacaaacac
caccttatcgagcactcgaggctgcactcgggcgagaagccctatcagtgtgacaaatgt
ggcaagcgcttttcacactcgggctcctactcgcagcacatgaatcacaggtactcctac
tgcaagcgggaggcggaggagcgggaagcggccgagcgcgaggcacgagagaaagggcac
ttggaacccaccgagctgctgatgaaccgggcttacttgcagagcatcacccctcagggg
tactctgactcggaggagagggagagcatgccgagggatggcgagagcgagaaggagcac
gagaaggagggcgaggagggctatgggaagctgcggagaagggacggcgacgaggaggaa
gaggaggaagaggaagaaagtgaaaataaaagtatggatacggatcccgagacgatacgg
gatgaggaggagactggggatcactcaatggatgacagttcagaggatgggaaaatggaa
accaaatcagaccacgaggaagacaatatggaagacggcatggaataa
DBGET
integrated database retrieval system
