Rattus norvegicus (rat): 311404
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Entry
311404 CDS
T01003
Symbol
Ap4e1
Name
(RefSeq) AP-4 complex subunit epsilon-1
KO
K12400
AP-4 complex subunit epsilon-1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
311404 (Ap4e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
311404 (Ap4e1)
Membrane trafficking [BR:
rno04131
]
Endosome - Golgi transport
Others
AP-4 complex
311404 (Ap4e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP4E_app_platf
Cnd1
Coatomer_b_Cpla
Coatamer_beta_C
Motif
Other DBs
NCBI-GeneID:
311404
NCBI-ProteinID:
NP_001178671
RGD:
1562199
Ensembl:
ENSRNOG00000022938
UniProt:
D3ZX21
LinkDB
All DBs
Position
3:134726338..134792820
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AA seq
1130 aa
AA seq
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MSDMVERTLTALPGLFLQNQLGGPAASRAPFFSRLGGLIRGVTALSSKHEEEKLIQQELS
SLKATVSAPTTTLKMMKECMVRLIYCEMLGYDASFGYIHAIKLAQQGNLLEKRVGYLAVS
LFLHESHELLLLLVNTVVKDLQSTNLVEVCMALTVVSQIFPREMIPAVLPLIEEKLQHSK
EIIRRKAVLALYKFYLIAPNQVQHIHTKFRKALCDRDVGVMAASLHIYLRMIKENSSGYK
DLTESFVTILKQVVGGKLPVEFSYHSVPAPWLQIQLLRILGLLGKDDERTSELMYDVLDE
SLRRAELNHNVTYAILFECVHTIYSIYPKSELLEKAAKCIGKFVLSPKINLKYLGLKALT
YVIQQDPSLALQHQITIIECLDHPDPIIKRETLELLYRITNAQNVVVIVQKMLEYLHQSK
EEYIIINLVGKIAELAEKYAPDNVWFIQTMNAVFSVGGDVMHPDILSNFLRLLAEGFDDE
TEDQQLRLYAVQSYLTLLDMENTFYPQRFLQVMSWVLGEYSYLLDRESPEAVMTRLYKLL
RSDSISSETKAWLFAAVTKLTPQAHSSPIVENLIQEFTVSLNTCLRQHAFELKHLHENEE
LMKSLLQSAQNCDDIMADASLSFLDGFVAEGLSQGAAPYKPRHQRQEEQLSQEKVLNFEP
YGLSFSSSGFTGRQSPAGVSLGSDISGNSAETGLKEAGSLKMDGIKKLWGKEGYLPKKES
GAADKLEAAHAPAESAMMENVDQAMTRKDQAQGHTPSTEEKEKQLLASSLFVGLGPENTI
NLLGKADVVSYKFRRKSKPKVAQSDKMPSAHAAPSSTLSPVSDVAGGDEDSLSAADRGDG
ELGSELLGSESVLELPSVENLSSVSLPVSSLFAGNDMEVFHPPSSSATSAVKEVSLAALL
EETPECRRSALVEICSNETVAVSSYKVWKDECLLLVCSVTSKTDSEFTDAQLEIFPLENF
KIIEQPGCPSPVMEAESTKSFQYGVQMESPCVEGTLSGFIKYQMMDTHPVQLEFSMNLSL
LDFIRPLKISTEDFGKLWLSFANDVKQNIKISEPRVALASVLTELQQKLRLCVVDVIGSE
GLLACKLLPSTPCILHCRVHADVVALWFRSSSSVLSDCLSCHCQKVMQTS
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatggtggagaggacgctgaccgcactgccggggctcttcttgcagaaccag
ctgggagggcctgcggcctccagagcacccttcttctccaggctgggcggcctcatccgt
ggcgtcactgcgctctcatccaagcacgaagaagagaagttaatccagcaggaactgagt
agtctgaaggcgactgtttctgctcctactacaacactgaaaatgatgaaggaatgtatg
gtgagacttatatactgtgagatgcttggatacgatgcttcttttggttatatacatgca
atcaagttggcccaacaaggaaacctcttagaaaaaagagtgggttatttggctgtttct
ctgtttctacatgaaagtcatgaacttttgcttctccttgtgaatacagtggtaaaggac
ctgcagagcactaatctggtagaagtgtgtatggcactcactgtcgtcagccagattttc
cctcgagaaatgattccagctgtccttccactaatagaagagaaactccaacattctaag
gagattatacgaagaaaagcagttctggcattatacaaattttatctcattgcccctaat
caagtacagcatatccatactaagtttcggaaagcactctgtgacagagatgttggggtc
atggctgcctctttgcatatataccttaggatgattaaggaaaattcttctggatataaa
gacttgactgagagttttgtaacaattttaaagcaggtggtggggggaaagctccctgta
gagttcagttaccacagtgtgccagcgccatggttacagattcagctcttgagaatactg
ggactgctgggaaaagacgatgaaaggacaagtgaactaatgtatgatgttcttgatgaa
tccttacgaagagccgagttaaatcacaatgtcacttacgctattctgtttgagtgtgta
cacacaatctattctatttatcctaaatcagaattacttgagaaggctgccaagtgcatt
ggaaaatttgttctgtcacctaaaataaacctcaaatatttaggactgaaggctcttacc
tatgttatccagcaggatccttctctggctcttcaacaccagataaccataattgaatgc
ctagaccaccctgatcccattattaaaagagagactctggaacttctttacagaattaca
aatgcacagaatgtagtagttattgtacagaaaatgcttgaatatttacatcagagcaaa
gaagagtacatcatcatcaacttagtcggcaaaatagctgaattggctgagaaatatgct
cctgacaacgtgtggttcattcagacgatgaatgctgtgttttcagtgggaggagatgta
atgcacccagacattctcagtaactttctgagactgctagcagaaggttttgatgatgaa
acagaagatcaacagttaagactctatgcagttcagtcttacctcaccttactagacatg
gaaaacactttctatccacagagatttcttcaagttatgagttgggtattaggagagtat
tcctacctcttagatagagaaagccccgaggcagttatgaccaggctctacaagttactg
aggagtgactccatttcttcagaaacgaaagcatggttgtttgctgcagtaaccaagtta
acacctcaagctcattcttctcccatagttgagaacttaatccaagaattcactgtatcc
ttgaatacttgtctgagacaacatgcatttgaattgaaacatctacatgaaaatgaagag
cttatgaagagcttgcttcagagtgctcagaattgtgacgacatcatggcagatgcttct
ttatcttttctggatggttttgtggctgaaggactcagtcagggagcagcaccttataag
ccccgtcaccagcgccaagaggagcagctctctcaggaaaaagttctcaattttgaacca
tatggactatcattttcttcatctggcttcactggacgacagtctcctgctggcgtttct
ctgggctcagatatatctggaaacagtgctgaaacagggctgaaagaggcaggtagcctg
aagatggacggcataaagaaattatggggtaaagaaggttatctccccaagaaggagagt
ggagctgctgataaactggaagccgcacatgctcctgcagagagtgcaatgatggagaat
gtagaccaagccatgactaggaaggaccaagctcaaggccacaccccttctacagaggag
aaagaaaagcagctgttggcatcatcgctgtttgttgggctaggaccagaaaatacgatc
aatttgttgggaaaagcagatgttgtgtcttacaagttcaggaggaagtcaaaacccaag
gtagcccaaagtgacaagatgcccagcgctcatgccgctccctcctccacccttagccct
gtgtccgatgtggctgggggggatgaggacagtctgagcgctgcggatagaggagacggg
gagcttggttcagagctgttgggttctgagtctgtcttggagctgccctcagttgaaaac
ctctcgagtgtcagcttgcccgtgtcttctttgtttgcgggtaacgacatggaagtattt
catcccccttcatcctctgcaacttcagccgtcaaggaagtcagtttggctgctctgttg
gaagaaactcctgaatgcaggcgttcagctctcgtggaaatctgtagtaatgaaactgtg
gctgtgtcttcttacaaagtctggaaggatgagtgtttattgctggtgtgctcagtcact
agtaagactgattcagagttcacagatgctcaattagaaatttttcctttggaaaatttc
aagatcattgagcagcctggatgtccttcacctgtgatggaagcagaaagcaccaaatcc
ttccaatatggcgtgcagatggaaagcccttgtgtagaggggactctctctggttttata
aagtatcaaatgatggatacacatcctgttcaactggaattttccatgaacttatcacta
ctagattttattaggccattaaagatctcaactgaagactttggcaaactctggttgtct
tttgcaaatgatgtgaagcaaaatataaaaatatcagagcctcgagttgcactggcttct
gtcctgacagagctgcagcagaaactcagactttgcgtggttgacgtcataggcagtgaa
ggtctgctggcctgtaagctgcttccgtccaccccctgtatcctgcactgccgagtacac
gctgacgtggtagccctgtggttccgatcctctagctctgttctttcagactgtttatct
tgtcactgtcagaaagtgatgcagacatcctag
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